RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 PNPLA6Q8IY17 1366 aa26.22■■□□□ 1.79
SMIM3-201ENST00000526627 TSPOAP1O95153 1857 aa26.22■■□□□ 1.79
SMIM3-201ENST00000526627 SPATA31D1Q6ZQQ2 1576 aa26.22■■□□□ 1.79
SMIM3-201ENST00000526627 PPP6R1Q9UPN7 881 aa26.22■■□□□ 1.79
SMIM3-201ENST00000526627 KIF20BQ96Q89 1820 aa26.22■■□□□ 1.79
SMIM3-201ENST00000526627 DLC1Q96QB1 1528 aa26.22■■□□□ 1.79
SMIM3-201ENST00000526627 CABP1Q9NZU7 370 aa26.21■■□□□ 1.79
SMIM3-201ENST00000526627 STAG3Q9UJ98 1225 aa26.21■■□□□ 1.79
SMIM3-201ENST00000526627 HDGFL2Q7Z4V5 671 aaPredicted RBP26.2■■□□□ 1.79
SMIM3-201ENST00000526627 TSR2Q969E8 191 aaKnown RBP26.2■■□□□ 1.79
SMIM3-201ENST00000526627 RIMBP3CA6NJZ7 1639 aa26.2■■□□□ 1.78
SMIM3-201ENST00000526627 RIMBP3BA6NNM3 1639 aa26.2■■□□□ 1.78
SMIM3-201ENST00000526627 RIMBP3Q9UFD9 1639 aa26.2■■□□□ 1.78
SMIM3-201ENST00000526627 MAPK8IP3Q9UPT6 1336 aa26.19■■□□□ 1.78
SMIM3-201ENST00000526627 CT47B1P0C2W7 299 aaPredicted RBP26.18■■□□□ 1.78
SMIM3-201ENST00000526627 PMFBP1Q8TBY8 1022 aa26.18■■□□□ 1.78
SMIM3-201ENST00000526627 PPM1GO15355 546 aaPredicted RBP26.17■■□□□ 1.78
SMIM3-201ENST00000526627 SLC4A3P48751 1232 aa26.17■■□□□ 1.78
SMIM3-201ENST00000526627 RIMS2Q9UQ26 1411 aa26.17■■□□□ 1.78
SMIM3-201ENST00000526627 NEFMP07197 916 aa26.16■■□□□ 1.78
SMIM3-201ENST00000526627 WAPLQ7Z5K2 1190 aa26.16■■□□□ 1.78
SMIM3-201ENST00000526627 DIAPH1O60610 1272 aaKnown RBP26.15■■□□□ 1.78
SMIM3-201ENST00000526627 EXOSC9Q06265 439 aaKnown RBP26.15■■□□□ 1.78
SMIM3-201ENST00000526627 CDC42BPGQ6DT37 1551 aa26.15■■□□□ 1.78
SMIM3-201ENST00000526627 USP19O94966 1318 aa26.15■■□□□ 1.78
SMIM3-201ENST00000526627 USP35Q9P2H5 1018 aa26.15■■□□□ 1.78
SMIM3-201ENST00000526627 IL16Q14005 1332 aa26.14■■□□□ 1.78
SMIM3-201ENST00000526627 MVPQ14764 893 aaKnown RBP26.14■■□□□ 1.78
SMIM3-201ENST00000526627 ZKSCAN2Q63HK3 967 aa26.14■■□□□ 1.77
SMIM3-201ENST00000526627 ATP7BP35670 1465 aa26.13■■□□□ 1.77
SMIM3-201ENST00000526627 NRXN3Q9Y4C0 1643 aa26.11■■□□□ 1.77
SMIM3-201ENST00000526627 RIPK4P57078 832 aa26.1■■□□□ 1.77
SMIM3-201ENST00000526627 DZIP1LQ8IYY4 767 aaKnown RBP26.1■■□□□ 1.77
SMIM3-201ENST00000526627 SEC24BO95487 1268 aa26.09■■□□□ 1.77
SMIM3-201ENST00000526627 SSH1Q8WYL5 1049 aa26.09■■□□□ 1.77
SMIM3-201ENST00000526627 PDZRN3Q9UPQ7 1066 aa26.09■■□□□ 1.77
SMIM3-201ENST00000526627 LRRC7Q96NW7 1537 aa26.09■■□□□ 1.77
SMIM3-201ENST00000526627 SMC4Q9NTJ3 1288 aa26.09■■□□□ 1.77
SMIM3-201ENST00000526627 POLKQ9UBT6 870 aa26.09■■□□□ 1.77
SMIM3-201ENST00000526627 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.08■■□□□ 1.77
SMIM3-201ENST00000526627 ZMYM3Q14202 1370 aa26.08■■□□□ 1.76
SMIM3-201ENST00000526627 FBLN1P23142 703 aa26.08■■□□□ 1.76
SMIM3-201ENST00000526627 TRIM27P14373 513 aa26.07■■□□□ 1.76
SMIM3-201ENST00000526627 RWDD1Q9H446 243 aaPredicted RBP26.07■■□□□ 1.76
SMIM3-201ENST00000526627 FCHSD2O94868 740 aa26.06■■□□□ 1.76
SMIM3-201ENST00000526627 MLECQ14165 292 aa26.06■■□□□ 1.76
SMIM3-201ENST00000526627 PNNQ9H307 717 aaKnown RBP26.06■■□□□ 1.76
SMIM3-201ENST00000526627 CPSF1Q10570 1443 aaKnown RBP26.05■■□□□ 1.76
SMIM3-201ENST00000526627 FAM135BQ49AJ0 1406 aa26.05■■□□□ 1.76
SMIM3-201ENST00000526627 RSPH6AQ9H0K4 717 aa26.05■■□□□ 1.76
SMIM3-201ENST00000526627 FTSJ3Q8IY81 847 aaKnown RBP26.05■■□□□ 1.76
SMIM3-201ENST00000526627 METP08581 1390 aa26.04■■□□□ 1.76
SMIM3-201ENST00000526627 DAXXQ9UER7 740 aaPredicted RBP26.04■■□□□ 1.76
SMIM3-201ENST00000526627 MAP2P11137 1827 aaKnown RBP26.04■■□□□ 1.76
SMIM3-201ENST00000526627 ATF7IPQ6VMQ6 1270 aa26.02■■□□□ 1.76
SMIM3-201ENST00000526627 WASLO00401 505 aaPredicted RBP26.02■■□□□ 1.76
SMIM3-201ENST00000526627 PRKAR2BP31323 418 aa26.01■■□□□ 1.75
SMIM3-201ENST00000526627 NOB1Q9ULX3 412 aaKnown RBP26.01■■□□□ 1.75
SMIM3-201ENST00000526627 EDC4Q6P2E9 1401 aaKnown RBP26.01■■□□□ 1.75
SMIM3-201ENST00000526627 PPIP5K1Q6PFW1 1433 aa26■■□□□ 1.75
SMIM3-201ENST00000526627 NFKBIBQ15653 356 aa25.99■■□□□ 1.75
SMIM3-201ENST00000526627 KNDC1Q76NI1 1749 aa25.97■■□□□ 1.75
SMIM3-201ENST00000526627 DDX19BQ9UMR2 479 aa25.97■■□□□ 1.75
SMIM3-201ENST00000526627 HDAC1Q13547 482 aaPredicted RBP25.97■■□□□ 1.75
SMIM3-201ENST00000526627 NME9Q86XW9 330 aa25.97■■□□□ 1.75
SMIM3-201ENST00000526627 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.97■■□□□ 1.75
SMIM3-201ENST00000526627 PHACTR3Q96KR7 559 aa25.97■■□□□ 1.75
SMIM3-201ENST00000526627 TXNDC2Q86VQ3 553 aa25.96■■□□□ 1.75
SMIM3-201ENST00000526627 EMILIN1Q9Y6C2 1016 aa25.96■■□□□ 1.75
SMIM3-201ENST00000526627 ITPRIPQ8IWB1 547 aa25.96■■□□□ 1.75
SMIM3-201ENST00000526627 TMEM57Q8N5G2 664 aa25.96■■□□□ 1.75
SMIM3-201ENST00000526627 ZRANB1Q9UGI0 708 aa25.96■■□□□ 1.75
SMIM3-201ENST00000526627 TECPR2O15040 1411 aa25.95■■□□□ 1.74
SMIM3-201ENST00000526627 IL13P35225 146 aa25.95■■□□□ 1.74
SMIM3-201ENST00000526627 ALDH1L2Q3SY69 923 aa25.94■■□□□ 1.74
SMIM3-201ENST00000526627 CDK12Q9NYV4 1490 aaPredicted RBP25.94■■□□□ 1.74
SMIM3-201ENST00000526627 CPS1P31327 1500 aa25.94■■□□□ 1.74
SMIM3-201ENST00000526627 MON2Q7Z3U7 1717 aa25.94■■□□□ 1.74
SMIM3-201ENST00000526627 NFE2L2Q16236 605 aa25.94■■□□□ 1.74
SMIM3-201ENST00000526627 AATKQ6ZMQ8 1374 aa25.93■■□□□ 1.74
SMIM3-201ENST00000526627 HMOX1P09601 288 aa25.93■■□□□ 1.74
SMIM3-201ENST00000526627 NUDT16Q96DE0 195 aaKnown RBP25.93■■□□□ 1.74
SMIM3-201ENST00000526627 KIF16BQ96L93 1317 aa25.93■■□□□ 1.74
SMIM3-201ENST00000526627 SIRT1Q96EB6 747 aa25.93■■□□□ 1.74
SMIM3-201ENST00000526627 NCKAP5LQ9HCH0 1330 aa25.93■■□□□ 1.74
SMIM3-201ENST00000526627 ZBTB40Q9NUA8 1239 aa25.92■■□□□ 1.74
SMIM3-201ENST00000526627 BRPF1P55201 1214 aaPredicted RBP25.91■■□□□ 1.74
SMIM3-201ENST00000526627 AKAP12Q02952 1782 aa25.9■■□□□ 1.74
SMIM3-201ENST00000526627 KIF13AQ9H1H9 1805 aa25.9■■□□□ 1.74
SMIM3-201ENST00000526627 IPO8O15397 1037 aaKnown RBP25.89■■□□□ 1.74
SMIM3-201ENST00000526627 THUMPD2Q9BTF0 503 aaKnown RBP25.89■■□□□ 1.74
SMIM3-201ENST00000526627 SMC5Q8IY18 1101 aa25.89■■□□□ 1.74
SMIM3-201ENST00000526627 TBC1D32Q96NH3 1257 aa25.89■■□□□ 1.74
SMIM3-201ENST00000526627 CCDC61Q9Y6R9 512 aa25.89■■□□□ 1.74
SMIM3-201ENST00000526627 C3P01024 1663 aa25.88■■□□□ 1.73
SMIM3-201ENST00000526627 ZNF428Q96B54 188 aa25.87■■□□□ 1.73
SMIM3-201ENST00000526627 PRR36Q9H6K5 1346 aa25.86■■□□□ 1.73
SMIM3-201ENST00000526627 TNRQ92752 1358 aa25.86■■□□□ 1.73
SMIM3-201ENST00000526627 VAMP4O75379 141 aa25.86■■□□□ 1.73
SMIM3-201ENST00000526627 ZNF853P0CG23 659 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms