RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 FBXO41Q8TF61 875 aa21.15■□□□□ 0.98
DDB1-216ENST00000539739 NSD3Q9BZ95 1437 aa21.15■□□□□ 0.98
DDB1-216ENST00000539739 SBNO1A3KN83 1393 aa21.15■□□□□ 0.98
DDB1-216ENST00000539739 TTC21AQ8NDW8 1320 aa21.15■□□□□ 0.98
DDB1-216ENST00000539739 PXDNQ92626 1479 aa21.15■□□□□ 0.98
DDB1-216ENST00000539739 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.15■□□□□ 0.98
DDB1-216ENST00000539739 LRRC59Q96AG4 307 aaKnown RBP21.14■□□□□ 0.97
DDB1-216ENST00000539739 MON2Q7Z3U7 1717 aa21.13■□□□□ 0.97
DDB1-216ENST00000539739 SSH2Q76I76 1423 aa21.13■□□□□ 0.97
DDB1-216ENST00000539739 CGNL1Q0VF96 1302 aa21.13■□□□□ 0.97
DDB1-216ENST00000539739 LMOD2Q6P5Q4 547 aa21.12■□□□□ 0.97
DDB1-216ENST00000539739 PER1O15534 1290 aaPredicted RBP21.11■□□□□ 0.97
DDB1-216ENST00000539739 ABTB2Q8N961 1025 aa21.11■□□□□ 0.97
DDB1-216ENST00000539739 SPATA31A3Q5VYP0 1347 aa21.11■□□□□ 0.97
DDB1-216ENST00000539739 PHLPP1O60346 1717 aa21.11■□□□□ 0.97
DDB1-216ENST00000539739 TNS3Q68CZ2 1445 aa21.1■□□□□ 0.97
DDB1-216ENST00000539739 ARHGEF10O15013 1369 aa21.09■□□□□ 0.97
DDB1-216ENST00000539739 HSPA1LP34931 641 aa21.08■□□□□ 0.97
DDB1-216ENST00000539739 NRKQ7Z2Y5 1582 aa21.08■□□□□ 0.97
DDB1-216ENST00000539739 TRPM3Q9HCF6 1732 aaPredicted RBP21.08■□□□□ 0.97
DDB1-216ENST00000539739 NME9Q86XW9 330 aa21.07■□□□□ 0.96
DDB1-216ENST00000539739 FYB1O15117 783 aa21.07■□□□□ 0.96
DDB1-216ENST00000539739 NLRP6P59044 892 aa21.07■□□□□ 0.96
DDB1-216ENST00000539739 NLRP13Q86W25 1043 aa21.07■□□□□ 0.96
DDB1-216ENST00000539739 COL16A1Q07092 1604 aaPredicted RBP21.05■□□□□ 0.96
DDB1-216ENST00000539739 AMER1Q5JTC6 1135 aaPredicted RBP21.05■□□□□ 0.96
DDB1-216ENST00000539739 NUTM2GQ5VZR2 741 aa21.05■□□□□ 0.96
DDB1-216ENST00000539739 COG3Q96JB2 828 aa21.05■□□□□ 0.96
DDB1-216ENST00000539739 GGNBP2Q9H3C7 697 aa21.05■□□□□ 0.96
DDB1-216ENST00000539739 NSD2O96028 1365 aa21.04■□□□□ 0.96
DDB1-216ENST00000539739 USP31Q70CQ4 1352 aa21.03■□□□□ 0.96
DDB1-216ENST00000539739 NPC1L1Q9UHC9 1359 aa21.03■□□□□ 0.96
DDB1-216ENST00000539739 ALS2Q96Q42 1657 aa21.02■□□□□ 0.96
DDB1-216ENST00000539739 CC2D1BQ5T0F9 858 aaKnown RBP21.01■□□□□ 0.95
DDB1-216ENST00000539739 ZRANB1Q9UGI0 708 aa21.01■□□□□ 0.95
DDB1-216ENST00000539739 JCADQ9P266 1359 aa21.01■□□□□ 0.95
DDB1-216ENST00000539739 PIK3C2AO00443 1686 aa21.01■□□□□ 0.95
DDB1-216ENST00000539739 PNPLA6Q8IY17 1366 aa21■□□□□ 0.95
DDB1-216ENST00000539739 CNGB1Q14028 1251 aaPredicted RBP21■□□□□ 0.95
DDB1-216ENST00000539739 PLEKHG5O94827 1062 aa21■□□□□ 0.95
DDB1-216ENST00000539739 KIF20BQ96Q89 1820 aa20.99■□□□□ 0.95
DDB1-216ENST00000539739 MORC1Q86VD1 984 aa20.99■□□□□ 0.95
DDB1-216ENST00000539739 HAP1P54257 671 aaPredicted RBP20.98■□□□□ 0.95
DDB1-216ENST00000539739 OVOS2A0A0J9YW53 1432 aa20.98■□□□□ 0.95
DDB1-216ENST00000539739 OVOS2Q6IE36 1432 aa20.98■□□□□ 0.95
DDB1-216ENST00000539739 USP19O94966 1318 aa20.97■□□□□ 0.95
DDB1-216ENST00000539739 KCNH5Q8NCM2 988 aa20.97■□□□□ 0.95
DDB1-216ENST00000539739 CABLES1Q8TDN4 633 aa20.96■□□□□ 0.95
DDB1-216ENST00000539739 GCP02774 474 aa20.95■□□□□ 0.94
DDB1-216ENST00000539739 MED1Q15648 1581 aaPredicted RBP20.94■□□□□ 0.94
DDB1-216ENST00000539739 SOX12O15370 315 aa20.93■□□□□ 0.94
DDB1-216ENST00000539739 DIEXFQ68CQ4 756 aaKnown RBP20.93■□□□□ 0.94
DDB1-216ENST00000539739 USP54Q70EL1 1684 aa20.93■□□□□ 0.94
DDB1-216ENST00000539739 COL22A1Q8NFW1 1626 aaPredicted RBP20.93■□□□□ 0.94
DDB1-216ENST00000539739 SPATA31A6Q5VVP1 1343 aa20.93■□□□□ 0.94
DDB1-216ENST00000539739 SHPRHQ149N8 1683 aa20.93■□□□□ 0.94
DDB1-216ENST00000539739 ANP32CO43423 234 aa20.93■□□□□ 0.94
DDB1-216ENST00000539739 TNNT2P45379 298 aaPredicted RBP20.93■□□□□ 0.94
DDB1-216ENST00000539739 RALBP1Q15311 655 aa20.92■□□□□ 0.94
DDB1-216ENST00000539739 SLIT3O75094 1523 aa20.91■□□□□ 0.94
DDB1-216ENST00000539739 ANKRD26Q9UPS8 1709 aa20.91■□□□□ 0.94
DDB1-216ENST00000539739 NUTM2BA6NNL0 878 aaPredicted RBP20.91■□□□□ 0.94
DDB1-216ENST00000539739 NUTM2EB1AL46 878 aaPredicted RBP20.91■□□□□ 0.94
DDB1-216ENST00000539739 NUTM2AQ8IVF1 878 aaPredicted RBP20.91■□□□□ 0.94
DDB1-216ENST00000539739 ZC3H6P61129 1189 aaKnown RBP20.89■□□□□ 0.93
DDB1-216ENST00000539739 PRKRIP1Q9H875 184 aaPredicted RBP20.89■□□□□ 0.93
DDB1-216ENST00000539739 MARF1Q9Y4F3 1742 aaKnown RBP20.88■□□□□ 0.93
DDB1-216ENST00000539739 AATKQ6ZMQ8 1374 aa20.88■□□□□ 0.93
DDB1-216ENST00000539739 PARD3Q8TEW0 1356 aa20.88■□□□□ 0.93
DDB1-216ENST00000539739 PHRF1Q9P1Y6 1649 aaKnown RBP20.87■□□□□ 0.93
DDB1-216ENST00000539739 FBLN1P23142 703 aa20.86■□□□□ 0.93
DDB1-216ENST00000539739 ZBTB7CA1YPR0 619 aa20.86■□□□□ 0.93
DDB1-216ENST00000539739 RRS1Q15050 365 aaKnown RBP20.86■□□□□ 0.93
DDB1-216ENST00000539739 ARHGEF25Q86VW2 580 aa20.86■□□□□ 0.93
DDB1-216ENST00000539739 CRYBG1Q9Y4K1 1723 aa20.85■□□□□ 0.93
DDB1-216ENST00000539739 NFAT5O94916 1531 aa20.85■□□□□ 0.93
DDB1-216ENST00000539739 ADAMTS2O95450 1211 aa20.85■□□□□ 0.93
DDB1-216ENST00000539739 ILDR1Q86SU0 546 aaPredicted RBP20.85■□□□□ 0.93
DDB1-216ENST00000539739 PRDM11Q9NQV5 511 aa20.85■□□□□ 0.93
DDB1-216ENST00000539739 CPDO75976 1380 aa20.84■□□□□ 0.93
DDB1-216ENST00000539739 KIAA0232Q92628 1395 aa20.84■□□□□ 0.93
DDB1-216ENST00000539739 ABCA3Q99758 1704 aa20.84■□□□□ 0.93
DDB1-216ENST00000539739 AMPHP49418 695 aa20.83■□□□□ 0.93
DDB1-216ENST00000539739 POLKQ9UBT6 870 aa20.83■□□□□ 0.93
DDB1-216ENST00000539739 MAP3K19Q56UN5 1328 aa20.83■□□□□ 0.93
DDB1-216ENST00000539739 PPM1GO15355 546 aaPredicted RBP20.82■□□□□ 0.92
DDB1-216ENST00000539739 PPP2R1AP30153 589 aa20.82■□□□□ 0.92
DDB1-216ENST00000539739 MYBBP1AQ9BQG0 1328 aaKnown RBP20.82■□□□□ 0.92
DDB1-216ENST00000539739 MEX3CQ5U5Q3 659 aaKnown RBP20.82■□□□□ 0.92
DDB1-216ENST00000539739 EMILIN1Q9Y6C2 1016 aa20.82■□□□□ 0.92
DDB1-216ENST00000539739 KIF24Q5T7B8 1368 aa20.8■□□□□ 0.92
DDB1-216ENST00000539739 MTHFSP49914 203 aa20.8■□□□□ 0.92
DDB1-216ENST00000539739 CHRNA2Q15822 529 aa20.8■□□□□ 0.92
DDB1-216ENST00000539739 FAM83GA6ND36 823 aa20.79■□□□□ 0.92
DDB1-216ENST00000539739 RTL1A6NKG5 1358 aa20.79■□□□□ 0.92
DDB1-216ENST00000539739 MAP2P11137 1827 aaKnown RBP20.79■□□□□ 0.92
DDB1-216ENST00000539739 IP6K1Q92551 441 aa20.78■□□□□ 0.92
DDB1-216ENST00000539739 FLT4P35916 1363 aa20.78■□□□□ 0.92
DDB1-216ENST00000539739 LRP6O75581 1613 aa20.78■□□□□ 0.92
DDB1-216ENST00000539739 HOXC9P31274 260 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms