RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 CCDC7Q96M83 1385 aa9.09□□□□□ -0.95
CD44-214ENST00000525211 IQSEC2Q5JU85 1478 aa9.08□□□□□ -0.96
CD44-214ENST00000525211 TOPAZ1Q8N9V7 1692 aa9.08□□□□□ -0.96
CD44-214ENST00000525211 TMF1P82094 1093 aa9.08□□□□□ -0.96
CD44-214ENST00000525211 MYOM1P52179 1685 aa9.07□□□□□ -0.96
CD44-214ENST00000525211 ANKARQ7Z5J8 1434 aa9.07□□□□□ -0.96
CD44-214ENST00000525211 FOXO3O43524 673 aa9.07□□□□□ -0.96
CD44-214ENST00000525211 CARD14Q9BXL6 1004 aa9.07□□□□□ -0.96
CD44-214ENST00000525211 PHF8Q9UPP1 1060 aa9.07□□□□□ -0.96
CD44-214ENST00000525211 ROBO1Q9Y6N7 1651 aa9.07□□□□□ -0.96
CD44-214ENST00000525211 ACEP12821 1306 aa9.06□□□□□ -0.96
CD44-214ENST00000525211 PPIP5K1Q6PFW1 1433 aa9.06□□□□□ -0.96
CD44-214ENST00000525211 PLEKHG3A1L390 1219 aa9.06□□□□□ -0.96
CD44-214ENST00000525211 SLC24A1O60721 1099 aa9.06□□□□□ -0.96
CD44-214ENST00000525211 TOM1O60784 492 aa9.06□□□□□ -0.96
CD44-214ENST00000525211 ZRANB1Q9UGI0 708 aa9.06□□□□□ -0.96
CD44-214ENST00000525211 CCDC61Q9Y6R9 512 aa9.06□□□□□ -0.96
CD44-214ENST00000525211 TMC1Q8TDI8 760 aa9.05□□□□□ -0.96
CD44-214ENST00000525211 PXDNQ92626 1479 aa9.04□□□□□ -0.96
CD44-214ENST00000525211 A0A1W2PP64 1363 aa9.04□□□□□ -0.96
CD44-214ENST00000525211 POLR3AO14802 1390 aaPredicted RBP9.04□□□□□ -0.96
CD44-214ENST00000525211 HSPA1LP34931 641 aa9.04□□□□□ -0.96
CD44-214ENST00000525211 KLHL34Q8N239 644 aa9.04□□□□□ -0.96
CD44-214ENST00000525211 CPSF1Q10570 1443 aaKnown RBP9.04□□□□□ -0.96
CD44-214ENST00000525211 SSH2Q76I76 1423 aa9.04□□□□□ -0.96
CD44-214ENST00000525211 ATAD2Q6PL18 1390 aa9.03□□□□□ -0.96
CD44-214ENST00000525211 ZNF316A6NFI3 1004 aaPredicted RBP9.03□□□□□ -0.96
CD44-214ENST00000525211 KRT28Q7Z3Y7 464 aa9.03□□□□□ -0.96
CD44-214ENST00000525211 PLCD3Q8N3E9 789 aa9.03□□□□□ -0.96
CD44-214ENST00000525211 PUS7Q96PZ0 661 aaKnown RBP9.03□□□□□ -0.96
CD44-214ENST00000525211 PANK3Q9H999 370 aa9.03□□□□□ -0.96
CD44-214ENST00000525211 PLEKHG5O94827 1062 aa9.02□□□□□ -0.97
CD44-214ENST00000525211 DDX10Q13206 875 aaKnown RBP9.02□□□□□ -0.97
CD44-214ENST00000525211 NUTM2GQ5VZR2 741 aa9.02□□□□□ -0.97
CD44-214ENST00000525211 MIER1Q8N108 512 aa9.02□□□□□ -0.97
CD44-214ENST00000525211 NGDNQ8NEJ9 315 aaKnown RBP9.02□□□□□ -0.97
CD44-214ENST00000525211 SOS2Q07890 1332 aaPredicted RBP9.02□□□□□ -0.97
CD44-214ENST00000525211 NHSL1Q5SYE7 1610 aa9.02□□□□□ -0.97
CD44-214ENST00000525211 FBLN1P23142 703 aa9.01□□□□□ -0.97
CD44-214ENST00000525211 USP6P35125 1406 aa9.01□□□□□ -0.97
CD44-214ENST00000525211 NME9Q86XW9 330 aa9.01□□□□□ -0.97
CD44-214ENST00000525211 SPOCK2Q92563 424 aa9.01□□□□□ -0.97
CD44-214ENST00000525211 TRPM3Q9HCF6 1732 aaPredicted RBP9.01□□□□□ -0.97
CD44-214ENST00000525211 COL16A1Q07092 1604 aaPredicted RBP9.01□□□□□ -0.97
CD44-214ENST00000525211 AHDC1Q5TGY3 1603 aaPredicted RBP9.01□□□□□ -0.97
CD44-214ENST00000525211 ANKRD36BQ8N2N9 1353 aa9□□□□□ -0.97
CD44-214ENST00000525211 AKAP12Q02952 1782 aa9□□□□□ -0.97
CD44-214ENST00000525211 PER1O15534 1290 aaPredicted RBP9□□□□□ -0.97
CD44-214ENST00000525211 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9□□□□□ -0.97
CD44-214ENST00000525211 CABLES1Q8TDN4 633 aa9□□□□□ -0.97
CD44-214ENST00000525211 TTC21BQ7Z4L5 1316 aa9□□□□□ -0.97
CD44-214ENST00000525211 KTN1Q86UP2 1357 aaKnown RBP8.99□□□□□ -0.97
CD44-214ENST00000525211 NRKQ7Z2Y5 1582 aa8.99□□□□□ -0.97
CD44-214ENST00000525211 NSD3Q9BZ95 1437 aa8.99□□□□□ -0.97
CD44-214ENST00000525211 PSME1Q06323 249 aa8.99□□□□□ -0.97
CD44-214ENST00000525211 CNGB1Q14028 1251 aaPredicted RBP8.99□□□□□ -0.97
CD44-214ENST00000525211 KIF1AQ12756 1690 aa8.99□□□□□ -0.97
CD44-214ENST00000525211 PHLPP1O60346 1717 aa8.99□□□□□ -0.97
CD44-214ENST00000525211 ITSN1Q15811 1721 aa8.99□□□□□ -0.97
CD44-214ENST00000525211 SPATA31A3Q5VYP0 1347 aa8.99□□□□□ -0.97
CD44-214ENST00000525211 NPHP3Q7Z494 1330 aa8.99□□□□□ -0.97
CD44-214ENST00000525211 MON2Q7Z3U7 1717 aa8.98□□□□□ -0.97
CD44-214ENST00000525211 PAK3O75914 559 aaPredicted RBP8.98□□□□□ -0.97
CD44-214ENST00000525211 CDCA8Q53HL2 280 aa8.98□□□□□ -0.97
CD44-214ENST00000525211 PIK3C2AO00443 1686 aa8.97□□□□□ -0.97
CD44-214ENST00000525211 MARF1Q9Y4F3 1742 aaKnown RBP8.97□□□□□ -0.97
CD44-214ENST00000525211 FYB1O15117 783 aa8.97□□□□□ -0.97
CD44-214ENST00000525211 RBM42Q9BTD8 480 aaKnown RBP8.97□□□□□ -0.97
CD44-214ENST00000525211 GGNBP2Q9H3C7 697 aa8.97□□□□□ -0.97
CD44-214ENST00000525211 MED1Q15648 1581 aaPredicted RBP8.97□□□□□ -0.97
CD44-214ENST00000525211 ALS2Q96Q42 1657 aa8.97□□□□□ -0.97
CD44-214ENST00000525211 SBNO1A3KN83 1393 aa8.97□□□□□ -0.97
CD44-214ENST00000525211 PNPLA6Q8IY17 1366 aa8.97□□□□□ -0.97
CD44-214ENST00000525211 LMOD2Q6P5Q4 547 aa8.96□□□□□ -0.98
CD44-214ENST00000525211 HDGFL2Q7Z4V5 671 aaPredicted RBP8.96□□□□□ -0.98
CD44-214ENST00000525211 TERF2IPQ9NYB0 399 aa8.96□□□□□ -0.98
CD44-214ENST00000525211 NINLQ9Y2I6 1382 aa8.96□□□□□ -0.98
CD44-214ENST00000525211 TNS3Q68CZ2 1445 aa8.96□□□□□ -0.98
CD44-214ENST00000525211 EDC4Q6P2E9 1401 aaKnown RBP8.96□□□□□ -0.98
CD44-214ENST00000525211 AKT1S1Q96B36 256 aa8.95□□□□□ -0.98
CD44-214ENST00000525211 LRP6O75581 1613 aa8.94□□□□□ -0.98
CD44-214ENST00000525211 SOX12O15370 315 aa8.94□□□□□ -0.98
CD44-214ENST00000525211 CC2D1BQ5T0F9 858 aaKnown RBP8.94□□□□□ -0.98
CD44-214ENST00000525211 ABTB2Q8N961 1025 aa8.94□□□□□ -0.98
CD44-214ENST00000525211 OVOS2A0A0J9YW53 1432 aa8.94□□□□□ -0.98
CD44-214ENST00000525211 OVOS2Q6IE36 1432 aa8.94□□□□□ -0.98
CD44-214ENST00000525211 CRYBG1Q9Y4K1 1723 aa8.94□□□□□ -0.98
CD44-214ENST00000525211 NUTM2BA6NNL0 878 aaPredicted RBP8.93□□□□□ -0.98
CD44-214ENST00000525211 NUTM2EB1AL46 878 aaPredicted RBP8.93□□□□□ -0.98
CD44-214ENST00000525211 NLRP6P59044 892 aa8.93□□□□□ -0.98
CD44-214ENST00000525211 NUTM2AQ8IVF1 878 aaPredicted RBP8.93□□□□□ -0.98
CD44-214ENST00000525211 LRRC59Q96AG4 307 aaKnown RBP8.93□□□□□ -0.98
CD44-214ENST00000525211 USP19O94966 1318 aa8.93□□□□□ -0.98
CD44-214ENST00000525211 USP31Q70CQ4 1352 aa8.93□□□□□ -0.98
CD44-214ENST00000525211 TTC21AQ8NDW8 1320 aa8.92□□□□□ -0.98
CD44-214ENST00000525211 TNNT2P45379 298 aaPredicted RBP8.92□□□□□ -0.98
CD44-214ENST00000525211 ABCA3Q99758 1704 aa8.91□□□□□ -0.98
CD44-214ENST00000525211 JCADQ9P266 1359 aa8.91□□□□□ -0.98
CD44-214ENST00000525211 GCP02774 474 aa8.91□□□□□ -0.98
CD44-214ENST00000525211 ZC3H6P61129 1189 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms