RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 TMEM57Q8N5G2 664 aa17.4■□□□□ 0.38
BNIP3-202ENST00000540159 MLH3Q9UHC1 1453 aa17.4■□□□□ 0.38
BNIP3-202ENST00000540159 CAMSAP1Q5T5Y3 1602 aa17.4■□□□□ 0.38
BNIP3-202ENST00000540159 NGEFQ8N5V2 710 aa17.4■□□□□ 0.38
BNIP3-202ENST00000540159 EMILIN1Q9Y6C2 1016 aa17.4■□□□□ 0.38
BNIP3-202ENST00000540159 IQSEC2Q5JU85 1478 aa17.39■□□□□ 0.38
BNIP3-202ENST00000540159 LMTK2Q8IWU2 1503 aa17.39■□□□□ 0.37
BNIP3-202ENST00000540159 FAM69CQ0P6D2 419 aa17.39■□□□□ 0.37
BNIP3-202ENST00000540159 HDGFL2Q7Z4V5 671 aaPredicted RBP17.39■□□□□ 0.37
BNIP3-202ENST00000540159 PLEKHF1Q96S99 279 aa17.39■□□□□ 0.37
BNIP3-202ENST00000540159 PHACTR3Q96KR7 559 aa17.38■□□□□ 0.37
BNIP3-202ENST00000540159 SETBP1Q9Y6X0 1596 aa17.38■□□□□ 0.37
BNIP3-202ENST00000540159 MYO3AQ8NEV4 1616 aa17.38■□□□□ 0.37
BNIP3-202ENST00000540159 RRS1Q15050 365 aaKnown RBP17.37■□□□□ 0.37
BNIP3-202ENST00000540159 LNPKQ9C0E8 428 aa17.37■□□□□ 0.37
BNIP3-202ENST00000540159 UPF2Q9HAU5 1272 aaKnown RBP17.37■□□□□ 0.37
BNIP3-202ENST00000540159 TXNDC2Q86VQ3 553 aa17.36■□□□□ 0.37
BNIP3-202ENST00000540159 NEXMIFQ5QGS0 1516 aa17.36■□□□□ 0.37
BNIP3-202ENST00000540159 DCTN1Q14203 1278 aa17.36■□□□□ 0.37
BNIP3-202ENST00000540159 NME9Q86XW9 330 aa17.36■□□□□ 0.37
BNIP3-202ENST00000540159 SLC52A1Q9NWF4 448 aa17.36■□□□□ 0.37
BNIP3-202ENST00000540159 MYO5BQ9ULV0 1848 aa17.36■□□□□ 0.37
BNIP3-202ENST00000540159 ATF7IPQ6VMQ6 1270 aa17.36■□□□□ 0.37
BNIP3-202ENST00000540159 CCDC27Q2M243 656 aa17.35■□□□□ 0.37
BNIP3-202ENST00000540159 ABCC11Q96J66 1382 aa17.35■□□□□ 0.37
BNIP3-202ENST00000540159 FAM83GA6ND36 823 aa17.34■□□□□ 0.37
BNIP3-202ENST00000540159 TSPYL6Q8N831 410 aa17.34■□□□□ 0.37
BNIP3-202ENST00000540159 ARHGEF28Q8N1W1 1705 aaKnown RBP17.34■□□□□ 0.37
BNIP3-202ENST00000540159 ZC3H13Q5T200 1668 aaKnown RBP17.34■□□□□ 0.37
BNIP3-202ENST00000540159 YTHDC2Q9H6S0 1430 aaKnown RBP17.33■□□□□ 0.37
BNIP3-202ENST00000540159 TBC1D2Q9BYX2 928 aa17.32■□□□□ 0.36
BNIP3-202ENST00000540159 POLKQ9UBT6 870 aa17.32■□□□□ 0.36
BNIP3-202ENST00000540159 NEURL4Q96JN8 1562 aa17.32■□□□□ 0.36
BNIP3-202ENST00000540159 BECN1Q14457 450 aa17.32■□□□□ 0.36
BNIP3-202ENST00000540159 GZF1Q9H116 711 aaPredicted RBP17.32■□□□□ 0.36
BNIP3-202ENST00000540159 PIK3C2BO00750 1634 aa17.31■□□□□ 0.36
BNIP3-202ENST00000540159 DIP2CQ9Y2E4 1556 aa17.31■□□□□ 0.36
BNIP3-202ENST00000540159 NINLQ9Y2I6 1382 aa17.31■□□□□ 0.36
BNIP3-202ENST00000540159 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.3■□□□□ 0.36
BNIP3-202ENST00000540159 DDX19BQ9UMR2 479 aa17.29■□□□□ 0.36
BNIP3-202ENST00000540159 TBC1D32Q96NH3 1257 aa17.29■□□□□ 0.36
BNIP3-202ENST00000540159 FOXD4L1Q9NU39 408 aa17.29■□□□□ 0.36
BNIP3-202ENST00000540159 ATAD2Q6PL18 1390 aa17.29■□□□□ 0.36
BNIP3-202ENST00000540159 APBB1O00213 710 aa17.28■□□□□ 0.36
BNIP3-202ENST00000540159 PTPRMP28827 1452 aa17.28■□□□□ 0.36
BNIP3-202ENST00000540159 NSD2O96028 1365 aa17.28■□□□□ 0.36
BNIP3-202ENST00000540159 KRT24Q2M2I5 525 aa17.27■□□□□ 0.36
BNIP3-202ENST00000540159 CD163L1Q9NR16 1453 aa17.27■□□□□ 0.36
BNIP3-202ENST00000540159 ANKRD45Q5TZF3 282 aa17.27■□□□□ 0.36
BNIP3-202ENST00000540159 C22orf23Q9BZE7 217 aa17.27■□□□□ 0.36
BNIP3-202ENST00000540159 RSPH6AQ9H0K4 717 aa17.26■□□□□ 0.35
BNIP3-202ENST00000540159 ANO8Q9HCE9 1232 aaPredicted RBP17.25■□□□□ 0.35
BNIP3-202ENST00000540159 TSPOAP1O95153 1857 aa17.25■□□□□ 0.35
BNIP3-202ENST00000540159 NLRP1Q9C000 1473 aa17.24■□□□□ 0.35
BNIP3-202ENST00000540159 AEBP1Q8IUX7 1158 aa17.24■□□□□ 0.35
BNIP3-202ENST00000540159 ZBTB40Q9NUA8 1239 aa17.24■□□□□ 0.35
BNIP3-202ENST00000540159 ESF1Q9H501 851 aaKnown RBP17.23■□□□□ 0.35
BNIP3-202ENST00000540159 MBIPQ9NS73 344 aa17.23■□□□□ 0.35
BNIP3-202ENST00000540159 FCHSD2O94868 740 aa17.22■□□□□ 0.35
BNIP3-202ENST00000540159 C8orf58Q8NAV2 365 aa17.22■□□□□ 0.35
BNIP3-202ENST00000540159 CFAP74Q9C0B2 1584 aa17.22■□□□□ 0.35
BNIP3-202ENST00000540159 IPO8O15397 1037 aaKnown RBP17.22■□□□□ 0.35
BNIP3-202ENST00000540159 COL3A1P02461 1466 aaPredicted RBP17.21■□□□□ 0.35
BNIP3-202ENST00000540159 NEO1Q92859 1461 aa17.21■□□□□ 0.35
BNIP3-202ENST00000540159 PUS7Q96PZ0 661 aaKnown RBP17.21■□□□□ 0.35
BNIP3-202ENST00000540159 PLEKHG5O94827 1062 aa17.21■□□□□ 0.35
BNIP3-202ENST00000540159 MIS18AQ9NYP9 233 aa17.21■□□□□ 0.35
BNIP3-202ENST00000540159 KIF16BQ96L93 1317 aa17.2■□□□□ 0.34
BNIP3-202ENST00000540159 NUDT16Q96DE0 195 aaKnown RBP17.2■□□□□ 0.34
BNIP3-202ENST00000540159 NFE2L2Q16236 605 aa17.2■□□□□ 0.34
BNIP3-202ENST00000540159 VAMP4O75379 141 aa17.19■□□□□ 0.34
BNIP3-202ENST00000540159 METP08581 1390 aa17.19■□□□□ 0.34
BNIP3-202ENST00000540159 LRRC7Q96NW7 1537 aa17.19■□□□□ 0.34
BNIP3-202ENST00000540159 TWISTNBQ3B726 338 aaPredicted RBP17.19■□□□□ 0.34
BNIP3-202ENST00000540159 MCM10Q7L590 875 aa17.19■□□□□ 0.34
BNIP3-202ENST00000540159 COG3Q96JB2 828 aa17.19■□□□□ 0.34
BNIP3-202ENST00000540159 ALKQ9UM73 1620 aa17.19■□□□□ 0.34
BNIP3-202ENST00000540159 WASLO00401 505 aaPredicted RBP17.19■□□□□ 0.34
BNIP3-202ENST00000540159 ANTXR1Q9H6X2 564 aa17.19■□□□□ 0.34
BNIP3-202ENST00000540159 TMEM131LA2VDJ0 1609 aa17.18■□□□□ 0.34
BNIP3-202ENST00000540159 HDAC1Q13547 482 aaPredicted RBP17.18■□□□□ 0.34
BNIP3-202ENST00000540159 ADGRB2O60241 1585 aa17.18■□□□□ 0.34
BNIP3-202ENST00000540159 CHD1LQ86WJ1 897 aa17.18■□□□□ 0.34
BNIP3-202ENST00000540159 USP32Q8NFA0 1604 aa17.18■□□□□ 0.34
BNIP3-202ENST00000540159 PPIP5K1Q6PFW1 1433 aa17.18■□□□□ 0.34
BNIP3-202ENST00000540159 SMC5Q8IY18 1101 aa17.17■□□□□ 0.34
BNIP3-202ENST00000540159 RBM42Q9BTD8 480 aaKnown RBP17.17■□□□□ 0.34
BNIP3-202ENST00000540159 PREX1Q8TCU6 1659 aa17.17■□□□□ 0.34
BNIP3-202ENST00000540159 SULT6B1Q6IMI4 303 aa17.17■□□□□ 0.34
BNIP3-202ENST00000540159 ARHGAP31Q2M1Z3 1444 aa17.17■□□□□ 0.34
BNIP3-202ENST00000540159 ARHGEF40Q8TER5 1519 aa17.16■□□□□ 0.34
BNIP3-202ENST00000540159 RIMS2Q9UQ26 1411 aa17.16■□□□□ 0.34
BNIP3-202ENST00000540159 CT47B1P0C2W7 299 aaPredicted RBP17.16■□□□□ 0.34
BNIP3-202ENST00000540159 IL13P35225 146 aa17.16■□□□□ 0.34
BNIP3-202ENST00000540159 SLC26A8Q96RN1 970 aa17.16■□□□□ 0.34
BNIP3-202ENST00000540159 PNNQ9H307 717 aaKnown RBP17.16■□□□□ 0.34
BNIP3-202ENST00000540159 RICTORQ6R327 1708 aa17.16■□□□□ 0.34
BNIP3-202ENST00000540159 MRPL50Q8N5N7 158 aaKnown RBP17.15■□□□□ 0.34
BNIP3-202ENST00000540159 ZBTB7BO15156 539 aaPredicted RBP17.15■□□□□ 0.34
BNIP3-202ENST00000540159 AAMPQ13685 434 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms