RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 ERC2O15083 957 aa18.7■□□□□ 0.58
PCDHA3-202ENST00000532566 RARSP54136 660 aaKnown RBP18.7■□□□□ 0.58
PCDHA3-202ENST00000532566 SHANK2Q9UPX8 1470 aa18.69■□□□□ 0.58
PCDHA3-202ENST00000532566 DENND4BO75064 1496 aaPredicted RBP18.69■□□□□ 0.58
PCDHA3-202ENST00000532566 ESCO1Q5FWF5 840 aa18.69■□□□□ 0.58
PCDHA3-202ENST00000532566 ABCC11Q96J66 1382 aa18.68■□□□□ 0.58
PCDHA3-202ENST00000532566 DISP1Q96F81 1524 aa18.68■□□□□ 0.58
PCDHA3-202ENST00000532566 ABCA5Q8WWZ7 1642 aa18.68■□□□□ 0.58
PCDHA3-202ENST00000532566 LRRFIP1Q32MZ4 808 aaKnown RBP18.67■□□□□ 0.58
PCDHA3-202ENST00000532566 CHMP4CQ96CF2 233 aa18.67■□□□□ 0.58
PCDHA3-202ENST00000532566 DNMT1P26358 1616 aaKnown RBP18.67■□□□□ 0.58
PCDHA3-202ENST00000532566 PLEKHO1Q53GL0 409 aaPredicted RBP18.67■□□□□ 0.58
PCDHA3-202ENST00000532566 RIC3Q7Z5B4 369 aa18.67■□□□□ 0.58
PCDHA3-202ENST00000532566 FAM184AQ8NB25 1140 aa18.67■□□□□ 0.58
PCDHA3-202ENST00000532566 GNAI2P04899 355 aa18.66■□□□□ 0.58
PCDHA3-202ENST00000532566 RNF20Q5VTR2 975 aa18.66■□□□□ 0.58
PCDHA3-202ENST00000532566 FBXO31Q5XUX0 539 aaPredicted RBP18.66■□□□□ 0.58
PCDHA3-202ENST00000532566 H3BQV1 296 aa18.66■□□□□ 0.58
PCDHA3-202ENST00000532566 SURF6O75683 361 aaKnown RBP18.66■□□□□ 0.58
PCDHA3-202ENST00000532566 IFFO2Q5TF58 517 aa18.66■□□□□ 0.58
PCDHA3-202ENST00000532566 AIMP1Q12904 312 aaKnown RBP18.66■□□□□ 0.58
PCDHA3-202ENST00000532566 HDGFL1Q5TGJ6 251 aa18.66■□□□□ 0.58
PCDHA3-202ENST00000532566 EIF4G3O43432 1585 aaKnown RBP18.65■□□□□ 0.58
PCDHA3-202ENST00000532566 NSD2O96028 1365 aa18.65■□□□□ 0.58
PCDHA3-202ENST00000532566 GTF2E1P29083 439 aaPredicted RBP18.65■□□□□ 0.58
PCDHA3-202ENST00000532566 SAMD9Q5K651 1589 aa18.65■□□□□ 0.58
PCDHA3-202ENST00000532566 PZPP20742 1482 aa18.65■□□□□ 0.58
PCDHA3-202ENST00000532566 CCT4P50991 539 aaKnown RBP18.65■□□□□ 0.58
PCDHA3-202ENST00000532566 AMER1Q5JTC6 1135 aaPredicted RBP18.65■□□□□ 0.58
PCDHA3-202ENST00000532566 LRPPRCP42704 1394 aaKnown RBP18.65■□□□□ 0.58
PCDHA3-202ENST00000532566 TMEM57Q8N5G2 664 aa18.65■□□□□ 0.58
PCDHA3-202ENST00000532566 TOMM22Q9NS69 142 aa18.65■□□□□ 0.58
PCDHA3-202ENST00000532566 PARD3Q8TEW0 1356 aa18.65■□□□□ 0.58
PCDHA3-202ENST00000532566 ARHGEF12Q9NZN5 1544 aa18.64■□□□□ 0.58
PCDHA3-202ENST00000532566 CLASRPQ8N2M8 674 aaKnown RBP18.64■□□□□ 0.58
PCDHA3-202ENST00000532566 SSH1Q8WYL5 1049 aa18.64■□□□□ 0.57
PCDHA3-202ENST00000532566 SF3A1Q15459 793 aaKnown RBP18.64■□□□□ 0.57
PCDHA3-202ENST00000532566 CHD1LQ86WJ1 897 aa18.64■□□□□ 0.57
PCDHA3-202ENST00000532566 TRAPPC8Q9Y2L5 1435 aa18.64■□□□□ 0.57
PCDHA3-202ENST00000532566 CCDC34Q96HJ3 373 aa18.64■□□□□ 0.57
PCDHA3-202ENST00000532566 POGZQ7Z3K3 1410 aa18.63■□□□□ 0.57
PCDHA3-202ENST00000532566 TESK2Q96S53 571 aa18.63■□□□□ 0.57
PCDHA3-202ENST00000532566 FRAT2O75474 233 aaPredicted RBP18.63■□□□□ 0.57
PCDHA3-202ENST00000532566 TPM4P67936 248 aa18.63■□□□□ 0.57
PCDHA3-202ENST00000532566 THUMPD2Q9BTF0 503 aaKnown RBP18.63■□□□□ 0.57
PCDHA3-202ENST00000532566 ISY1Q9ULR0 285 aaKnown RBP18.62■□□□□ 0.57
PCDHA3-202ENST00000532566 PROSER2Q86WR7 435 aaPredicted RBP18.62■□□□□ 0.57
PCDHA3-202ENST00000532566 RABEP1Q15276 862 aa18.61■□□□□ 0.57
PCDHA3-202ENST00000532566 NME9Q86XW9 330 aa18.61■□□□□ 0.57
PCDHA3-202ENST00000532566 SMC3Q9UQE7 1217 aa18.61■□□□□ 0.57
PCDHA3-202ENST00000532566 ALDH1L2Q3SY69 923 aa18.6■□□□□ 0.57
PCDHA3-202ENST00000532566 CNTROBQ8N137 903 aa18.6■□□□□ 0.57
PCDHA3-202ENST00000532566 ASXL2Q76L83 1435 aa18.6■□□□□ 0.57
PCDHA3-202ENST00000532566 WASLO00401 505 aaPredicted RBP18.59■□□□□ 0.57
PCDHA3-202ENST00000532566 MCTP1Q6DN14 999 aa18.59■□□□□ 0.57
PCDHA3-202ENST00000532566 PBRM1Q86U86 1689 aa18.59■□□□□ 0.57
PCDHA3-202ENST00000532566 SKAP1Q86WV1 359 aa18.59■□□□□ 0.57
PCDHA3-202ENST00000532566 ASXL1Q8IXJ9 1541 aa18.59■□□□□ 0.57
PCDHA3-202ENST00000532566 A2MP01023 1474 aa18.59■□□□□ 0.57
PCDHA3-202ENST00000532566 ZNF530Q6P9A1 599 aaPredicted RBP18.59■□□□□ 0.57
PCDHA3-202ENST00000532566 ADGRL2O95490 1459 aa18.59■□□□□ 0.57
PCDHA3-202ENST00000532566 EMILIN1Q9Y6C2 1016 aa18.59■□□□□ 0.57
PCDHA3-202ENST00000532566 ANKLE2Q86XL3 938 aa18.58■□□□□ 0.57
PCDHA3-202ENST00000532566 IFT57Q9NWB7 429 aa18.58■□□□□ 0.57
PCDHA3-202ENST00000532566 PPP6R1Q9UPN7 881 aa18.58■□□□□ 0.57
PCDHA3-202ENST00000532566 RPAP2Q8IXW5 612 aaPredicted RBP18.58■□□□□ 0.56
PCDHA3-202ENST00000532566 NEK4P51957 841 aa18.58■□□□□ 0.56
PCDHA3-202ENST00000532566 CPLX2Q6PUV4 134 aaKnown RBP18.57■□□□□ 0.56
PCDHA3-202ENST00000532566 SRCIN1Q9C0H9 1055 aa18.57■□□□□ 0.56
PCDHA3-202ENST00000532566 WDR7Q9Y4E6 1490 aa18.57■□□□□ 0.56
PCDHA3-202ENST00000532566 VPS37CA5D8V6 355 aaPredicted RBP18.57■□□□□ 0.56
PCDHA3-202ENST00000532566 TULP1O00294 542 aaPredicted RBP18.57■□□□□ 0.56
PCDHA3-202ENST00000532566 TRAK2O60296 914 aa18.57■□□□□ 0.56
PCDHA3-202ENST00000532566 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.57■□□□□ 0.56
PCDHA3-202ENST00000532566 EIF2AK4Q9P2K8 1649 aaKnown RBP18.56■□□□□ 0.56
PCDHA3-202ENST00000532566 MCM2P49736 904 aa18.56■□□□□ 0.56
PCDHA3-202ENST00000532566 LRRCC1Q9C099 1032 aa18.56■□□□□ 0.56
PCDHA3-202ENST00000532566 MSH5O43196 834 aa18.56■□□□□ 0.56
PCDHA3-202ENST00000532566 ZNF518AQ6AHZ1 1483 aa18.55■□□□□ 0.56
PCDHA3-202ENST00000532566 TEX14Q8IWB6 1497 aa18.55■□□□□ 0.56
PCDHA3-202ENST00000532566 SYTL4Q96C24 671 aaPredicted RBP18.55■□□□□ 0.56
PCDHA3-202ENST00000532566 ANKRD36BQ8N2N9 1353 aa18.55■□□□□ 0.56
PCDHA3-202ENST00000532566 UHRF1BP1Q6BDS2 1440 aa18.54■□□□□ 0.56
PCDHA3-202ENST00000532566 NEUROD6Q96NK8 337 aa18.54■□□□□ 0.56
PCDHA3-202ENST00000532566 DCTN1Q14203 1278 aa18.54■□□□□ 0.56
PCDHA3-202ENST00000532566 TATP17735 454 aaPredicted RBP18.54■□□□□ 0.56
PCDHA3-202ENST00000532566 MCM10Q7L590 875 aa18.53■□□□□ 0.56
PCDHA3-202ENST00000532566 MRE11P49959 708 aa18.53■□□□□ 0.56
PCDHA3-202ENST00000532566 PER1O15534 1290 aaPredicted RBP18.53■□□□□ 0.56
PCDHA3-202ENST00000532566 TRIM27P14373 513 aa18.53■□□□□ 0.56
PCDHA3-202ENST00000532566 ERC1Q8IUD2 1116 aa18.53■□□□□ 0.56
PCDHA3-202ENST00000532566 FSD1Q9BTV5 496 aa18.53■□□□□ 0.56
PCDHA3-202ENST00000532566 MAGI3Q5TCQ9 1506 aa18.53■□□□□ 0.56
PCDHA3-202ENST00000532566 CPLX1O14810 134 aa18.52■□□□□ 0.55
PCDHA3-202ENST00000532566 GOLGA6L19H0YKK7 550 aa18.51■□□□□ 0.55
PCDHA3-202ENST00000532566 SYNE3Q6ZMZ3 975 aa18.51■□□□□ 0.55
PCDHA3-202ENST00000532566 GNAT3A8MTJ3 354 aa18.51■□□□□ 0.55
PCDHA3-202ENST00000532566 APPP05067 770 aa18.51■□□□□ 0.55
PCDHA3-202ENST00000532566 TRDNQ13061 729 aa18.51■□□□□ 0.55
PCDHA3-202ENST00000532566 TMX4Q9H1E5 349 aaPredicted RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms