RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 MRE11P49959 708 aa18.81■□□□□ 0.6
NXF1-213ENST00000532297 PHF23Q9BUL5 403 aaPredicted RBP18.81■□□□□ 0.6
NXF1-213ENST00000532297 CFAP53Q96M91 514 aa18.8■□□□□ 0.6
NXF1-213ENST00000532297 EXOSC9Q06265 439 aaKnown RBP18.79■□□□□ 0.6
NXF1-213ENST00000532297 CHMP5Q9NZZ3 219 aa18.79■□□□□ 0.6
NXF1-213ENST00000532297 ANKRD36BQ8N2N9 1353 aa18.78■□□□□ 0.6
NXF1-213ENST00000532297 MYH16Q9H6N6 1097 aa18.78■□□□□ 0.6
NXF1-213ENST00000532297 GRPEL1Q9HAV7 217 aa18.76■□□□□ 0.59
NXF1-213ENST00000532297 YEATS2Q9ULM3 1422 aa18.76■□□□□ 0.59
NXF1-213ENST00000532297 FBXO31Q5XUX0 539 aaPredicted RBP18.76■□□□□ 0.59
NXF1-213ENST00000532297 WDR63Q8IWG1 891 aa18.76■□□□□ 0.59
NXF1-213ENST00000532297 PRAM1Q96QH2 718 aa18.76■□□□□ 0.59
NXF1-213ENST00000532297 ESPNB1AK53 854 aa18.76■□□□□ 0.59
NXF1-213ENST00000532297 SMC4Q9NTJ3 1288 aa18.76■□□□□ 0.59
NXF1-213ENST00000532297 ZMYM3Q14202 1370 aa18.75■□□□□ 0.59
NXF1-213ENST00000532297 MLH3Q9UHC1 1453 aa18.75■□□□□ 0.59
NXF1-213ENST00000532297 PIK3C2BO00750 1634 aa18.75■□□□□ 0.59
NXF1-213ENST00000532297 USP32Q8NFA0 1604 aa18.75■□□□□ 0.59
NXF1-213ENST00000532297 FTSJ3Q8IY81 847 aaKnown RBP18.75■□□□□ 0.59
NXF1-213ENST00000532297 TRIM35Q9UPQ4 493 aa18.74■□□□□ 0.59
NXF1-213ENST00000532297 C22orf23Q9BZE7 217 aa18.74■□□□□ 0.59
NXF1-213ENST00000532297 VGFO15240 615 aaPredicted RBP18.73■□□□□ 0.59
NXF1-213ENST00000532297 AAMPQ13685 434 aa18.73■□□□□ 0.59
NXF1-213ENST00000532297 SSH1Q8WYL5 1049 aa18.73■□□□□ 0.59
NXF1-213ENST00000532297 RWDD1Q9H446 243 aaPredicted RBP18.73■□□□□ 0.59
NXF1-213ENST00000532297 DIP2CQ9Y2E4 1556 aa18.73■□□□□ 0.59
NXF1-213ENST00000532297 RPGRIP1LQ68CZ1 1315 aa18.72■□□□□ 0.59
NXF1-213ENST00000532297 TRIM27P14373 513 aa18.72■□□□□ 0.59
NXF1-213ENST00000532297 MVPQ14764 893 aaKnown RBP18.72■□□□□ 0.59
NXF1-213ENST00000532297 ITPRIPQ8IWB1 547 aa18.72■□□□□ 0.59
NXF1-213ENST00000532297 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.72■□□□□ 0.59
NXF1-213ENST00000532297 ERBB4Q15303 1308 aa18.72■□□□□ 0.59
NXF1-213ENST00000532297 TMPOP42166 694 aaKnown RBP18.72■□□□□ 0.59
NXF1-213ENST00000532297 MFAP1P55081 439 aaKnown RBP18.72■□□□□ 0.59
NXF1-213ENST00000532297 PLEKHF1Q96S99 279 aa18.72■□□□□ 0.59
NXF1-213ENST00000532297 ADGRB2O60241 1585 aa18.72■□□□□ 0.59
NXF1-213ENST00000532297 FYB1O15117 783 aa18.71■□□□□ 0.59
NXF1-213ENST00000532297 CCDC27Q2M243 656 aa18.71■□□□□ 0.59
NXF1-213ENST00000532297 DDX11L8A8MPP1 907 aa18.71■□□□□ 0.59
NXF1-213ENST00000532297 DZIP1LQ8IYY4 767 aaKnown RBP18.7■□□□□ 0.58
NXF1-213ENST00000532297 TRIM44Q96DX7 344 aaPredicted RBP18.7■□□□□ 0.58
NXF1-213ENST00000532297 THUMPD2Q9BTF0 503 aaKnown RBP18.7■□□□□ 0.58
NXF1-213ENST00000532297 ZKSCAN2Q63HK3 967 aa18.7■□□□□ 0.58
NXF1-213ENST00000532297 NOB1Q9ULX3 412 aaKnown RBP18.69■□□□□ 0.58
NXF1-213ENST00000532297 ABCC11Q96J66 1382 aa18.69■□□□□ 0.58
NXF1-213ENST00000532297 COL3A1P02461 1466 aaPredicted RBP18.69■□□□□ 0.58
NXF1-213ENST00000532297 CD163L1Q9NR16 1453 aa18.68■□□□□ 0.58
NXF1-213ENST00000532297 RIPK4P57078 832 aa18.68■□□□□ 0.58
NXF1-213ENST00000532297 ISY1Q9ULR0 285 aaKnown RBP18.68■□□□□ 0.58
NXF1-213ENST00000532297 PTPRMP28827 1452 aa18.68■□□□□ 0.58
NXF1-213ENST00000532297 HSCBQ8IWL3 235 aa18.68■□□□□ 0.58
NXF1-213ENST00000532297 CABP1Q9NZU7 370 aa18.68■□□□□ 0.58
NXF1-213ENST00000532297 CFAP74Q9C0B2 1584 aa18.67■□□□□ 0.58
NXF1-213ENST00000532297 WAPLQ7Z5K2 1190 aa18.67■□□□□ 0.58
NXF1-213ENST00000532297 TMEM57Q8N5G2 664 aa18.67■□□□□ 0.58
NXF1-213ENST00000532297 HMOX1P09601 288 aa18.66■□□□□ 0.58
NXF1-213ENST00000532297 PUS7Q96PZ0 661 aaKnown RBP18.66■□□□□ 0.58
NXF1-213ENST00000532297 NSD2O96028 1365 aa18.65■□□□□ 0.58
NXF1-213ENST00000532297 ZRANB1Q9UGI0 708 aa18.65■□□□□ 0.58
NXF1-213ENST00000532297 ZNF692Q9BU19 519 aaPredicted RBP18.64■□□□□ 0.58
NXF1-213ENST00000532297 ELL2O00472 640 aaPredicted RBP18.64■□□□□ 0.57
NXF1-213ENST00000532297 CDK19Q9BWU1 502 aa18.64■□□□□ 0.57
NXF1-213ENST00000532297 C1orf115Q9H7X2 142 aa18.64■□□□□ 0.57
NXF1-213ENST00000532297 CYB5RLQ6IPT4 315 aa18.64■□□□□ 0.57
NXF1-213ENST00000532297 NCKAP5LQ9HCH0 1330 aa18.63■□□□□ 0.57
NXF1-213ENST00000532297 YTHDC2Q9H6S0 1430 aaKnown RBP18.63■□□□□ 0.57
NXF1-213ENST00000532297 GAS2L3Q86XJ1 694 aa18.63■□□□□ 0.57
NXF1-213ENST00000532297 PREX1Q8TCU6 1659 aa18.62■□□□□ 0.57
NXF1-213ENST00000532297 NCBP3Q53F19 620 aaKnown RBP18.62■□□□□ 0.57
NXF1-213ENST00000532297 RICTORQ6R327 1708 aa18.62■□□□□ 0.57
NXF1-213ENST00000532297 TMEM131LA2VDJ0 1609 aa18.62■□□□□ 0.57
NXF1-213ENST00000532297 DIAPH1O60610 1272 aaKnown RBP18.62■□□□□ 0.57
NXF1-213ENST00000532297 TPM2P07951 284 aa18.62■□□□□ 0.57
NXF1-213ENST00000532297 LRRC7Q96NW7 1537 aa18.62■□□□□ 0.57
NXF1-213ENST00000532297 PRKAR2BP31323 418 aa18.61■□□□□ 0.57
NXF1-213ENST00000532297 ATF7IPQ6VMQ6 1270 aa18.61■□□□□ 0.57
NXF1-213ENST00000532297 PHACTR3Q96KR7 559 aa18.61■□□□□ 0.57
NXF1-213ENST00000532297 MLECQ14165 292 aa18.6■□□□□ 0.57
NXF1-213ENST00000532297 TNPO1Q92973 898 aaKnown RBP18.6■□□□□ 0.57
NXF1-213ENST00000532297 STAG3Q9UJ98 1225 aa18.6■□□□□ 0.57
NXF1-213ENST00000532297 EMILIN1Q9Y6C2 1016 aa18.6■□□□□ 0.57
NXF1-213ENST00000532297 LNPKQ9C0E8 428 aa18.59■□□□□ 0.57
NXF1-213ENST00000532297 TERF2IPQ9NYB0 399 aa18.59■□□□□ 0.57
NXF1-213ENST00000532297 CT47B1P0C2W7 299 aaPredicted RBP18.59■□□□□ 0.57
NXF1-213ENST00000532297 DDIT3P35638 169 aa18.59■□□□□ 0.57
NXF1-213ENST00000532297 TSPYL6Q8N831 410 aa18.59■□□□□ 0.57
NXF1-213ENST00000532297 GBP4Q96PP9 640 aa18.58■□□□□ 0.56
NXF1-213ENST00000532297 NCOA3Q9Y6Q9 1424 aa18.58■□□□□ 0.56
NXF1-213ENST00000532297 ANKRD26Q9UPS8 1709 aa18.58■□□□□ 0.56
NXF1-213ENST00000532297 PDCL3Q9H2J4 239 aa18.57■□□□□ 0.56
NXF1-213ENST00000532297 KIF20BQ96Q89 1820 aa18.56■□□□□ 0.56
NXF1-213ENST00000532297 ALKQ9UM73 1620 aa18.56■□□□□ 0.56
NXF1-213ENST00000532297 ATAD2Q6PL18 1390 aa18.56■□□□□ 0.56
NXF1-213ENST00000532297 KIAA1211Q6ZU35 1233 aa18.56■□□□□ 0.56
NXF1-213ENST00000532297 HDGFL2Q7Z4V5 671 aaPredicted RBP18.56■□□□□ 0.56
NXF1-213ENST00000532297 SKOR2Q2VWA4 1001 aaPredicted RBP18.55■□□□□ 0.56
NXF1-213ENST00000532297 NME9Q86XW9 330 aa18.55■□□□□ 0.56
NXF1-213ENST00000532297 POLKQ9UBT6 870 aa18.55■□□□□ 0.56
NXF1-213ENST00000532297 HSP90AB1P08238 724 aaKnown RBP18.55■□□□□ 0.56
NXF1-213ENST00000532297 SLC52A1Q9NWF4 448 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms