RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 PLEKHH1Q9ULM0 1364 aa14.65□□□□□ -0.06
TRIM35-204ENST00000521283 TRAK1Q9UPV9 953 aa14.65□□□□□ -0.06
TRIM35-204ENST00000521283 SOCS7O14512 581 aa14.64□□□□□ -0.07
TRIM35-204ENST00000521283 MEX3CQ5U5Q3 659 aaKnown RBP14.64□□□□□ -0.07
TRIM35-204ENST00000521283 ZNF772Q68DY9 489 aaPredicted RBP14.63□□□□□ -0.07
TRIM35-204ENST00000521283 ILDR2Q71H61 639 aa14.63□□□□□ -0.07
TRIM35-204ENST00000521283 VASPP50552 380 aaPredicted RBP14.62□□□□□ -0.07
TRIM35-204ENST00000521283 PSME1Q06323 249 aa14.62□□□□□ -0.07
TRIM35-204ENST00000521283 L3MBTL2Q969R5 705 aa14.62□□□□□ -0.07
TRIM35-204ENST00000521283 ARHGEF28Q8N1W1 1705 aaKnown RBP14.61□□□□□ -0.07
TRIM35-204ENST00000521283 MAP3K13O43283 966 aa14.61□□□□□ -0.07
TRIM35-204ENST00000521283 PELP1Q8IZL8 1130 aaKnown RBP14.61□□□□□ -0.07
TRIM35-204ENST00000521283 PNPLA6Q8IY17 1366 aa14.6□□□□□ -0.07
TRIM35-204ENST00000521283 WASLO00401 505 aaPredicted RBP14.6□□□□□ -0.07
TRIM35-204ENST00000521283 FOXO3O43524 673 aa14.6□□□□□ -0.07
TRIM35-204ENST00000521283 PHF8Q9UPP1 1060 aa14.6□□□□□ -0.07
TRIM35-204ENST00000521283 NEUROD1Q13562 356 aa14.59□□□□□ -0.07
TRIM35-204ENST00000521283 SAFB2Q14151 953 aaKnown RBP eCLIP14.59□□□□□ -0.07
TRIM35-204ENST00000521283 SIN3AQ96ST3 1273 aa14.59□□□□□ -0.07
TRIM35-204ENST00000521283 RGPD8O14715 1765 aaPredicted RBP14.59□□□□□ -0.07
TRIM35-204ENST00000521283 COL22A1Q8NFW1 1626 aaPredicted RBP14.59□□□□□ -0.07
TRIM35-204ENST00000521283 PXDNQ92626 1479 aa14.58□□□□□ -0.08
TRIM35-204ENST00000521283 TULP4Q9NRJ4 1543 aa14.58□□□□□ -0.08
TRIM35-204ENST00000521283 ASTLQ6HA08 431 aaPredicted RBP14.58□□□□□ -0.08
TRIM35-204ENST00000521283 DDX17Q92841 729 aaKnown RBP14.58□□□□□ -0.08
TRIM35-204ENST00000521283 NUTM2FA1L443 756 aa14.57□□□□□ -0.08
TRIM35-204ENST00000521283 RGS17Q9UGC6 210 aaPredicted RBP14.57□□□□□ -0.08
TRIM35-204ENST00000521283 MINK1Q8N4C8 1332 aaPredicted RBP14.57□□□□□ -0.08
TRIM35-204ENST00000521283 ITSN1Q15811 1721 aa14.57□□□□□ -0.08
TRIM35-204ENST00000521283 LRP6O75581 1613 aa14.56□□□□□ -0.08
TRIM35-204ENST00000521283 NUTM2BA6NNL0 878 aaPredicted RBP14.56□□□□□ -0.08
TRIM35-204ENST00000521283 NUTM2EB1AL46 878 aaPredicted RBP14.56□□□□□ -0.08
TRIM35-204ENST00000521283 ATMINO43313 823 aaPredicted RBP14.56□□□□□ -0.08
TRIM35-204ENST00000521283 KRT28Q7Z3Y7 464 aa14.56□□□□□ -0.08
TRIM35-204ENST00000521283 NUTM2AQ8IVF1 878 aaPredicted RBP14.56□□□□□ -0.08
TRIM35-204ENST00000521283 TRPC6Q9Y210 931 aa14.56□□□□□ -0.08
TRIM35-204ENST00000521283 SBNO1A3KN83 1393 aa14.56□□□□□ -0.08
TRIM35-204ENST00000521283 TONSLQ96HA7 1378 aa14.56□□□□□ -0.08
TRIM35-204ENST00000521283 SPATA31A3Q5VYP0 1347 aa14.55□□□□□ -0.08
TRIM35-204ENST00000521283 GPRASP1Q5JY77 1395 aa14.55□□□□□ -0.08
TRIM35-204ENST00000521283 TRPM1Q7Z4N2 1603 aa14.55□□□□□ -0.08
TRIM35-204ENST00000521283 NBPF1Q3BBV0 1214 aa14.54□□□□□ -0.08
TRIM35-204ENST00000521283 HIRIP3Q9BW71 556 aaPredicted RBP14.54□□□□□ -0.08
TRIM35-204ENST00000521283 CLSPNQ9HAW4 1339 aa14.54□□□□□ -0.08
TRIM35-204ENST00000521283 CENPJQ9HC77 1338 aaPredicted RBP14.54□□□□□ -0.08
TRIM35-204ENST00000521283 ARHGEF10O15013 1369 aa14.54□□□□□ -0.08
TRIM35-204ENST00000521283 USP32Q8NFA0 1604 aa14.53□□□□□ -0.08
TRIM35-204ENST00000521283 ROCK2O75116 1388 aaKnown RBP14.53□□□□□ -0.08
TRIM35-204ENST00000521283 FAM212AQ96EL1 285 aa14.53□□□□□ -0.08
TRIM35-204ENST00000521283 SLC24A1O60721 1099 aa14.52□□□□□ -0.09
TRIM35-204ENST00000521283 CDK19Q9BWU1 502 aa14.52□□□□□ -0.09
TRIM35-204ENST00000521283 TIMELESSQ9UNS1 1208 aa14.52□□□□□ -0.09
TRIM35-204ENST00000521283 TNS3Q68CZ2 1445 aa14.51□□□□□ -0.09
TRIM35-204ENST00000521283 POTEAQ6S8J7 498 aa14.51□□□□□ -0.09
TRIM35-204ENST00000521283 NGDNQ8NEJ9 315 aaKnown RBP14.51□□□□□ -0.09
TRIM35-204ENST00000521283 NUDT16Q96DE0 195 aaKnown RBP14.51□□□□□ -0.09
TRIM35-204ENST00000521283 NGLY1Q96IV0 654 aa14.51□□□□□ -0.09
TRIM35-204ENST00000521283 MARF1Q9Y4F3 1742 aaKnown RBP14.51□□□□□ -0.09
TRIM35-204ENST00000521283 AFF2P51816 1311 aa14.5□□□□□ -0.09
TRIM35-204ENST00000521283 C8orf37Q96NL8 207 aa14.5□□□□□ -0.09
TRIM35-204ENST00000521283 BRD4O60885 1362 aaPredicted RBP14.49□□□□□ -0.09
TRIM35-204ENST00000521283 RXRBP28702 533 aa14.49□□□□□ -0.09
TRIM35-204ENST00000521283 XPCQ01831 940 aaPredicted RBP14.49□□□□□ -0.09
TRIM35-204ENST00000521283 FNBP4Q8N3X1 1017 aaPredicted RBP14.49□□□□□ -0.09
TRIM35-204ENST00000521283 PMFBP1Q8TBY8 1022 aa14.49□□□□□ -0.09
TRIM35-204ENST00000521283 ATP7BP35670 1465 aa14.49□□□□□ -0.09
TRIM35-204ENST00000521283 CDK12Q9NYV4 1490 aaPredicted RBP14.49□□□□□ -0.09
TRIM35-204ENST00000521283 QRICH2Q9H0J4 1663 aa14.49□□□□□ -0.09
TRIM35-204ENST00000521283 EVC2Q86UK5 1308 aa14.48□□□□□ -0.09
TRIM35-204ENST00000521283 PRR36Q9H6K5 1346 aa14.48□□□□□ -0.09
TRIM35-204ENST00000521283 PLEKHG3A1L390 1219 aa14.48□□□□□ -0.09
TRIM35-204ENST00000521283 ADAMTS2O95450 1211 aa14.48□□□□□ -0.09
TRIM35-204ENST00000521283 ATN1P54259 1190 aaPredicted RBP14.48□□□□□ -0.09
TRIM35-204ENST00000521283 POTEB2H3BUK9 544 aa14.47□□□□□ -0.09
TRIM35-204ENST00000521283 HAP1P54257 671 aaPredicted RBP14.47□□□□□ -0.09
TRIM35-204ENST00000521283 SRPK2P78362 688 aaKnown RBP14.47□□□□□ -0.09
TRIM35-204ENST00000521283 KLHL34Q8N239 644 aa14.47□□□□□ -0.09
TRIM35-204ENST00000521283 SGIP1Q9BQI5 828 aa14.47□□□□□ -0.09
TRIM35-204ENST00000521283 BMP2KQ9NSY1 1161 aaPredicted RBP14.47□□□□□ -0.09
TRIM35-204ENST00000521283 RBM6P78332 1123 aaKnown RBP14.46□□□□□ -0.09
TRIM35-204ENST00000521283 CARD11Q9BXL7 1154 aa14.46□□□□□ -0.09
TRIM35-204ENST00000521283 QTRT2Q9H974 415 aaKnown RBP14.46□□□□□ -0.09
TRIM35-204ENST00000521283 USP21Q9UK80 565 aa14.46□□□□□ -0.09
TRIM35-204ENST00000521283 TRPC5Q9UL62 973 aaPredicted RBP14.46□□□□□ -0.09
TRIM35-204ENST00000521283 POLR3AO14802 1390 aaPredicted RBP14.46□□□□□ -0.1
TRIM35-204ENST00000521283 SBNO2Q9Y2G9 1366 aa14.46□□□□□ -0.1
TRIM35-204ENST00000521283 TOPAZ1Q8N9V7 1692 aa14.46□□□□□ -0.1
TRIM35-204ENST00000521283 RALGAPBQ86X10 1494 aa14.45□□□□□ -0.1
TRIM35-204ENST00000521283 DCAF8Q5TAQ9 597 aa14.45□□□□□ -0.1
TRIM35-204ENST00000521283 LMOD2Q6P5Q4 547 aa14.45□□□□□ -0.1
TRIM35-204ENST00000521283 TRPM3Q9HCF6 1732 aaPredicted RBP14.45□□□□□ -0.1
TRIM35-204ENST00000521283 PCDHB13Q9Y5F0 798 aa14.45□□□□□ -0.1
TRIM35-204ENST00000521283 ALS2Q96Q42 1657 aa14.44□□□□□ -0.1
TRIM35-204ENST00000521283 TIE1P35590 1138 aa14.43□□□□□ -0.1
TRIM35-204ENST00000521283 NBPF8Q3BBV2 869 aa14.43□□□□□ -0.1
TRIM35-204ENST00000521283 IFNLR1Q8IU57 520 aaPredicted RBP14.43□□□□□ -0.1
TRIM35-204ENST00000521283 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.43□□□□□ -0.1
TRIM35-204ENST00000521283 ACEP12821 1306 aa14.42□□□□□ -0.1
TRIM35-204ENST00000521283 IFNL1Q8IU54 200 aa14.42□□□□□ -0.1
TRIM35-204ENST00000521283 PUS7Q96PZ0 661 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms