RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 FYB1O15117 783 aa15.24■□□□□ 0.03
SCN3B-206ENST00000530277 TSHZ3Q63HK5 1081 aa15.24■□□□□ 0.03
SCN3B-206ENST00000530277 CHD1LQ86WJ1 897 aa15.24■□□□□ 0.03
SCN3B-206ENST00000530277 USHBP1Q8N6Y0 703 aa15.24■□□□□ 0.03
SCN3B-206ENST00000530277 EXOC6BQ9Y2D4 811 aa15.24■□□□□ 0.03
SCN3B-206ENST00000530277 PSME1Q06323 249 aa15.23■□□□□ 0.03
SCN3B-206ENST00000530277 RNF214Q8ND24 703 aa15.23■□□□□ 0.03
SCN3B-206ENST00000530277 TBC1D2Q9BYX2 928 aa15.23■□□□□ 0.03
SCN3B-206ENST00000530277 IL1RAPL2Q9NP60 686 aa15.23■□□□□ 0.03
SCN3B-206ENST00000530277 RTEL1-TNFRSF6BF6WH68 1400 aa15.22■□□□□ 0.03
SCN3B-206ENST00000530277 C9orf78Q9NZ63 289 aaPredicted RBP15.22■□□□□ 0.03
SCN3B-206ENST00000530277 PLCH2O75038 1416 aa15.22■□□□□ 0.03
SCN3B-206ENST00000530277 TSPYL6Q8N831 410 aa15.21■□□□□ 0.02
SCN3B-206ENST00000530277 NEK4P51957 841 aa15.2■□□□□ 0.02
SCN3B-206ENST00000530277 AEBP1Q8IUX7 1158 aa15.2■□□□□ 0.02
SCN3B-206ENST00000530277 PHACTR3Q96KR7 559 aa15.2■□□□□ 0.02
SCN3B-206ENST00000530277 DDX11L8A8MPP1 907 aa15.2■□□□□ 0.02
SCN3B-206ENST00000530277 NFE2L2Q16236 605 aa15.2■□□□□ 0.02
SCN3B-206ENST00000530277 CCDC61Q9Y6R9 512 aa15.2■□□□□ 0.02
SCN3B-206ENST00000530277 SURF6O75683 361 aaKnown RBP15.19■□□□□ 0.02
SCN3B-206ENST00000530277 KDM5BQ9UGL1 1544 aa15.19■□□□□ 0.02
SCN3B-206ENST00000530277 FOSBP53539 338 aa15.19■□□□□ 0.02
SCN3B-206ENST00000530277 FCHSD2O94868 740 aa15.19■□□□□ 0.02
SCN3B-206ENST00000530277 CDC45O75419 566 aa15.18■□□□□ 0.02
SCN3B-206ENST00000530277 DDX54Q8TDD1 881 aaKnown RBP15.18■□□□□ 0.02
SCN3B-206ENST00000530277 BCL11BQ9C0K0 894 aaPredicted RBP15.18■□□□□ 0.02
SCN3B-206ENST00000530277 RBM42Q9BTD8 480 aaKnown RBP15.18■□□□□ 0.02
SCN3B-206ENST00000530277 TARBP1Q13395 1621 aaKnown RBP15.18■□□□□ 0.02
SCN3B-206ENST00000530277 CAVIN1Q6NZI2 390 aaKnown RBP15.17■□□□□ 0.02
SCN3B-206ENST00000530277 LARP6Q9BRS8 491 aaKnown RBP15.17■□□□□ 0.02
SCN3B-206ENST00000530277 ESCO1Q5FWF5 840 aa15.17■□□□□ 0.02
SCN3B-206ENST00000530277 PBRM1Q86U86 1689 aa15.16■□□□□ 0.02
SCN3B-206ENST00000530277 HSP90AB2PQ58FF8 381 aa15.16■□□□□ 0.02
SCN3B-206ENST00000530277 DRC7Q8IY82 874 aa15.16■□□□□ 0.02
SCN3B-206ENST00000530277 C1orf141Q5JVX7 400 aa15.16■□□□□ 0.02
SCN3B-206ENST00000530277 CEP170Q5SW79 1584 aa15.16■□□□□ 0.02
SCN3B-206ENST00000530277 INTS3Q68E01 1043 aaKnown RBP15.16■□□□□ 0.02
SCN3B-206ENST00000530277 REC8O95072 547 aa15.16■□□□□ 0.02
SCN3B-206ENST00000530277 ZRSR1Q15695 479 aaKnown RBP15.16■□□□□ 0.02
SCN3B-206ENST00000530277 RNF123Q5XPI4 1314 aa15.15■□□□□ 0.02
SCN3B-206ENST00000530277 ANXA1P04083 346 aa15.15■□□□□ 0.02
SCN3B-206ENST00000530277 UBTFL1P0CB47 393 aaPredicted RBP15.15■□□□□ 0.02
SCN3B-206ENST00000530277 MCM4P33991 863 aa15.15■□□□□ 0.02
SCN3B-206ENST00000530277 CCDC27Q2M243 656 aa15.15■□□□□ 0.02
SCN3B-206ENST00000530277 C16orf71Q8IYS4 520 aaPredicted RBP15.15■□□□□ 0.02
SCN3B-206ENST00000530277 MBIPQ9NS73 344 aa15.15■□□□□ 0.02
SCN3B-206ENST00000530277 ITSN2Q9NZM3 1697 aa15.15■□□□□ 0.02
SCN3B-206ENST00000530277 PRPF40AO75400 957 aaKnown RBP15.15■□□□□ 0.02
SCN3B-206ENST00000530277 HSP90B1P14625 803 aaKnown RBP15.15■□□□□ 0.02
SCN3B-206ENST00000530277 UPF3BQ9BZI7 483 aaKnown RBP15.15■□□□□ 0.02
SCN3B-206ENST00000530277 COL17A1Q9UMD9 1497 aaPredicted RBP15.14■□□□□ 0.01
SCN3B-206ENST00000530277 HDGFL1Q5TGJ6 251 aa15.14■□□□□ 0.01
SCN3B-206ENST00000530277 C8orf58Q8NAV2 365 aa15.14■□□□□ 0.01
SCN3B-206ENST00000530277 DIAPH3Q9NSV4 1193 aa15.14■□□□□ 0.01
SCN3B-206ENST00000530277 NLRP2Q9NX02 1062 aa15.14■□□□□ 0.01
SCN3B-206ENST00000530277 ASXL1Q8IXJ9 1541 aa15.14■□□□□ 0.01
SCN3B-206ENST00000530277 PKNOX2Q96KN3 472 aa15.14■□□□□ 0.01
SCN3B-206ENST00000530277 RPGRIP1LQ68CZ1 1315 aa15.14■□□□□ 0.01
SCN3B-206ENST00000530277 NUP160Q12769 1436 aa15.14■□□□□ 0.01
SCN3B-206ENST00000530277 UHRF1BP1Q6BDS2 1440 aa15.14■□□□□ 0.01
SCN3B-206ENST00000530277 SIL1Q9H173 461 aa15.13■□□□□ 0.01
SCN3B-206ENST00000530277 ATAD2Q6PL18 1390 aa15.13■□□□□ 0.01
SCN3B-206ENST00000530277 ASXL2Q76L83 1435 aa15.13■□□□□ 0.01
SCN3B-206ENST00000530277 VPS37CA5D8V6 355 aaPredicted RBP15.13■□□□□ 0.01
SCN3B-206ENST00000530277 GORABQ5T7V8 394 aa15.13■□□□□ 0.01
SCN3B-206ENST00000530277 DTNBO60941 627 aa15.12■□□□□ 0.01
SCN3B-206ENST00000530277 ABCC10Q5T3U5 1492 aa15.12■□□□□ 0.01
SCN3B-206ENST00000530277 MAGI2Q86UL8 1455 aa15.12■□□□□ 0.01
SCN3B-206ENST00000530277 MBD5Q9P267 1494 aa15.12■□□□□ 0.01
SCN3B-206ENST00000530277 FOXO3O43524 673 aa15.11■□□□□ 0.01
SCN3B-206ENST00000530277 NUTM1Q86Y26 1132 aa15.11■□□□□ 0.01
SCN3B-206ENST00000530277 POLKQ9UBT6 870 aa15.11■□□□□ 0.01
SCN3B-206ENST00000530277 WASLO00401 505 aaPredicted RBP15.11■□□□□ 0.01
SCN3B-206ENST00000530277 FBXW7Q969H0 707 aa15.11■□□□□ 0.01
SCN3B-206ENST00000530277 IFIT2P09913 472 aaKnown RBP15.1■□□□□ 0.01
SCN3B-206ENST00000530277 GCC1Q96CN9 775 aa15.1■□□□□ 0.01
SCN3B-206ENST00000530277 KDM4AO75164 1064 aa15.1■□□□□ 0.01
SCN3B-206ENST00000530277 ADGRL2O95490 1459 aa15.1■□□□□ 0.01
SCN3B-206ENST00000530277 DUOX2Q9NRD8 1548 aa15.1■□□□□ 0.01
SCN3B-206ENST00000530277 ZC3H6P61129 1189 aaKnown RBP15.09■□□□□ 0.01
SCN3B-206ENST00000530277 GCC2Q8IWJ2 1684 aa15.09■□□□□ 0.01
SCN3B-206ENST00000530277 TBC1D32Q96NH3 1257 aa15.09■□□□□ 0.01
SCN3B-206ENST00000530277 TULP1O00294 542 aaPredicted RBP15.08■□□□□ 0
SCN3B-206ENST00000530277 NPHP1O15259 732 aa15.08■□□□□ 0
SCN3B-206ENST00000530277 CFAP44Q96MT7 982 aa15.08■□□□□ 0
SCN3B-206ENST00000530277 MEIS3Q99687 375 aa15.08■□□□□ 0
SCN3B-206ENST00000530277 GNAI2P04899 355 aa15.08■□□□□ 0
SCN3B-206ENST00000530277 MYL6BP14649 208 aa15.08■□□□□ 0
SCN3B-206ENST00000530277 SSFA2P28290 1259 aa15.08■□□□□ 0
SCN3B-206ENST00000530277 HSP90AA2PQ14568 343 aaPredicted RBP15.08■□□□□ 0
SCN3B-206ENST00000530277 TAF7LQ5H9L4 462 aa15.08■□□□□ 0
SCN3B-206ENST00000530277 TBC1D9Q6ZT07 1266 aa15.08■□□□□ 0
SCN3B-206ENST00000530277 A0A1W2PP64 1363 aa15.08■□□□□ 0
SCN3B-206ENST00000530277 UGGT1Q9NYU2 1555 aa15.08■□□□□ 0
SCN3B-206ENST00000530277 PANK2Q9BZ23 570 aa15.08■□□□□ 0
SCN3B-206ENST00000530277 K7ELQ4 463 aaPredicted RBP15.07■□□□□ 0
SCN3B-206ENST00000530277 AAMPQ13685 434 aa15.07■□□□□ 0
SCN3B-206ENST00000530277 ARHGEF12Q9NZN5 1544 aa15.07■□□□□ 0
SCN3B-206ENST00000530277 KDM2BQ8NHM5 1336 aa15.07■□□□□ 0
SCN3B-206ENST00000530277 SRGAP3O43295 1099 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms