RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 NCBP3Q53F19 620 aaKnown RBP13.91□□□□□ -0.18
RAB11FIP1-204ENST00000522774 RLBP1P12271 317 aa13.9□□□□□ -0.18
RAB11FIP1-204ENST00000522774 CLUAP1Q96AJ1 413 aa13.9□□□□□ -0.18
RAB11FIP1-204ENST00000522774 FBLN1P23142 703 aa13.9□□□□□ -0.18
RAB11FIP1-204ENST00000522774 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.9□□□□□ -0.18
RAB11FIP1-204ENST00000522774 METP08581 1390 aa13.9□□□□□ -0.19
RAB11FIP1-204ENST00000522774 TMPOP42166 694 aaKnown RBP13.89□□□□□ -0.19
RAB11FIP1-204ENST00000522774 NBR1Q14596 966 aa13.89□□□□□ -0.19
RAB11FIP1-204ENST00000522774 TSR2Q969E8 191 aaKnown RBP13.89□□□□□ -0.19
RAB11FIP1-204ENST00000522774 MYH16Q9H6N6 1097 aa13.89□□□□□ -0.19
RAB11FIP1-204ENST00000522774 TRIM35Q9UPQ4 493 aa13.89□□□□□ -0.19
RAB11FIP1-204ENST00000522774 ZMYM3Q14202 1370 aa13.89□□□□□ -0.19
RAB11FIP1-204ENST00000522774 C8orf34Q49A92 452 aa13.89□□□□□ -0.19
RAB11FIP1-204ENST00000522774 PNPLA6Q8IY17 1366 aa13.88□□□□□ -0.19
RAB11FIP1-204ENST00000522774 DIAPH1O60610 1272 aaKnown RBP13.88□□□□□ -0.19
RAB11FIP1-204ENST00000522774 ATP7BP35670 1465 aa13.87□□□□□ -0.19
RAB11FIP1-204ENST00000522774 MAPK8IP3Q9UPT6 1336 aa13.87□□□□□ -0.19
RAB11FIP1-204ENST00000522774 FAM161AQ3B820 660 aa13.87□□□□□ -0.19
RAB11FIP1-204ENST00000522774 TXNDC2Q86VQ3 553 aa13.86□□□□□ -0.19
RAB11FIP1-204ENST00000522774 ESF1Q9H501 851 aaKnown RBP13.86□□□□□ -0.19
RAB11FIP1-204ENST00000522774 POLKQ9UBT6 870 aa13.85□□□□□ -0.19
RAB11FIP1-204ENST00000522774 WASLO00401 505 aaPredicted RBP13.85□□□□□ -0.19
RAB11FIP1-204ENST00000522774 PPM1GO15355 546 aaPredicted RBP13.85□□□□□ -0.19
RAB11FIP1-204ENST00000522774 EXOSC9Q06265 439 aaKnown RBP13.85□□□□□ -0.19
RAB11FIP1-204ENST00000522774 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.85□□□□□ -0.19
RAB11FIP1-204ENST00000522774 PPIP5K1Q6PFW1 1433 aa13.85□□□□□ -0.19
RAB11FIP1-204ENST00000522774 NCKAP5LQ9HCH0 1330 aa13.84□□□□□ -0.19
RAB11FIP1-204ENST00000522774 PCDHB15Q9Y5E8 787 aa13.84□□□□□ -0.19
RAB11FIP1-204ENST00000522774 RIPK4P57078 832 aa13.84□□□□□ -0.19
RAB11FIP1-204ENST00000522774 LRRC7Q96NW7 1537 aa13.84□□□□□ -0.19
RAB11FIP1-204ENST00000522774 CPSF1Q10570 1443 aaKnown RBP13.83□□□□□ -0.19
RAB11FIP1-204ENST00000522774 ZRANB1Q9UGI0 708 aa13.83□□□□□ -0.2
RAB11FIP1-204ENST00000522774 MAP2P11137 1827 aaKnown RBP13.83□□□□□ -0.2
RAB11FIP1-204ENST00000522774 CDC42BPGQ6DT37 1551 aa13.83□□□□□ -0.2
RAB11FIP1-204ENST00000522774 NME9Q86XW9 330 aa13.83□□□□□ -0.2
RAB11FIP1-204ENST00000522774 TNRQ92752 1358 aa13.83□□□□□ -0.2
RAB11FIP1-204ENST00000522774 EMILIN1Q9Y6C2 1016 aa13.82□□□□□ -0.2
RAB11FIP1-204ENST00000522774 EDC4Q6P2E9 1401 aaKnown RBP13.82□□□□□ -0.2
RAB11FIP1-204ENST00000522774 RSPH6AQ9H0K4 717 aa13.82□□□□□ -0.2
RAB11FIP1-204ENST00000522774 NUDT16Q96DE0 195 aaKnown RBP13.81□□□□□ -0.2
RAB11FIP1-204ENST00000522774 SMC4Q9NTJ3 1288 aa13.81□□□□□ -0.2
RAB11FIP1-204ENST00000522774 KNDC1Q76NI1 1749 aa13.81□□□□□ -0.2
RAB11FIP1-204ENST00000522774 IL16Q14005 1332 aa13.81□□□□□ -0.2
RAB11FIP1-204ENST00000522774 FCHSD2O94868 740 aa13.81□□□□□ -0.2
RAB11FIP1-204ENST00000522774 CT47B1P0C2W7 299 aaPredicted RBP13.81□□□□□ -0.2
RAB11FIP1-204ENST00000522774 PRKAR2BP31323 418 aa13.81□□□□□ -0.2
RAB11FIP1-204ENST00000522774 ZKSCAN2Q63HK3 967 aa13.81□□□□□ -0.2
RAB11FIP1-204ENST00000522774 SSH1Q8WYL5 1049 aa13.81□□□□□ -0.2
RAB11FIP1-204ENST00000522774 FAM135BQ49AJ0 1406 aa13.8□□□□□ -0.2
RAB11FIP1-204ENST00000522774 TECPR2O15040 1411 aa13.8□□□□□ -0.2
RAB11FIP1-204ENST00000522774 CPS1P31327 1500 aa13.8□□□□□ -0.2
RAB11FIP1-204ENST00000522774 MVPQ14764 893 aaKnown RBP13.8□□□□□ -0.2
RAB11FIP1-204ENST00000522774 LAS1LQ9Y4W2 734 aaKnown RBP13.8□□□□□ -0.2
RAB11FIP1-204ENST00000522774 UBR1Q8IWV7 1749 aa13.8□□□□□ -0.2
RAB11FIP1-204ENST00000522774 HMOX1P09601 288 aa13.79□□□□□ -0.2
RAB11FIP1-204ENST00000522774 PMFBP1Q8TBY8 1022 aa13.79□□□□□ -0.2
RAB11FIP1-204ENST00000522774 TMEM2Q9UHN6 1383 aa13.79□□□□□ -0.2
RAB11FIP1-204ENST00000522774 AAMPQ13685 434 aa13.79□□□□□ -0.2
RAB11FIP1-204ENST00000522774 DZIP1LQ8IYY4 767 aaKnown RBP13.79□□□□□ -0.2
RAB11FIP1-204ENST00000522774 DDRGK1Q96HY6 314 aa13.79□□□□□ -0.2
RAB11FIP1-204ENST00000522774 PNNQ9H307 717 aaKnown RBP13.79□□□□□ -0.2
RAB11FIP1-204ENST00000522774 FTSJ3Q8IY81 847 aaKnown RBP13.79□□□□□ -0.2
RAB11FIP1-204ENST00000522774 PHACTR3Q96KR7 559 aa13.79□□□□□ -0.2
RAB11FIP1-204ENST00000522774 TRIM27P14373 513 aa13.78□□□□□ -0.2
RAB11FIP1-204ENST00000522774 PRR36Q9H6K5 1346 aa13.78□□□□□ -0.2
RAB11FIP1-204ENST00000522774 CCDC61Q9Y6R9 512 aa13.78□□□□□ -0.2
RAB11FIP1-204ENST00000522774 VIRMAQ69YN4 1812 aaKnown RBP13.78□□□□□ -0.2
RAB11FIP1-204ENST00000522774 ROBO2Q9HCK4 1378 aa13.78□□□□□ -0.2
RAB11FIP1-204ENST00000522774 MON2Q7Z3U7 1717 aa13.78□□□□□ -0.2
RAB11FIP1-204ENST00000522774 SLC4A3P48751 1232 aa13.77□□□□□ -0.2
RAB11FIP1-204ENST00000522774 HDGFP51858 240 aaKnown RBP13.77□□□□□ -0.21
RAB11FIP1-204ENST00000522774 SIRT1Q96EB6 747 aa13.77□□□□□ -0.21
RAB11FIP1-204ENST00000522774 ADAMTS13Q76LX8 1427 aa13.77□□□□□ -0.21
RAB11FIP1-204ENST00000522774 IL13P35225 146 aa13.77□□□□□ -0.21
RAB11FIP1-204ENST00000522774 RRS1Q15050 365 aaKnown RBP13.76□□□□□ -0.21
RAB11FIP1-204ENST00000522774 NOB1Q9ULX3 412 aaKnown RBP13.76□□□□□ -0.21
RAB11FIP1-204ENST00000522774 THUMPD2Q9BTF0 503 aaKnown RBP13.76□□□□□ -0.21
RAB11FIP1-204ENST00000522774 PDZRN3Q9UPQ7 1066 aa13.76□□□□□ -0.21
RAB11FIP1-204ENST00000522774 AKAP12Q02952 1782 aa13.76□□□□□ -0.21
RAB11FIP1-204ENST00000522774 CDK12Q9NYV4 1490 aaPredicted RBP13.76□□□□□ -0.21
RAB11FIP1-204ENST00000522774 ATF7IPQ6VMQ6 1270 aa13.75□□□□□ -0.21
RAB11FIP1-204ENST00000522774 LTKP29376 864 aa13.75□□□□□ -0.21
RAB11FIP1-204ENST00000522774 NFE2L2Q16236 605 aa13.75□□□□□ -0.21
RAB11FIP1-204ENST00000522774 COG3Q96JB2 828 aa13.75□□□□□ -0.21
RAB11FIP1-204ENST00000522774 AATKQ6ZMQ8 1374 aa13.75□□□□□ -0.21
RAB11FIP1-204ENST00000522774 C3P01024 1663 aa13.75□□□□□ -0.21
RAB11FIP1-204ENST00000522774 SEC24BO95487 1268 aa13.75□□□□□ -0.21
RAB11FIP1-204ENST00000522774 DEKP35659 375 aaKnown RBP13.75□□□□□ -0.21
RAB11FIP1-204ENST00000522774 ITSN1Q15811 1721 aa13.75□□□□□ -0.21
RAB11FIP1-204ENST00000522774 RWDD1Q9H446 243 aaPredicted RBP13.75□□□□□ -0.21
RAB11FIP1-204ENST00000522774 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.74□□□□□ -0.21
RAB11FIP1-204ENST00000522774 USP19O94966 1318 aa13.74□□□□□ -0.21
RAB11FIP1-204ENST00000522774 NEFMP07197 916 aa13.74□□□□□ -0.21
RAB11FIP1-204ENST00000522774 CEBPAP49715 358 aaPredicted RBP13.74□□□□□ -0.21
RAB11FIP1-204ENST00000522774 ITPRIPQ8IWB1 547 aa13.74□□□□□ -0.21
RAB11FIP1-204ENST00000522774 RTL5Q5HYW3 569 aaPredicted RBP13.73□□□□□ -0.21
RAB11FIP1-204ENST00000522774 NUTM2FA1L443 756 aa13.72□□□□□ -0.21
RAB11FIP1-204ENST00000522774 TMEM57Q8N5G2 664 aa13.72□□□□□ -0.21
RAB11FIP1-204ENST00000522774 DDX19BQ9UMR2 479 aa13.71□□□□□ -0.21
RAB11FIP1-204ENST00000522774 PLEKHG1Q9ULL1 1385 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms