RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 CHD2O14647 1828 aaKnown RBP22.25■■□□□ 1.15
SREK1-212ENST00000522912 MAP2P11137 1827 aaKnown RBP22.25■■□□□ 1.15
SREK1-212ENST00000522912 PLEKHG3A1L390 1219 aa22.24■■□□□ 1.15
SREK1-212ENST00000522912 ZRANB1Q9UGI0 708 aa22.24■■□□□ 1.15
SREK1-212ENST00000522912 NKTRP30414 1462 aaKnown RBP22.24■■□□□ 1.15
SREK1-212ENST00000522912 RGPD8O14715 1765 aaPredicted RBP22.23■■□□□ 1.15
SREK1-212ENST00000522912 IQSEC2Q5JU85 1478 aa22.23■■□□□ 1.15
SREK1-212ENST00000522912 DUSP27Q5VZP5 1158 aa22.23■■□□□ 1.15
SREK1-212ENST00000522912 NGEFQ8N5V2 710 aa22.23■■□□□ 1.15
SREK1-212ENST00000522912 PPP4R2Q9NY27 417 aa22.23■■□□□ 1.15
SREK1-212ENST00000522912 PNPLA6Q8IY17 1366 aa22.23■■□□□ 1.15
SREK1-212ENST00000522912 FBLN1P23142 703 aa22.23■■□□□ 1.15
SREK1-212ENST00000522912 ACEP12821 1306 aa22.22■■□□□ 1.15
SREK1-212ENST00000522912 NRKQ7Z2Y5 1582 aa22.22■■□□□ 1.15
SREK1-212ENST00000522912 SLFN5Q08AF3 891 aa22.22■■□□□ 1.15
SREK1-212ENST00000522912 U2AF1L5P0DN76 240 aaPredicted RBP22.21■■□□□ 1.15
SREK1-212ENST00000522912 U2AF1Q01081 240 aaKnown RBP eCLIP22.21■■□□□ 1.154e-10■■■□□ 18
SREK1-212ENST00000522912 RRP1P56182 461 aaKnown RBP22.21■■□□□ 1.15
SREK1-212ENST00000522912 POLKQ9UBT6 870 aa22.21■■□□□ 1.15
SREK1-212ENST00000522912 TRMT2AQ8IZ69 625 aaKnown RBP22.2■■□□□ 1.14
SREK1-212ENST00000522912 PELP1Q8IZL8 1130 aaKnown RBP22.2■■□□□ 1.14
SREK1-212ENST00000522912 TCP11L2Q8N4U5 519 aa22.19■■□□□ 1.14
SREK1-212ENST00000522912 SPINK5Q9NQ38 1064 aaPredicted RBP22.19■■□□□ 1.14
SREK1-212ENST00000522912 DMRT2Q9Y5R5 561 aa22.19■■□□□ 1.14
SREK1-212ENST00000522912 TTC21BQ7Z4L5 1316 aa22.17■■□□□ 1.14
SREK1-212ENST00000522912 U2SURPO15042 1029 aaKnown RBP22.17■■□□□ 1.14
SREK1-212ENST00000522912 WWC1Q8IX03 1113 aa22.17■■□□□ 1.14
SREK1-212ENST00000522912 COG3Q96JB2 828 aa22.17■■□□□ 1.14
SREK1-212ENST00000522912 RRP7AQ9Y3A4 280 aaKnown RBP22.17■■□□□ 1.14
SREK1-212ENST00000522912 USP6P35125 1406 aa22.17■■□□□ 1.14
SREK1-212ENST00000522912 DIAPH1O60610 1272 aaKnown RBP22.16■■□□□ 1.14
SREK1-212ENST00000522912 FMN2Q9NZ56 1722 aa22.15■■□□□ 1.14
SREK1-212ENST00000522912 NPHP4O75161 1426 aaPredicted RBP22.15■■□□□ 1.14
SREK1-212ENST00000522912 AATKQ6ZMQ8 1374 aa22.15■■□□□ 1.14
SREK1-212ENST00000522912 NEUROD2Q15784 382 aa22.15■■□□□ 1.14
SREK1-212ENST00000522912 PHF23Q9BUL5 403 aaPredicted RBP22.15■■□□□ 1.14
SREK1-212ENST00000522912 NALCNQ8IZF0 1738 aa22.14■■□□□ 1.13
SREK1-212ENST00000522912 PPM1GO15355 546 aaPredicted RBP22.14■■□□□ 1.13
SREK1-212ENST00000522912 PMFBP1Q8TBY8 1022 aa22.14■■□□□ 1.13
SREK1-212ENST00000522912 PLEKHF1Q96S99 279 aa22.14■■□□□ 1.13
SREK1-212ENST00000522912 EMILIN1Q9Y6C2 1016 aa22.14■■□□□ 1.13
SREK1-212ENST00000522912 SSH2Q76I76 1423 aa22.13■■□□□ 1.13
SREK1-212ENST00000522912 E9PSI1 815 aa22.13■■□□□ 1.13
SREK1-212ENST00000522912 ANKARQ7Z5J8 1434 aa22.12■■□□□ 1.13
SREK1-212ENST00000522912 B4GALNT3Q6L9W6 998 aa22.11■■□□□ 1.13
SREK1-212ENST00000522912 CDK12Q9NYV4 1490 aaPredicted RBP22.1■■□□□ 1.13
SREK1-212ENST00000522912 OVOS2A0A0J9YW53 1432 aa22.1■■□□□ 1.13
SREK1-212ENST00000522912 OVOS2Q6IE36 1432 aa22.1■■□□□ 1.13
SREK1-212ENST00000522912 CCDC27Q2M243 656 aa22.1■■□□□ 1.13
SREK1-212ENST00000522912 NCBP3Q53F19 620 aaKnown RBP22.1■■□□□ 1.13
SREK1-212ENST00000522912 RRS1Q15050 365 aaKnown RBP22.09■■□□□ 1.13
SREK1-212ENST00000522912 PLIN1O60240 522 aa22.08■■□□□ 1.13
SREK1-212ENST00000522912 NGDNQ8NEJ9 315 aaKnown RBP22.08■■□□□ 1.13
SREK1-212ENST00000522912 RBM33Q96EV2 1170 aaKnown RBP22.07■■□□□ 1.12
SREK1-212ENST00000522912 WDR63Q8IWG1 891 aa22.07■■□□□ 1.12
SREK1-212ENST00000522912 IL13P35225 146 aa22.06■■□□□ 1.12
SREK1-212ENST00000522912 TTC21AQ8NDW8 1320 aa22.05■■□□□ 1.12
SREK1-212ENST00000522912 LRRC7Q96NW7 1537 aa22.05■■□□□ 1.12
SREK1-212ENST00000522912 TMPOP42166 694 aaKnown RBP22.05■■□□□ 1.12
SREK1-212ENST00000522912 EXOC6Q8TAG9 804 aa22.05■■□□□ 1.12
SREK1-212ENST00000522912 FCHSD2O94868 740 aa22.04■■□□□ 1.12
SREK1-212ENST00000522912 RSPH6AQ9H0K4 717 aa22.04■■□□□ 1.12
SREK1-212ENST00000522912 MAPK8IP3Q9UPT6 1336 aa22.04■■□□□ 1.12
SREK1-212ENST00000522912 USP31Q70CQ4 1352 aa22.03■■□□□ 1.12
SREK1-212ENST00000522912 ADGRL3Q9HAR2 1447 aa22.03■■□□□ 1.12
SREK1-212ENST00000522912 PNNQ9H307 717 aaKnown RBP22.02■■□□□ 1.12
SREK1-212ENST00000522912 NWD1Q149M9 1564 aa22.02■■□□□ 1.12
SREK1-212ENST00000522912 PIK3C2AO00443 1686 aa22.02■■□□□ 1.12
SREK1-212ENST00000522912 TRIM35Q9UPQ4 493 aa22.01■■□□□ 1.11
SREK1-212ENST00000522912 PEAK1Q9H792 1746 aa22.01■■□□□ 1.11
SREK1-212ENST00000522912 PRKAR2BP31323 418 aa22■■□□□ 1.11
SREK1-212ENST00000522912 TSHZ2Q9NRE2 1034 aa22■■□□□ 1.11
SREK1-212ENST00000522912 HMOX1P09601 288 aa21.99■■□□□ 1.11
SREK1-212ENST00000522912 CCDC136Q96JN2 1154 aa21.99■■□□□ 1.11
SREK1-212ENST00000522912 C20orf194Q5TEA3 1177 aa21.98■■□□□ 1.11
SREK1-212ENST00000522912 MARF1Q9Y4F3 1742 aaKnown RBP21.97■■□□□ 1.11
SREK1-212ENST00000522912 RIPK4P57078 832 aa21.97■■□□□ 1.11
SREK1-212ENST00000522912 PHF8Q9UPP1 1060 aa21.97■■□□□ 1.11
SREK1-212ENST00000522912 CRBNQ96SW2 442 aa21.96■■□□□ 1.11
SREK1-212ENST00000522912 BCAR3O75815 825 aa21.96■■□□□ 1.11
SREK1-212ENST00000522912 PHACTR3Q96KR7 559 aa21.96■■□□□ 1.11
SREK1-212ENST00000522912 SOX12O15370 315 aa21.95■■□□□ 1.1
SREK1-212ENST00000522912 USP54Q70EL1 1684 aa21.95■■□□□ 1.1
SREK1-212ENST00000522912 EIF4A2Q14240 407 aaKnown RBP21.94■■□□□ 1.1
SREK1-212ENST00000522912 MYH16Q9H6N6 1097 aa21.94■■□□□ 1.1
SREK1-212ENST00000522912 C14orf37Q86TY3 774 aa21.93■■□□□ 1.1
SREK1-212ENST00000522912 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.93■■□□□ 1.1
SREK1-212ENST00000522912 HSP90AB2PQ58FF8 381 aa21.92■■□□□ 1.1
SREK1-212ENST00000522912 MAP3K19Q56UN5 1328 aa21.92■■□□□ 1.1
SREK1-212ENST00000522912 NLRP6P59044 892 aa21.92■■□□□ 1.1
SREK1-212ENST00000522912 PROSER2Q86WR7 435 aaPredicted RBP21.92■■□□□ 1.1
SREK1-212ENST00000522912 NEFMP07197 916 aa21.91■■□□□ 1.1
SREK1-212ENST00000522912 RGPD1P0DJD0 1748 aa21.91■■□□□ 1.1
SREK1-212ENST00000522912 NFE2L2Q16236 605 aa21.9■■□□□ 1.1
SREK1-212ENST00000522912 ESCO1Q5FWF5 840 aa21.9■■□□□ 1.1
SREK1-212ENST00000522912 DLG5Q8TDM6 1919 aa21.9■■□□□ 1.1
SREK1-212ENST00000522912 IL16Q14005 1332 aa21.9■■□□□ 1.1
SREK1-212ENST00000522912 NUTM2GQ5VZR2 741 aa21.9■■□□□ 1.1
SREK1-212ENST00000522912 STRCP1A6NGW2 1772 aa21.89■■□□□ 1.1
SREK1-212ENST00000522912 PAK3O75914 559 aaPredicted RBP21.89■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms