RNA–Protein interactions for RNA: ENST00000534091.1

LDLRAD3-206, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-206ENST00000534091 POTEAQ6S8J7 498 aa13.84□□□□□ -0.19
LDLRAD3-206ENST00000534091 CDK12Q9NYV4 1490 aaPredicted RBP13.84□□□□□ -0.19
LDLRAD3-206ENST00000534091 EVC2Q86UK5 1308 aa13.84□□□□□ -0.19
LDLRAD3-206ENST00000534091 CCER2I3L3R5 266 aa13.83□□□□□ -0.2
LDLRAD3-206ENST00000534091 FNBP4Q8N3X1 1017 aaPredicted RBP13.83□□□□□ -0.2
LDLRAD3-206ENST00000534091 NGDNQ8NEJ9 315 aaKnown RBP13.83□□□□□ -0.2
LDLRAD3-206ENST00000534091 AFF2P51816 1311 aa13.83□□□□□ -0.2
LDLRAD3-206ENST00000534091 ALS2Q96Q42 1657 aa13.82□□□□□ -0.2
LDLRAD3-206ENST00000534091 XPCQ01831 940 aaPredicted RBP13.82□□□□□ -0.2
LDLRAD3-206ENST00000534091 PMFBP1Q8TBY8 1022 aa13.82□□□□□ -0.2
LDLRAD3-206ENST00000534091 NGLY1Q96IV0 654 aa13.81□□□□□ -0.2
LDLRAD3-206ENST00000534091 C8orf37Q96NL8 207 aa13.81□□□□□ -0.2
LDLRAD3-206ENST00000534091 POLR3GLQ9BT43 218 aa13.81□□□□□ -0.2
LDLRAD3-206ENST00000534091 KTN1Q86UP2 1357 aaKnown RBP13.81□□□□□ -0.2
LDLRAD3-206ENST00000534091 SRPK2P78362 688 aaKnown RBP13.8□□□□□ -0.2
LDLRAD3-206ENST00000534091 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.8□□□□□ -0.2
LDLRAD3-206ENST00000534091 ATAD2Q6PL18 1390 aa13.8□□□□□ -0.2
LDLRAD3-206ENST00000534091 ADAMTS2O95450 1211 aa13.79□□□□□ -0.2
LDLRAD3-206ENST00000534091 RXRBP28702 533 aa13.79□□□□□ -0.2
LDLRAD3-206ENST00000534091 PRKRIP1Q9H875 184 aaPredicted RBP13.79□□□□□ -0.2
LDLRAD3-206ENST00000534091 TRPC5Q9UL62 973 aaPredicted RBP13.79□□□□□ -0.2
LDLRAD3-206ENST00000534091 NINLQ9Y2I6 1382 aa13.79□□□□□ -0.2
LDLRAD3-206ENST00000534091 RBM6P78332 1123 aaKnown RBP13.78□□□□□ -0.2
LDLRAD3-206ENST00000534091 ACEP12821 1306 aa13.78□□□□□ -0.2
LDLRAD3-206ENST00000534091 PPIP5K1Q6PFW1 1433 aa13.78□□□□□ -0.2
LDLRAD3-206ENST00000534091 ABCA3Q99758 1704 aa13.78□□□□□ -0.2
LDLRAD3-206ENST00000534091 PER1O15534 1290 aaPredicted RBP13.77□□□□□ -0.21
LDLRAD3-206ENST00000534091 HAP1P54257 671 aaPredicted RBP13.77□□□□□ -0.21
LDLRAD3-206ENST00000534091 ZNF692Q9BU19 519 aaPredicted RBP13.77□□□□□ -0.21
LDLRAD3-206ENST00000534091 QTRT2Q9H974 415 aaKnown RBP13.77□□□□□ -0.21
LDLRAD3-206ENST00000534091 USP21Q9UK80 565 aa13.77□□□□□ -0.21
LDLRAD3-206ENST00000534091 NWD2Q9ULI1 1742 aa13.77□□□□□ -0.21
LDLRAD3-206ENST00000534091 SLIT2O94813 1529 aa13.76□□□□□ -0.21
LDLRAD3-206ENST00000534091 NPC1L1Q9UHC9 1359 aa13.76□□□□□ -0.21
LDLRAD3-206ENST00000534091 ATRNO75882 1429 aa13.75□□□□□ -0.21
LDLRAD3-206ENST00000534091 LMOD2Q6P5Q4 547 aa13.75□□□□□ -0.21
LDLRAD3-206ENST00000534091 CABP2Q9NPB3 220 aa13.75□□□□□ -0.21
LDLRAD3-206ENST00000534091 CRYBG1Q9Y4K1 1723 aa13.75□□□□□ -0.21
LDLRAD3-206ENST00000534091 BCL9LQ86UU0 1499 aa13.74□□□□□ -0.21
LDLRAD3-206ENST00000534091 PANK3Q9H999 370 aa13.74□□□□□ -0.21
LDLRAD3-206ENST00000534091 PARD3Q8TEW0 1356 aa13.73□□□□□ -0.21
LDLRAD3-206ENST00000534091 PAK3O75914 559 aaPredicted RBP13.73□□□□□ -0.21
LDLRAD3-206ENST00000534091 UNC5CLQ8IV45 518 aa13.73□□□□□ -0.21
LDLRAD3-206ENST00000534091 COL14A1Q05707 1796 aaKnown RBP13.73□□□□□ -0.21
LDLRAD3-206ENST00000534091 USP6P35125 1406 aa13.73□□□□□ -0.21
LDLRAD3-206ENST00000534091 RALBP1Q15311 655 aa13.72□□□□□ -0.21
LDLRAD3-206ENST00000534091 NLRP13Q86W25 1043 aa13.72□□□□□ -0.21
LDLRAD3-206ENST00000534091 CABP1Q9NZU7 370 aa13.72□□□□□ -0.21
LDLRAD3-206ENST00000534091 AKAP12Q02952 1782 aa13.71□□□□□ -0.21
LDLRAD3-206ENST00000534091 CPSF1Q10570 1443 aaKnown RBP13.71□□□□□ -0.22
LDLRAD3-206ENST00000534091 SSH2Q76I76 1423 aa13.71□□□□□ -0.22
LDLRAD3-206ENST00000534091 ANKRD36BQ8N2N9 1353 aa13.71□□□□□ -0.22
LDLRAD3-206ENST00000534091 USP19O94966 1318 aa13.7□□□□□ -0.22
LDLRAD3-206ENST00000534091 TTC21AQ8NDW8 1320 aa13.7□□□□□ -0.22
LDLRAD3-206ENST00000534091 PLCH1Q4KWH8 1693 aa13.7□□□□□ -0.22
LDLRAD3-206ENST00000534091 ABTB2Q8N961 1025 aa13.7□□□□□ -0.22
LDLRAD3-206ENST00000534091 PHRF1Q9P1Y6 1649 aaKnown RBP13.7□□□□□ -0.22
LDLRAD3-206ENST00000534091 VPS72Q15906 364 aa13.69□□□□□ -0.22
LDLRAD3-206ENST00000534091 CABLES1Q8TDN4 633 aa13.69□□□□□ -0.22
LDLRAD3-206ENST00000534091 GJD4Q96KN9 370 aaPredicted RBP13.69□□□□□ -0.22
LDLRAD3-206ENST00000534091 ANKRD26Q9UPS8 1709 aa13.69□□□□□ -0.22
LDLRAD3-206ENST00000534091 CPDO75976 1380 aa13.69□□□□□ -0.22
LDLRAD3-206ENST00000534091 AMER1Q5JTC6 1135 aaPredicted RBP13.68□□□□□ -0.22
LDLRAD3-206ENST00000534091 KNSTRNQ9Y448 316 aa13.68□□□□□ -0.22
LDLRAD3-206ENST00000534091 MON2Q7Z3U7 1717 aa13.67□□□□□ -0.22
LDLRAD3-206ENST00000534091 MYBBP1AQ9BQG0 1328 aaKnown RBP13.67□□□□□ -0.22
LDLRAD3-206ENST00000534091 RGS12O14924 1447 aa13.67□□□□□ -0.22
LDLRAD3-206ENST00000534091 FAM83GA6ND36 823 aa13.67□□□□□ -0.22
LDLRAD3-206ENST00000534091 CD163L1Q9NR16 1453 aa13.67□□□□□ -0.22
LDLRAD3-206ENST00000534091 KIF20BQ96Q89 1820 aa13.67□□□□□ -0.22
LDLRAD3-206ENST00000534091 HDGFL2Q7Z4V5 671 aaPredicted RBP13.66□□□□□ -0.22
LDLRAD3-206ENST00000534091 PRDM11Q9NQV5 511 aa13.66□□□□□ -0.22
LDLRAD3-206ENST00000534091 TERF2IPQ9NYB0 399 aa13.66□□□□□ -0.22
LDLRAD3-206ENST00000534091 NRAPQ86VF7 1730 aa13.66□□□□□ -0.22
LDLRAD3-206ENST00000534091 NSD2O96028 1365 aa13.66□□□□□ -0.22
LDLRAD3-206ENST00000534091 NRKQ7Z2Y5 1582 aa13.66□□□□□ -0.22
LDLRAD3-206ENST00000534091 NSD3Q9BZ95 1437 aa13.65□□□□□ -0.22
LDLRAD3-206ENST00000534091 SLIT3O75094 1523 aa13.65□□□□□ -0.22
LDLRAD3-206ENST00000534091 ONECUT3O60422 494 aaPredicted RBP13.65□□□□□ -0.22
LDLRAD3-206ENST00000534091 SLC12A5Q9H2X9 1139 aa13.65□□□□□ -0.22
LDLRAD3-206ENST00000534091 TTC21BQ7Z4L5 1316 aa13.64□□□□□ -0.23
LDLRAD3-206ENST00000534091 USP54Q70EL1 1684 aa13.64□□□□□ -0.23
LDLRAD3-206ENST00000534091 GLI3P10071 1580 aa13.64□□□□□ -0.23
LDLRAD3-206ENST00000534091 A0A1W2PP64 1363 aa13.64□□□□□ -0.23
LDLRAD3-206ENST00000534091 GCP02774 474 aa13.64□□□□□ -0.23
LDLRAD3-206ENST00000534091 KCNH5Q8NCM2 988 aa13.64□□□□□ -0.23
LDLRAD3-206ENST00000534091 TMC1Q8TDI8 760 aa13.64□□□□□ -0.23
LDLRAD3-206ENST00000534091 CARD14Q9BXL6 1004 aa13.64□□□□□ -0.23
LDLRAD3-206ENST00000534091 EDC4Q6P2E9 1401 aaKnown RBP13.64□□□□□ -0.23
LDLRAD3-206ENST00000534091 PIK3C2AO00443 1686 aa13.63□□□□□ -0.23
LDLRAD3-206ENST00000534091 KIAA0232Q92628 1395 aa13.63□□□□□ -0.23
LDLRAD3-206ENST00000534091 NLRP6P59044 892 aa13.63□□□□□ -0.23
LDLRAD3-206ENST00000534091 BTG4Q9NY30 223 aa13.63□□□□□ -0.23
LDLRAD3-206ENST00000534091 USP31Q70CQ4 1352 aa13.62□□□□□ -0.23
LDLRAD3-206ENST00000534091 ABCC6O95255 1503 aa13.62□□□□□ -0.23
LDLRAD3-206ENST00000534091 LMO7Q8WWI1 1683 aa13.61□□□□□ -0.23
LDLRAD3-206ENST00000534091 CCDC125Q86Z20 511 aa13.61□□□□□ -0.23
LDLRAD3-206ENST00000534091 MRS2Q9HD23 443 aa13.61□□□□□ -0.23
LDLRAD3-206ENST00000534091 CGNL1Q0VF96 1302 aa13.61□□□□□ -0.23
LDLRAD3-206ENST00000534091 AATKQ6ZMQ8 1374 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms