RNA–Protein interactions for RNA: ENST00000529689.5

CCDC90B-214, Transcript of coiled-coil domain containing 90B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC90B, Length 4,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-214ENST00000529689 F6X3S4 739 aa12.13□□□□□ -0.47
CCDC90B-214ENST00000529689 FAM135AQ9P2D6 1515 aa12.13□□□□□ -0.47
CCDC90B-214ENST00000529689 TEFQ10587 303 aa12.13□□□□□ -0.47
CCDC90B-214ENST00000529689 CCDC27Q2M243 656 aa12.13□□□□□ -0.47
CCDC90B-214ENST00000529689 IL1RAPL2Q9NP60 686 aa12.13□□□□□ -0.47
CCDC90B-214ENST00000529689 EID1Q9Y6B2 187 aa12.13□□□□□ -0.47
CCDC90B-214ENST00000529689 TSHZ3Q63HK5 1081 aa12.13□□□□□ -0.47
CCDC90B-214ENST00000529689 SYAP1Q96A49 352 aaPredicted RBP12.13□□□□□ -0.47
CCDC90B-214ENST00000529689 AIMP1Q12904 312 aaKnown RBP12.12□□□□□ -0.47
CCDC90B-214ENST00000529689 TRAPPC8Q9Y2L5 1435 aa12.12□□□□□ -0.47
CCDC90B-214ENST00000529689 SYCP2Q9BX26 1530 aa12.12□□□□□ -0.47
CCDC90B-214ENST00000529689 VPS37CA5D8V6 355 aaPredicted RBP12.12□□□□□ -0.47
CCDC90B-214ENST00000529689 K7ELQ4 463 aaPredicted RBP12.12□□□□□ -0.47
CCDC90B-214ENST00000529689 SURF6O75683 361 aaKnown RBP12.12□□□□□ -0.47
CCDC90B-214ENST00000529689 C9orf78Q9NZ63 289 aaPredicted RBP12.12□□□□□ -0.47
CCDC90B-214ENST00000529689 GCC1Q96CN9 775 aa12.12□□□□□ -0.47
CCDC90B-214ENST00000529689 ZRANB1Q9UGI0 708 aa12.12□□□□□ -0.47
CCDC90B-214ENST00000529689 FCHSD2O94868 740 aa12.11□□□□□ -0.47
CCDC90B-214ENST00000529689 SSFA2P28290 1259 aa12.11□□□□□ -0.47
CCDC90B-214ENST00000529689 NUCB2P80303 420 aa12.11□□□□□ -0.47
CCDC90B-214ENST00000529689 R3HCC1Q9Y3T6 440 aaKnown RBP12.11□□□□□ -0.47
CCDC90B-214ENST00000529689 HSP90B1P14625 803 aaKnown RBP12.11□□□□□ -0.47
CCDC90B-214ENST00000529689 FOSBP53539 338 aa12.11□□□□□ -0.47
CCDC90B-214ENST00000529689 UPF3BQ9BZI7 483 aaKnown RBP12.11□□□□□ -0.47
CCDC90B-214ENST00000529689 RBM10P98175 930 aaKnown RBP12.11□□□□□ -0.47
CCDC90B-214ENST00000529689 NFE2L2Q16236 605 aa12.11□□□□□ -0.47
CCDC90B-214ENST00000529689 DIAPH3Q9NSV4 1193 aa12.11□□□□□ -0.47
CCDC90B-214ENST00000529689 KDM2BQ8NHM5 1336 aa12.1□□□□□ -0.47
CCDC90B-214ENST00000529689 LARP6Q9BRS8 491 aaKnown RBP12.1□□□□□ -0.47
CCDC90B-214ENST00000529689 A2MP01023 1474 aa12.1□□□□□ -0.47
CCDC90B-214ENST00000529689 FYB1O15117 783 aa12.1□□□□□ -0.47
CCDC90B-214ENST00000529689 TNPO1Q92973 898 aaKnown RBP12.1□□□□□ -0.47
CCDC90B-214ENST00000529689 C14orf93Q9H972 538 aaKnown RBP12.1□□□□□ -0.47
CCDC90B-214ENST00000529689 DDX54Q8TDD1 881 aaKnown RBP12.1□□□□□ -0.47
CCDC90B-214ENST00000529689 KRT24Q2M2I5 525 aa12.09□□□□□ -0.47
CCDC90B-214ENST00000529689 TSPYL6Q8N831 410 aa12.09□□□□□ -0.47
CCDC90B-214ENST00000529689 DENND4BO75064 1496 aaPredicted RBP12.09□□□□□ -0.47
CCDC90B-214ENST00000529689 CHAF1AQ13111 956 aaPredicted RBP12.09□□□□□ -0.47
CCDC90B-214ENST00000529689 C16orf71Q8IYS4 520 aaPredicted RBP12.09□□□□□ -0.47
CCDC90B-214ENST00000529689 ESPNB1AK53 854 aa12.08□□□□□ -0.47
CCDC90B-214ENST00000529689 KIAA0556O60303 1618 aa12.08□□□□□ -0.48
CCDC90B-214ENST00000529689 UBTFL1P0CB47 393 aaPredicted RBP12.08□□□□□ -0.48
CCDC90B-214ENST00000529689 TBC1D9Q6ZT07 1266 aa12.08□□□□□ -0.48
CCDC90B-214ENST00000529689 RBM33Q96EV2 1170 aaKnown RBP12.08□□□□□ -0.48
CCDC90B-214ENST00000529689 DNMT1P26358 1616 aaKnown RBP12.08□□□□□ -0.48
CCDC90B-214ENST00000529689 FBXW7Q969H0 707 aa12.08□□□□□ -0.48
CCDC90B-214ENST00000529689 SLC52A1Q9NWF4 448 aa12.08□□□□□ -0.48
CCDC90B-214ENST00000529689 XRCC6P12956 609 aaKnown RBP eCLIP12.08□□□□□ -0.48
CCDC90B-214ENST00000529689 NUDT16Q96DE0 195 aaKnown RBP12.07□□□□□ -0.48
CCDC90B-214ENST00000529689 PHACTR3Q96KR7 559 aa12.07□□□□□ -0.48
CCDC90B-214ENST00000529689 NCKAP5LQ9HCH0 1330 aa12.07□□□□□ -0.48
CCDC90B-214ENST00000529689 NINLQ9Y2I6 1382 aa12.07□□□□□ -0.48
CCDC90B-214ENST00000529689 CT47B1P0C2W7 299 aaPredicted RBP12.07□□□□□ -0.48
CCDC90B-214ENST00000529689 RABEP1Q15276 862 aa12.07□□□□□ -0.48
CCDC90B-214ENST00000529689 UHRF1BP1Q6BDS2 1440 aa12.07□□□□□ -0.48
CCDC90B-214ENST00000529689 FIBPO43427 364 aa12.07□□□□□ -0.48
CCDC90B-214ENST00000529689 SAMD9Q5K651 1589 aa12.07□□□□□ -0.48
CCDC90B-214ENST00000529689 ASXL1Q8IXJ9 1541 aa12.06□□□□□ -0.48
CCDC90B-214ENST00000529689 IFIT2P09913 472 aaKnown RBP12.06□□□□□ -0.48
CCDC90B-214ENST00000529689 GDPD2Q9HCC8 539 aa12.06□□□□□ -0.48
CCDC90B-214ENST00000529689 MBIPQ9NS73 344 aa12.06□□□□□ -0.48
CCDC90B-214ENST00000529689 RTEL1-TNFRSF6BF6WH68 1400 aa12.05□□□□□ -0.48
CCDC90B-214ENST00000529689 C8orf58Q8NAV2 365 aa12.05□□□□□ -0.48
CCDC90B-214ENST00000529689 ADGRL1O94910 1474 aa12.05□□□□□ -0.48
CCDC90B-214ENST00000529689 COL17A1Q9UMD9 1497 aaPredicted RBP12.05□□□□□ -0.48
CCDC90B-214ENST00000529689 GORABQ5T7V8 394 aa12.05□□□□□ -0.48
CCDC90B-214ENST00000529689 ABTB2Q8N961 1025 aa12.05□□□□□ -0.48
CCDC90B-214ENST00000529689 GPATCH3Q96I76 525 aa12.05□□□□□ -0.48
CCDC90B-214ENST00000529689 SMC3Q9UQE7 1217 aa12.05□□□□□ -0.48
CCDC90B-214ENST00000529689 CCDC61Q9Y6R9 512 aa12.05□□□□□ -0.48
CCDC90B-214ENST00000529689 NUTM1Q86Y26 1132 aa12.05□□□□□ -0.48
CCDC90B-214ENST00000529689 ADAMTS12P58397 1594 aa12.04□□□□□ -0.48
CCDC90B-214ENST00000529689 GNAI2P04899 355 aa12.04□□□□□ -0.48
CCDC90B-214ENST00000529689 ERC2O15083 957 aa12.04□□□□□ -0.48
CCDC90B-214ENST00000529689 HDGFL1Q5TGJ6 251 aa12.04□□□□□ -0.48
CCDC90B-214ENST00000529689 AEBP1Q8IUX7 1158 aa12.04□□□□□ -0.48
CCDC90B-214ENST00000529689 DTNBO60941 627 aa12.03□□□□□ -0.48
CCDC90B-214ENST00000529689 USHBP1Q8N6Y0 703 aa12.03□□□□□ -0.48
CCDC90B-214ENST00000529689 SYCE3A1L190 88 aa12.03□□□□□ -0.48
CCDC90B-214ENST00000529689 PSME1Q06323 249 aa12.03□□□□□ -0.48
CCDC90B-214ENST00000529689 C1orf141Q5JVX7 400 aa12.03□□□□□ -0.48
CCDC90B-214ENST00000529689 ATAD2Q6PL18 1390 aa12.03□□□□□ -0.48
CCDC90B-214ENST00000529689 SIL1Q9H173 461 aa12.02□□□□□ -0.48
CCDC90B-214ENST00000529689 RPGRIP1LQ68CZ1 1315 aa12.02□□□□□ -0.48
CCDC90B-214ENST00000529689 PHF14O94880 888 aa12.02□□□□□ -0.49
CCDC90B-214ENST00000529689 ZKSCAN1P17029 563 aaPredicted RBP12.02□□□□□ -0.49
CCDC90B-214ENST00000529689 XPCQ01831 940 aaPredicted RBP12.02□□□□□ -0.49
CCDC90B-214ENST00000529689 MEIS3Q99687 375 aa12.02□□□□□ -0.49
CCDC90B-214ENST00000529689 RBM27Q9P2N5 1060 aaKnown RBP12.02□□□□□ -0.49
CCDC90B-214ENST00000529689 FANCAO15360 1455 aa12.02□□□□□ -0.49
CCDC90B-214ENST00000529689 MAGI2Q86UL8 1455 aa12.02□□□□□ -0.49
CCDC90B-214ENST00000529689 KIF21AQ7Z4S6 1674 aa12.02□□□□□ -0.49
CCDC90B-214ENST00000529689 CFAP65Q6ZU64 1925 aaKnown RBP12.02□□□□□ -0.49
CCDC90B-214ENST00000529689 PRKCSHP14314 528 aaPredicted RBP12.02□□□□□ -0.49
CCDC90B-214ENST00000529689 GNL2Q13823 731 aaKnown RBP12.02□□□□□ -0.49
CCDC90B-214ENST00000529689 ZNF592Q92610 1267 aa12.02□□□□□ -0.49
CCDC90B-214ENST00000529689 LRRCC1Q9C099 1032 aa12.02□□□□□ -0.49
CCDC90B-214ENST00000529689 H3BQV1 296 aa12.01□□□□□ -0.49
CCDC90B-214ENST00000529689 GNAI3P08754 354 aa12.01□□□□□ -0.49
CCDC90B-214ENST00000529689 IFFO2Q5TF58 517 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms