RNA–Protein interactions for RNA: ENST00000529446.5

C9orf135-207, Transcript of chromosome 9 open reading frame 135, humanhuman

TSL 1 (best)

Gene C9orf135, Length 697 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-207ENST00000529446 LRRC59Q96AG4 307 aaKnown RBP16.15■□□□□ 0.18
C9orf135-207ENST00000529446 TRPM3Q9HCF6 1732 aaPredicted RBP16.15■□□□□ 0.18
C9orf135-207ENST00000529446 TTC21BQ7Z4L5 1316 aa16.15■□□□□ 0.18
C9orf135-207ENST00000529446 ARHGEF10O15013 1369 aa16.14■□□□□ 0.17
C9orf135-207ENST00000529446 TNS3Q68CZ2 1445 aa16.14■□□□□ 0.17
C9orf135-207ENST00000529446 NSD3Q9BZ95 1437 aa16.14■□□□□ 0.17
C9orf135-207ENST00000529446 COL16A1Q07092 1604 aaPredicted RBP16.14■□□□□ 0.17
C9orf135-207ENST00000529446 SPATA31A3Q5VYP0 1347 aa16.14■□□□□ 0.17
C9orf135-207ENST00000529446 DDX17Q92841 729 aaKnown RBP16.13■□□□□ 0.17
C9orf135-207ENST00000529446 CARD14Q9BXL6 1004 aa16.13■□□□□ 0.17
C9orf135-207ENST00000529446 KNSTRNQ9Y448 316 aa16.13■□□□□ 0.17
C9orf135-207ENST00000529446 PAK3O75914 559 aaPredicted RBP16.12■□□□□ 0.17
C9orf135-207ENST00000529446 XPCQ01831 940 aaPredicted RBP16.12■□□□□ 0.17
C9orf135-207ENST00000529446 CGNL1Q0VF96 1302 aa16.12■□□□□ 0.17
C9orf135-207ENST00000529446 NSD2O96028 1365 aa16.12■□□□□ 0.17
C9orf135-207ENST00000529446 PER1O15534 1290 aaPredicted RBP16.11■□□□□ 0.17
C9orf135-207ENST00000529446 ALS2Q96Q42 1657 aa16.11■□□□□ 0.17
C9orf135-207ENST00000529446 DDX10Q13206 875 aaKnown RBP16.1■□□□□ 0.17
C9orf135-207ENST00000529446 USP31Q70CQ4 1352 aa16.1■□□□□ 0.17
C9orf135-207ENST00000529446 NPC1L1Q9UHC9 1359 aa16.1■□□□□ 0.17
C9orf135-207ENST00000529446 HSPA1LP34931 641 aa16.09■□□□□ 0.17
C9orf135-207ENST00000529446 ABTB2Q8N961 1025 aa16.09■□□□□ 0.17
C9orf135-207ENST00000529446 JCADQ9P266 1359 aa16.09■□□□□ 0.17
C9orf135-207ENST00000529446 MED1Q15648 1581 aaPredicted RBP16.09■□□□□ 0.17
C9orf135-207ENST00000529446 USP54Q70EL1 1684 aa16.08■□□□□ 0.17
C9orf135-207ENST00000529446 NLRP13Q86W25 1043 aa16.08■□□□□ 0.16
C9orf135-207ENST00000529446 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.08■□□□□ 0.16
C9orf135-207ENST00000529446 PIK3C2AO00443 1686 aa16.08■□□□□ 0.16
C9orf135-207ENST00000529446 FYB1O15117 783 aa16.07■□□□□ 0.16
C9orf135-207ENST00000529446 COL22A1Q8NFW1 1626 aaPredicted RBP16.07■□□□□ 0.16
C9orf135-207ENST00000529446 SHPRHQ149N8 1683 aa16.06■□□□□ 0.16
C9orf135-207ENST00000529446 OVOS2A0A0J9YW53 1432 aa16.06■□□□□ 0.16
C9orf135-207ENST00000529446 OVOS2Q6IE36 1432 aa16.06■□□□□ 0.16
C9orf135-207ENST00000529446 PNPLA6Q8IY17 1366 aa16.06■□□□□ 0.16
C9orf135-207ENST00000529446 NLRP6P59044 892 aa16.06■□□□□ 0.16
C9orf135-207ENST00000529446 AMER1Q5JTC6 1135 aaPredicted RBP16.06■□□□□ 0.16
C9orf135-207ENST00000529446 LMOD2Q6P5Q4 547 aa16.06■□□□□ 0.16
C9orf135-207ENST00000529446 KIF20BQ96Q89 1820 aa16.05■□□□□ 0.16
C9orf135-207ENST00000529446 NME9Q86XW9 330 aa16.05■□□□□ 0.16
C9orf135-207ENST00000529446 COG3Q96JB2 828 aa16.05■□□□□ 0.16
C9orf135-207ENST00000529446 USP19O94966 1318 aa16.04■□□□□ 0.16
C9orf135-207ENST00000529446 SLIT3O75094 1523 aa16.04■□□□□ 0.16
C9orf135-207ENST00000529446 SPATA31A6Q5VVP1 1343 aa16.03■□□□□ 0.16
C9orf135-207ENST00000529446 KCNH5Q8NCM2 988 aa16.03■□□□□ 0.16
C9orf135-207ENST00000529446 ANKRD26Q9UPS8 1709 aa16.02■□□□□ 0.16
C9orf135-207ENST00000529446 GGNBP2Q9H3C7 697 aa16.02■□□□□ 0.16
C9orf135-207ENST00000529446 PHRF1Q9P1Y6 1649 aaKnown RBP16■□□□□ 0.15
C9orf135-207ENST00000529446 CRYBG1Q9Y4K1 1723 aa15.99■□□□□ 0.15
C9orf135-207ENST00000529446 GCP02774 474 aa15.99■□□□□ 0.15
C9orf135-207ENST00000529446 NUTM2GQ5VZR2 741 aa15.99■□□□□ 0.15
C9orf135-207ENST00000529446 MORC1Q86VD1 984 aa15.99■□□□□ 0.15
C9orf135-207ENST00000529446 MARF1Q9Y4F3 1742 aaKnown RBP15.99■□□□□ 0.15
C9orf135-207ENST00000529446 HAP1P54257 671 aaPredicted RBP15.98■□□□□ 0.15
C9orf135-207ENST00000529446 ABCA3Q99758 1704 aa15.98■□□□□ 0.15
C9orf135-207ENST00000529446 ZRANB1Q9UGI0 708 aa15.98■□□□□ 0.15
C9orf135-207ENST00000529446 AATKQ6ZMQ8 1374 aa15.98■□□□□ 0.15
C9orf135-207ENST00000529446 CC2D1BQ5T0F9 858 aaKnown RBP15.97■□□□□ 0.15
C9orf135-207ENST00000529446 NFAT5O94916 1531 aa15.97■□□□□ 0.15
C9orf135-207ENST00000529446 CPDO75976 1380 aa15.97■□□□□ 0.15
C9orf135-207ENST00000529446 RALBP1Q15311 655 aa15.96■□□□□ 0.15
C9orf135-207ENST00000529446 PARD3Q8TEW0 1356 aa15.96■□□□□ 0.15
C9orf135-207ENST00000529446 ABCC6O95255 1503 aa15.95■□□□□ 0.14
C9orf135-207ENST00000529446 CABLES1Q8TDN4 633 aa15.95■□□□□ 0.14
C9orf135-207ENST00000529446 KIF24Q5T7B8 1368 aa15.95■□□□□ 0.14
C9orf135-207ENST00000529446 RTL1A6NKG5 1358 aa15.92■□□□□ 0.14
C9orf135-207ENST00000529446 ILDR1Q86SU0 546 aaPredicted RBP15.92■□□□□ 0.14
C9orf135-207ENST00000529446 ARHGEF25Q86VW2 580 aa15.92■□□□□ 0.14
C9orf135-207ENST00000529446 SMG6Q86US8 1419 aaKnown RBP15.92■□□□□ 0.14
C9orf135-207ENST00000529446 KIAA0232Q92628 1395 aa15.91■□□□□ 0.14
C9orf135-207ENST00000529446 NUTM2BA6NNL0 878 aaPredicted RBP15.91■□□□□ 0.14
C9orf135-207ENST00000529446 NUTM2EB1AL46 878 aaPredicted RBP15.91■□□□□ 0.14
C9orf135-207ENST00000529446 ANP32CO43423 234 aa15.91■□□□□ 0.14
C9orf135-207ENST00000529446 NUTM2AQ8IVF1 878 aaPredicted RBP15.91■□□□□ 0.14
C9orf135-207ENST00000529446 PRKRIP1Q9H875 184 aaPredicted RBP15.91■□□□□ 0.14
C9orf135-207ENST00000529446 PRDM11Q9NQV5 511 aa15.91■□□□□ 0.14
C9orf135-207ENST00000529446 SOX12O15370 315 aa15.9■□□□□ 0.14
C9orf135-207ENST00000529446 PLEKHG5O94827 1062 aa15.9■□□□□ 0.14
C9orf135-207ENST00000529446 ZC3H6P61129 1189 aaKnown RBP15.9■□□□□ 0.14
C9orf135-207ENST00000529446 DIEXFQ68CQ4 756 aaKnown RBP15.9■□□□□ 0.14
C9orf135-207ENST00000529446 MAP3K19Q56UN5 1328 aa15.9■□□□□ 0.14
C9orf135-207ENST00000529446 LRP6O75581 1613 aa15.9■□□□□ 0.14
C9orf135-207ENST00000529446 TNNT2P45379 298 aaPredicted RBP15.89■□□□□ 0.13
C9orf135-207ENST00000529446 POLKQ9UBT6 870 aa15.89■□□□□ 0.13
C9orf135-207ENST00000529446 COL14A1Q05707 1796 aaKnown RBP15.89■□□□□ 0.13
C9orf135-207ENST00000529446 MYBBP1AQ9BQG0 1328 aaKnown RBP15.89■□□□□ 0.13
C9orf135-207ENST00000529446 FLT4P35916 1363 aa15.88■□□□□ 0.13
C9orf135-207ENST00000529446 BLMP54132 1417 aaPredicted RBP15.88■□□□□ 0.13
C9orf135-207ENST00000529446 ADAMTS2O95450 1211 aa15.88■□□□□ 0.13
C9orf135-207ENST00000529446 CDK12Q9NYV4 1490 aaPredicted RBP15.87■□□□□ 0.13
C9orf135-207ENST00000529446 PPP2R1AP30153 589 aa15.87■□□□□ 0.13
C9orf135-207ENST00000529446 AMPHP49418 695 aa15.87■□□□□ 0.13
C9orf135-207ENST00000529446 CNGB1Q14028 1251 aaPredicted RBP15.87■□□□□ 0.13
C9orf135-207ENST00000529446 RRS1Q15050 365 aaKnown RBP15.87■□□□□ 0.13
C9orf135-207ENST00000529446 MEX3CQ5U5Q3 659 aaKnown RBP15.87■□□□□ 0.13
C9orf135-207ENST00000529446 IP6K1Q92551 441 aa15.87■□□□□ 0.13
C9orf135-207ENST00000529446 LTN1O94822 1766 aa15.87■□□□□ 0.13
C9orf135-207ENST00000529446 INSRP06213 1382 aa15.86■□□□□ 0.13
C9orf135-207ENST00000529446 LMO7Q8WWI1 1683 aa15.86■□□□□ 0.13
C9orf135-207ENST00000529446 FAM83GA6ND36 823 aa15.85■□□□□ 0.13
C9orf135-207ENST00000529446 EMILIN1Q9Y6C2 1016 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms