RNA–Protein interactions for RNA: ENST00000533056.5

CHID1-221, Transcript of chitinase domain containing 1, humanhuman

TSL 3

Gene CHID1, Length 752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-221ENST00000533056 PHF8Q9UPP1 1060 aa13.11□□□□□ -0.31
CHID1-221ENST00000533056 NRKQ7Z2Y5 1582 aa13.11□□□□□ -0.31
CHID1-221ENST00000533056 ACEP12821 1306 aa13.11□□□□□ -0.31
CHID1-221ENST00000533056 AFF2P51816 1311 aa13.11□□□□□ -0.31
CHID1-221ENST00000533056 PMFBP1Q8TBY8 1022 aa13.1□□□□□ -0.31
CHID1-221ENST00000533056 C8orf37Q96NL8 207 aa13.1□□□□□ -0.31
CHID1-221ENST00000533056 CARD14Q9BXL6 1004 aa13.1□□□□□ -0.31
CHID1-221ENST00000533056 TERF2IPQ9NYB0 399 aa13.1□□□□□ -0.31
CHID1-221ENST00000533056 PER1O15534 1290 aaPredicted RBP13.09□□□□□ -0.31
CHID1-221ENST00000533056 RXRBP28702 533 aa13.09□□□□□ -0.31
CHID1-221ENST00000533056 USP6P35125 1406 aa13.09□□□□□ -0.31
CHID1-221ENST00000533056 SSH2Q76I76 1423 aa13.09□□□□□ -0.31
CHID1-221ENST00000533056 NSD3Q9BZ95 1437 aa13.08□□□□□ -0.32
CHID1-221ENST00000533056 HDGFL2Q7Z4V5 671 aaPredicted RBP13.08□□□□□ -0.32
CHID1-221ENST00000533056 SOS2Q07890 1332 aaPredicted RBP13.08□□□□□ -0.32
CHID1-221ENST00000533056 KTN1Q86UP2 1357 aaKnown RBP13.07□□□□□ -0.32
CHID1-221ENST00000533056 EDC4Q6P2E9 1401 aaKnown RBP13.07□□□□□ -0.32
CHID1-221ENST00000533056 ADAMTS2O95450 1211 aa13.07□□□□□ -0.32
CHID1-221ENST00000533056 NGDNQ8NEJ9 315 aaKnown RBP13.07□□□□□ -0.32
CHID1-221ENST00000533056 UPF1Q92900 1129 aaKnown RBP eCLIP13.07□□□□□ -0.32
CHID1-221ENST00000533056 ZNF692Q9BU19 519 aaPredicted RBP13.07□□□□□ -0.32
CHID1-221ENST00000533056 TRPM3Q9HCF6 1732 aaPredicted RBP13.05□□□□□ -0.32
CHID1-221ENST00000533056 PXDNQ92626 1479 aa13.05□□□□□ -0.32
CHID1-221ENST00000533056 FOXO3O43524 673 aa13.05□□□□□ -0.32
CHID1-221ENST00000533056 QTRT2Q9H974 415 aaKnown RBP13.05□□□□□ -0.32
CHID1-221ENST00000533056 BRD4O60885 1362 aaPredicted RBP13.05□□□□□ -0.32
CHID1-221ENST00000533056 AMER1Q5JTC6 1135 aaPredicted RBP13.04□□□□□ -0.32
CHID1-221ENST00000533056 NGLY1Q96IV0 654 aa13.04□□□□□ -0.32
CHID1-221ENST00000533056 NPHP3Q7Z494 1330 aa13.04□□□□□ -0.32
CHID1-221ENST00000533056 NPC1L1Q9UHC9 1359 aa13.04□□□□□ -0.32
CHID1-221ENST00000533056 CDK12Q9NYV4 1490 aaPredicted RBP13.04□□□□□ -0.32
CHID1-221ENST00000533056 XPCQ01831 940 aaPredicted RBP13.03□□□□□ -0.32
CHID1-221ENST00000533056 KNSTRNQ9Y448 316 aa13.03□□□□□ -0.32
CHID1-221ENST00000533056 TTC21BQ7Z4L5 1316 aa13.03□□□□□ -0.32
CHID1-221ENST00000533056 RGS12O14924 1447 aa13.03□□□□□ -0.32
CHID1-221ENST00000533056 PIK3C2AO00443 1686 aa13.02□□□□□ -0.32
CHID1-221ENST00000533056 KIF20BQ96Q89 1820 aa13.02□□□□□ -0.32
CHID1-221ENST00000533056 RBM6P78332 1123 aaKnown RBP13.02□□□□□ -0.33
CHID1-221ENST00000533056 PSME1Q06323 249 aa13.02□□□□□ -0.33
CHID1-221ENST00000533056 DIEXFQ68CQ4 756 aaKnown RBP13.02□□□□□ -0.33
CHID1-221ENST00000533056 TTC21AQ8NDW8 1320 aa13.02□□□□□ -0.33
CHID1-221ENST00000533056 KRT28Q7Z3Y7 464 aa13.01□□□□□ -0.33
CHID1-221ENST00000533056 CGNL1Q0VF96 1302 aa13.01□□□□□ -0.33
CHID1-221ENST00000533056 SBNO1A3KN83 1393 aa13.01□□□□□ -0.33
CHID1-221ENST00000533056 NSD2O96028 1365 aa13.01□□□□□ -0.33
CHID1-221ENST00000533056 USP54Q70EL1 1684 aa13.01□□□□□ -0.33
CHID1-221ENST00000533056 ALS2Q96Q42 1657 aa13.01□□□□□ -0.33
CHID1-221ENST00000533056 ANKRD26Q9UPS8 1709 aa13□□□□□ -0.33
CHID1-221ENST00000533056 COL22A1Q8NFW1 1626 aaPredicted RBP13□□□□□ -0.33
CHID1-221ENST00000533056 FYB1O15117 783 aa13□□□□□ -0.33
CHID1-221ENST00000533056 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13□□□□□ -0.33
CHID1-221ENST00000533056 USP21Q9UK80 565 aa13□□□□□ -0.33
CHID1-221ENST00000533056 OVOS2A0A0J9YW53 1432 aa12.99□□□□□ -0.33
CHID1-221ENST00000533056 OVOS2Q6IE36 1432 aa12.99□□□□□ -0.33
CHID1-221ENST00000533056 USP31Q70CQ4 1352 aa12.99□□□□□ -0.33
CHID1-221ENST00000533056 NME9Q86XW9 330 aa12.99□□□□□ -0.33
CHID1-221ENST00000533056 MARF1Q9Y4F3 1742 aaKnown RBP12.99□□□□□ -0.33
CHID1-221ENST00000533056 TNS3Q68CZ2 1445 aa12.98□□□□□ -0.33
CHID1-221ENST00000533056 PARD3Q8TEW0 1356 aa12.98□□□□□ -0.33
CHID1-221ENST00000533056 FNBP4Q8N3X1 1017 aaPredicted RBP12.98□□□□□ -0.33
CHID1-221ENST00000533056 SPATA31A3Q5VYP0 1347 aa12.97□□□□□ -0.33
CHID1-221ENST00000533056 PAK3O75914 559 aaPredicted RBP12.97□□□□□ -0.33
CHID1-221ENST00000533056 CC2D1BQ5T0F9 858 aaKnown RBP12.97□□□□□ -0.33
CHID1-221ENST00000533056 GGNBP2Q9H3C7 697 aa12.97□□□□□ -0.33
CHID1-221ENST00000533056 ZRANB1Q9UGI0 708 aa12.97□□□□□ -0.33
CHID1-221ENST00000533056 TRPC5Q9UL62 973 aaPredicted RBP12.97□□□□□ -0.33
CHID1-221ENST00000533056 PRKRIP1Q9H875 184 aaPredicted RBP12.96□□□□□ -0.33
CHID1-221ENST00000533056 ATRNO75882 1429 aa12.95□□□□□ -0.34
CHID1-221ENST00000533056 ARHGEF10O15013 1369 aa12.94□□□□□ -0.34
CHID1-221ENST00000533056 SLIT3O75094 1523 aa12.94□□□□□ -0.34
CHID1-221ENST00000533056 CRYBG1Q9Y4K1 1723 aa12.94□□□□□ -0.34
CHID1-221ENST00000533056 BCL9LQ86UU0 1499 aa12.94□□□□□ -0.34
CHID1-221ENST00000533056 ABTB2Q8N961 1025 aa12.94□□□□□ -0.34
CHID1-221ENST00000533056 USP19O94966 1318 aa12.93□□□□□ -0.34
CHID1-221ENST00000533056 ANP32CO43423 234 aa12.93□□□□□ -0.34
CHID1-221ENST00000533056 NLRP6P59044 892 aa12.93□□□□□ -0.34
CHID1-221ENST00000533056 CNGB1Q14028 1251 aaPredicted RBP12.93□□□□□ -0.34
CHID1-221ENST00000533056 RALBP1Q15311 655 aa12.93□□□□□ -0.34
CHID1-221ENST00000533056 COG3Q96JB2 828 aa12.93□□□□□ -0.34
CHID1-221ENST00000533056 PHRF1Q9P1Y6 1649 aaKnown RBP12.92□□□□□ -0.34
CHID1-221ENST00000533056 NUTM2GQ5VZR2 741 aa12.92□□□□□ -0.34
CHID1-221ENST00000533056 MORC1Q86VD1 984 aa12.92□□□□□ -0.34
CHID1-221ENST00000533056 NFAT5O94916 1531 aa12.92□□□□□ -0.34
CHID1-221ENST00000533056 ABCA3Q99758 1704 aa12.91□□□□□ -0.34
CHID1-221ENST00000533056 PLEKHG5O94827 1062 aa12.91□□□□□ -0.34
CHID1-221ENST00000533056 NLRP13Q86W25 1043 aa12.91□□□□□ -0.34
CHID1-221ENST00000533056 LMOD2Q6P5Q4 547 aa12.9□□□□□ -0.34
CHID1-221ENST00000533056 CABLES1Q8TDN4 633 aa12.9□□□□□ -0.34
CHID1-221ENST00000533056 AATKQ6ZMQ8 1374 aa12.9□□□□□ -0.34
CHID1-221ENST00000533056 MYBBP1AQ9BQG0 1328 aaKnown RBP12.89□□□□□ -0.35
CHID1-221ENST00000533056 SMG6Q86US8 1419 aaKnown RBP12.89□□□□□ -0.35
CHID1-221ENST00000533056 PPP2R1AP30153 589 aa12.89□□□□□ -0.35
CHID1-221ENST00000533056 MIER1Q8N108 512 aa12.89□□□□□ -0.35
CHID1-221ENST00000533056 GJD4Q96KN9 370 aaPredicted RBP12.89□□□□□ -0.35
CHID1-221ENST00000533056 SLIT2O94813 1529 aa12.88□□□□□ -0.35
CHID1-221ENST00000533056 UNC5CLQ8IV45 518 aa12.88□□□□□ -0.35
CHID1-221ENST00000533056 GCP02774 474 aa12.87□□□□□ -0.35
CHID1-221ENST00000533056 FBLN1P23142 703 aa12.87□□□□□ -0.35
CHID1-221ENST00000533056 TNNT2P45379 298 aaPredicted RBP12.87□□□□□ -0.35
CHID1-221ENST00000533056 HAP1P54257 671 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms