RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 SKAP1Q86WV1 359 aa22.18■■□□□ 1.14
BRCA2-204ENST00000530893 SENP3Q9H4L4 574 aaPredicted RBP22.18■■□□□ 1.14
BRCA2-204ENST00000530893 IL16Q14005 1332 aa22.17■■□□□ 1.14
BRCA2-204ENST00000530893 KIF13AQ9H1H9 1805 aa22.17■■□□□ 1.14
BRCA2-204ENST00000530893 KNDC1Q76NI1 1749 aa22.17■■□□□ 1.14
BRCA2-204ENST00000530893 U2SURPO15042 1029 aaKnown RBP22.16■■□□□ 1.14
BRCA2-204ENST00000530893 DIAPH1O60610 1272 aaKnown RBP22.16■■□□□ 1.14
BRCA2-204ENST00000530893 TMPOP42166 694 aaKnown RBP22.16■■□□□ 1.14
BRCA2-204ENST00000530893 HDGFP51858 240 aaKnown RBP22.16■■□□□ 1.14
BRCA2-204ENST00000530893 PANK1Q8TE04 598 aa22.16■■□□□ 1.14
BRCA2-204ENST00000530893 FRAT1Q92837 279 aaPredicted RBP22.16■■□□□ 1.14
BRCA2-204ENST00000530893 SIRT1Q96EB6 747 aa22.16■■□□□ 1.14
BRCA2-204ENST00000530893 COG6Q9Y2V7 657 aa22.16■■□□□ 1.14
BRCA2-204ENST00000530893 ZMYM3Q14202 1370 aa22.15■■□□□ 1.14
BRCA2-204ENST00000530893 PMFBP1Q8TBY8 1022 aa22.14■■□□□ 1.14
BRCA2-204ENST00000530893 ESF1Q9H501 851 aaKnown RBP22.14■■□□□ 1.14
BRCA2-204ENST00000530893 FAM135BQ49AJ0 1406 aa22.14■■□□□ 1.13
BRCA2-204ENST00000530893 TECPR2O15040 1411 aa22.13■■□□□ 1.13
BRCA2-204ENST00000530893 C8orf34Q49A92 452 aa22.13■■□□□ 1.13
BRCA2-204ENST00000530893 WAPLQ7Z5K2 1190 aa22.13■■□□□ 1.13
BRCA2-204ENST00000530893 CPSF1Q10570 1443 aaKnown RBP22.12■■□□□ 1.13
BRCA2-204ENST00000530893 IGHDP01880 384 aa22.12■■□□□ 1.13
BRCA2-204ENST00000530893 MLECQ14165 292 aa22.12■■□□□ 1.13
BRCA2-204ENST00000530893 EDC4Q6P2E9 1401 aaKnown RBP22.12■■□□□ 1.13
BRCA2-204ENST00000530893 FCHSD2O94868 740 aa22.11■■□□□ 1.13
BRCA2-204ENST00000530893 TRIM35Q9UPQ4 493 aa22.11■■□□□ 1.13
BRCA2-204ENST00000530893 WASLO00401 505 aaPredicted RBP22.1■■□□□ 1.13
BRCA2-204ENST00000530893 VIRMAQ69YN4 1812 aaKnown RBP22.1■■□□□ 1.13
BRCA2-204ENST00000530893 CPS1P31327 1500 aa22.09■■□□□ 1.13
BRCA2-204ENST00000530893 RGS3P49796 1198 aa22.08■■□□□ 1.13
BRCA2-204ENST00000530893 ZKSCAN2Q63HK3 967 aa22.08■■□□□ 1.13
BRCA2-204ENST00000530893 METP08581 1390 aa22.08■■□□□ 1.13
BRCA2-204ENST00000530893 PPIP5K1Q6PFW1 1433 aa22.07■■□□□ 1.12
BRCA2-204ENST00000530893 TNRQ92752 1358 aa22.06■■□□□ 1.12
BRCA2-204ENST00000530893 RLBP1P12271 317 aa22.06■■□□□ 1.12
BRCA2-204ENST00000530893 RIPK4P57078 832 aa22.06■■□□□ 1.12
BRCA2-204ENST00000530893 POLKQ9UBT6 870 aa22.06■■□□□ 1.12
BRCA2-204ENST00000530893 MAP2P11137 1827 aaKnown RBP22.06■■□□□ 1.12
BRCA2-204ENST00000530893 AATKQ6ZMQ8 1374 aa22.06■■□□□ 1.12
BRCA2-204ENST00000530893 LRRC7Q96NW7 1537 aa22.06■■□□□ 1.12
BRCA2-204ENST00000530893 NEFMP07197 916 aa22.06■■□□□ 1.12
BRCA2-204ENST00000530893 MON2Q7Z3U7 1717 aa22.05■■□□□ 1.12
BRCA2-204ENST00000530893 MVPQ14764 893 aaKnown RBP22.05■■□□□ 1.12
BRCA2-204ENST00000530893 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.04■■□□□ 1.12
BRCA2-204ENST00000530893 BCL2L13Q9BXK5 485 aa22.04■■□□□ 1.12
BRCA2-204ENST00000530893 UBR1Q8IWV7 1749 aa22.04■■□□□ 1.12
BRCA2-204ENST00000530893 EXOSC9Q06265 439 aaKnown RBP22.04■■□□□ 1.12
BRCA2-204ENST00000530893 TSR2Q969E8 191 aaKnown RBP22.04■■□□□ 1.12
BRCA2-204ENST00000530893 CDK12Q9NYV4 1490 aaPredicted RBP22.04■■□□□ 1.12
BRCA2-204ENST00000530893 NBR1Q14596 966 aa22.03■■□□□ 1.12
BRCA2-204ENST00000530893 DZIP1LQ8IYY4 767 aaKnown RBP22.03■■□□□ 1.12
BRCA2-204ENST00000530893 FTSJ3Q8IY81 847 aaKnown RBP22.02■■□□□ 1.12
BRCA2-204ENST00000530893 RSPH6AQ9H0K4 717 aa22.02■■□□□ 1.12
BRCA2-204ENST00000530893 RWDD1Q9H446 243 aaPredicted RBP22.02■■□□□ 1.12
BRCA2-204ENST00000530893 CCDC61Q9Y6R9 512 aa22.02■■□□□ 1.12
BRCA2-204ENST00000530893 TMEM2Q9UHN6 1383 aa22.02■■□□□ 1.12
BRCA2-204ENST00000530893 RTL5Q5HYW3 569 aaPredicted RBP22.02■■□□□ 1.12
BRCA2-204ENST00000530893 SMC4Q9NTJ3 1288 aa22.02■■□□□ 1.12
BRCA2-204ENST00000530893 AKAP12Q02952 1782 aa22.02■■□□□ 1.12
BRCA2-204ENST00000530893 PPM1GO15355 546 aaPredicted RBP22.01■■□□□ 1.11
BRCA2-204ENST00000530893 ZNF428Q96B54 188 aa22.01■■□□□ 1.11
BRCA2-204ENST00000530893 PCDHB15Q9Y5E8 787 aa22.01■■□□□ 1.11
BRCA2-204ENST00000530893 NUDT16Q96DE0 195 aaKnown RBP22.01■■□□□ 1.11
BRCA2-204ENST00000530893 ITSN1Q15811 1721 aa22■■□□□ 1.11
BRCA2-204ENST00000530893 TXNDC2Q86VQ3 553 aa22■■□□□ 1.11
BRCA2-204ENST00000530893 ZNF692Q9BU19 519 aaPredicted RBP22■■□□□ 1.11
BRCA2-204ENST00000530893 USP35Q9P2H5 1018 aa22■■□□□ 1.11
BRCA2-204ENST00000530893 CALD1Q05682 793 aaKnown RBP21.99■■□□□ 1.11
BRCA2-204ENST00000530893 KIF16BQ96L93 1317 aa21.99■■□□□ 1.11
BRCA2-204ENST00000530893 ALDH1L2Q3SY69 923 aa21.99■■□□□ 1.11
BRCA2-204ENST00000530893 TNNQ9UQP3 1299 aa21.99■■□□□ 1.11
BRCA2-204ENST00000530893 C3P01024 1663 aa21.98■■□□□ 1.11
BRCA2-204ENST00000530893 PRKAR2BP31323 418 aa21.98■■□□□ 1.11
BRCA2-204ENST00000530893 SSH1Q8WYL5 1049 aa21.98■■□□□ 1.11
BRCA2-204ENST00000530893 DDX19BQ9UMR2 479 aa21.98■■□□□ 1.11
BRCA2-204ENST00000530893 ATF7IPQ6VMQ6 1270 aa21.97■■□□□ 1.11
BRCA2-204ENST00000530893 IPO8O15397 1037 aaKnown RBP21.97■■□□□ 1.11
BRCA2-204ENST00000530893 TRIM27P14373 513 aa21.96■■□□□ 1.11
BRCA2-204ENST00000530893 COG3Q96JB2 828 aa21.96■■□□□ 1.11
BRCA2-204ENST00000530893 BRPF1P55201 1214 aaPredicted RBP21.96■■□□□ 1.11
BRCA2-204ENST00000530893 NFE2L2Q16236 605 aa21.96■■□□□ 1.11
BRCA2-204ENST00000530893 DAXXQ9UER7 740 aaPredicted RBP21.96■■□□□ 1.11
BRCA2-204ENST00000530893 IL13P35225 146 aa21.95■■□□□ 1.1
BRCA2-204ENST00000530893 ADAMTS13Q76LX8 1427 aa21.94■■□□□ 1.1
BRCA2-204ENST00000530893 NME9Q86XW9 330 aa21.94■■□□□ 1.1
BRCA2-204ENST00000530893 PLEKHG1Q9ULL1 1385 aa21.94■■□□□ 1.1
BRCA2-204ENST00000530893 HDAC1Q13547 482 aaPredicted RBP21.92■■□□□ 1.1
BRCA2-204ENST00000530893 EMILIN1Q9Y6C2 1016 aa21.92■■□□□ 1.1
BRCA2-204ENST00000530893 LMOD3Q0VAK6 560 aa21.91■■□□□ 1.1
BRCA2-204ENST00000530893 NOB1Q9ULX3 412 aaKnown RBP21.91■■□□□ 1.1
BRCA2-204ENST00000530893 PDZRN3Q9UPQ7 1066 aa21.91■■□□□ 1.1
BRCA2-204ENST00000530893 TOPAZ1Q8N9V7 1692 aa21.91■■□□□ 1.1
BRCA2-204ENST00000530893 ROBO2Q9HCK4 1378 aa21.91■■□□□ 1.1
BRCA2-204ENST00000530893 DEKP35659 375 aaKnown RBP21.9■■□□□ 1.1
BRCA2-204ENST00000530893 IFT57Q9NWB7 429 aa21.9■■□□□ 1.1
BRCA2-204ENST00000530893 TRHP20396 242 aaPredicted RBP21.89■■□□□ 1.1
BRCA2-204ENST00000530893 FBLN1P23142 703 aa21.89■■□□□ 1.1
BRCA2-204ENST00000530893 GNAI1P63096 354 aa21.89■■□□□ 1.1
BRCA2-204ENST00000530893 NRKQ7Z2Y5 1582 aa21.89■■□□□ 1.1
BRCA2-204ENST00000530893 ITPRIPQ8IWB1 547 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms