RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 ILDR1Q86SU0 546 aaPredicted RBP24.06■■□□□ 1.44
TRAM1-203ENST00000520700 EDC4Q6P2E9 1401 aaKnown RBP24.06■■□□□ 1.44
TRAM1-203ENST00000520700 TTC21BQ7Z4L5 1316 aa24.06■■□□□ 1.44
TRAM1-203ENST00000520700 TRPM3Q9HCF6 1732 aaPredicted RBP24.05■■□□□ 1.44
TRAM1-203ENST00000520700 TNS3Q68CZ2 1445 aa24.05■■□□□ 1.44
TRAM1-203ENST00000520700 ARHGEF10O15013 1369 aa24.04■■□□□ 1.44
TRAM1-203ENST00000520700 JCADQ9P266 1359 aa24.04■■□□□ 1.44
TRAM1-203ENST00000520700 CARD14Q9BXL6 1004 aa24.04■■□□□ 1.44
TRAM1-203ENST00000520700 PANK3Q9H999 370 aa24.04■■□□□ 1.44
TRAM1-203ENST00000520700 ZNF316A6NFI3 1004 aaPredicted RBP24.03■■□□□ 1.44
TRAM1-203ENST00000520700 MON2Q7Z3U7 1717 aa24.03■■□□□ 1.44
TRAM1-203ENST00000520700 PNPLA6Q8IY17 1366 aa24.02■■□□□ 1.44
TRAM1-203ENST00000520700 PAK3O75914 559 aaPredicted RBP24.01■■□□□ 1.43
TRAM1-203ENST00000520700 ALS2Q96Q42 1657 aa23.99■■□□□ 1.43
TRAM1-203ENST00000520700 ABTB2Q8N961 1025 aa23.99■■□□□ 1.43
TRAM1-203ENST00000520700 NRKQ7Z2Y5 1582 aa23.99■■□□□ 1.43
TRAM1-203ENST00000520700 USP31Q70CQ4 1352 aa23.98■■□□□ 1.43
TRAM1-203ENST00000520700 PER1O15534 1290 aaPredicted RBP23.97■■□□□ 1.43
TRAM1-203ENST00000520700 SPATA31A6Q5VVP1 1343 aa23.97■■□□□ 1.43
TRAM1-203ENST00000520700 NLRP13Q86W25 1043 aa23.97■■□□□ 1.43
TRAM1-203ENST00000520700 SHPRHQ149N8 1683 aa23.95■■□□□ 1.43
TRAM1-203ENST00000520700 COL22A1Q8NFW1 1626 aaPredicted RBP23.95■■□□□ 1.43
TRAM1-203ENST00000520700 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.95■■□□□ 1.42
TRAM1-203ENST00000520700 NSD3Q9BZ95 1437 aa23.94■■□□□ 1.42
TRAM1-203ENST00000520700 FYB1O15117 783 aa23.94■■□□□ 1.42
TRAM1-203ENST00000520700 NLRP6P59044 892 aa23.94■■□□□ 1.42
TRAM1-203ENST00000520700 LMOD2Q6P5Q4 547 aa23.94■■□□□ 1.42
TRAM1-203ENST00000520700 USP19O94966 1318 aa23.93■■□□□ 1.42
TRAM1-203ENST00000520700 CGNL1Q0VF96 1302 aa23.92■■□□□ 1.42
TRAM1-203ENST00000520700 MED1Q15648 1581 aaPredicted RBP23.92■■□□□ 1.42
TRAM1-203ENST00000520700 NME9Q86XW9 330 aa23.92■■□□□ 1.42
TRAM1-203ENST00000520700 KNSTRNQ9Y448 316 aa23.92■■□□□ 1.42
TRAM1-203ENST00000520700 PIK3C2AO00443 1686 aa23.89■■□□□ 1.42
TRAM1-203ENST00000520700 NPC1L1Q9UHC9 1359 aa23.89■■□□□ 1.41
TRAM1-203ENST00000520700 AMER1Q5JTC6 1135 aaPredicted RBP23.88■■□□□ 1.41
TRAM1-203ENST00000520700 USP54Q70EL1 1684 aa23.88■■□□□ 1.41
TRAM1-203ENST00000520700 NSD2O96028 1365 aa23.88■■□□□ 1.41
TRAM1-203ENST00000520700 OVOS2A0A0J9YW53 1432 aa23.87■■□□□ 1.41
TRAM1-203ENST00000520700 OVOS2Q6IE36 1432 aa23.87■■□□□ 1.41
TRAM1-203ENST00000520700 NUTM2GQ5VZR2 741 aa23.87■■□□□ 1.41
TRAM1-203ENST00000520700 COG3Q96JB2 828 aa23.87■■□□□ 1.41
TRAM1-203ENST00000520700 GCP02774 474 aa23.86■■□□□ 1.41
TRAM1-203ENST00000520700 DDX10Q13206 875 aaKnown RBP23.86■■□□□ 1.41
TRAM1-203ENST00000520700 KCNH5Q8NCM2 988 aa23.86■■□□□ 1.41
TRAM1-203ENST00000520700 ZRANB1Q9UGI0 708 aa23.86■■□□□ 1.41
TRAM1-203ENST00000520700 CABLES1Q8TDN4 633 aa23.85■■□□□ 1.41
TRAM1-203ENST00000520700 SLIT3O75094 1523 aa23.84■■□□□ 1.41
TRAM1-203ENST00000520700 GGNBP2Q9H3C7 697 aa23.84■■□□□ 1.41
TRAM1-203ENST00000520700 CRYBG1Q9Y4K1 1723 aa23.82■■□□□ 1.4
TRAM1-203ENST00000520700 CPDO75976 1380 aa23.8■■□□□ 1.4
TRAM1-203ENST00000520700 NUTM2BA6NNL0 878 aaPredicted RBP23.8■■□□□ 1.4
TRAM1-203ENST00000520700 NUTM2EB1AL46 878 aaPredicted RBP23.8■■□□□ 1.4
TRAM1-203ENST00000520700 NUTM2AQ8IVF1 878 aaPredicted RBP23.8■■□□□ 1.4
TRAM1-203ENST00000520700 MARF1Q9Y4F3 1742 aaKnown RBP23.8■■□□□ 1.4
TRAM1-203ENST00000520700 HAP1P54257 671 aaPredicted RBP23.79■■□□□ 1.4
TRAM1-203ENST00000520700 LRP6O75581 1613 aa23.79■■□□□ 1.4
TRAM1-203ENST00000520700 KIF20BQ96Q89 1820 aa23.78■■□□□ 1.4
TRAM1-203ENST00000520700 ABCA3Q99758 1704 aa23.77■■□□□ 1.4
TRAM1-203ENST00000520700 ARHGEF25Q86VW2 580 aa23.77■■□□□ 1.4
TRAM1-203ENST00000520700 PHRF1Q9P1Y6 1649 aaKnown RBP23.77■■□□□ 1.4
TRAM1-203ENST00000520700 AATKQ6ZMQ8 1374 aa23.76■■□□□ 1.39
TRAM1-203ENST00000520700 NFAT5O94916 1531 aa23.75■■□□□ 1.39
TRAM1-203ENST00000520700 FAM83GA6ND36 823 aa23.74■■□□□ 1.39
TRAM1-203ENST00000520700 ADAMTS2O95450 1211 aa23.74■■□□□ 1.39
TRAM1-203ENST00000520700 MORC1Q86VD1 984 aa23.74■■□□□ 1.39
TRAM1-203ENST00000520700 PLEKHG5O94827 1062 aa23.73■■□□□ 1.39
TRAM1-203ENST00000520700 ZC3H6P61129 1189 aaKnown RBP23.73■■□□□ 1.39
TRAM1-203ENST00000520700 KIAA0232Q92628 1395 aa23.73■■□□□ 1.39
TRAM1-203ENST00000520700 FNBP4Q8N3X1 1017 aaPredicted RBP23.72■■□□□ 1.39
TRAM1-203ENST00000520700 ANKRD26Q9UPS8 1709 aa23.72■■□□□ 1.39
TRAM1-203ENST00000520700 CC2D1BQ5T0F9 858 aaKnown RBP23.71■■□□□ 1.39
TRAM1-203ENST00000520700 PRDM11Q9NQV5 511 aa23.71■■□□□ 1.39
TRAM1-203ENST00000520700 KIF24Q5T7B8 1368 aa23.7■■□□□ 1.38
TRAM1-203ENST00000520700 MEX3CQ5U5Q3 659 aaKnown RBP23.7■■□□□ 1.38
TRAM1-203ENST00000520700 NGLY1Q96IV0 654 aa23.68■■□□□ 1.38
TRAM1-203ENST00000520700 SLIT2O94813 1529 aa23.68■■□□□ 1.38
TRAM1-203ENST00000520700 ABCC6O95255 1503 aa23.68■■□□□ 1.38
TRAM1-203ENST00000520700 MAP3K19Q56UN5 1328 aa23.67■■□□□ 1.38
TRAM1-203ENST00000520700 SOX12O15370 315 aa23.67■■□□□ 1.38
TRAM1-203ENST00000520700 C8orf37Q96NL8 207 aa23.67■■□□□ 1.38
TRAM1-203ENST00000520700 COL14A1Q05707 1796 aaKnown RBP23.66■■□□□ 1.38
TRAM1-203ENST00000520700 FBLN1P23142 703 aa23.66■■□□□ 1.38
TRAM1-203ENST00000520700 IP6K1Q92551 441 aa23.66■■□□□ 1.38
TRAM1-203ENST00000520700 POLKQ9UBT6 870 aa23.66■■□□□ 1.38
TRAM1-203ENST00000520700 CHRNA2Q15822 529 aa23.65■■□□□ 1.38
TRAM1-203ENST00000520700 RTL1A6NKG5 1358 aa23.65■■□□□ 1.38
TRAM1-203ENST00000520700 PARD3Q8TEW0 1356 aa23.65■■□□□ 1.38
TRAM1-203ENST00000520700 RALBP1Q15311 655 aa23.64■■□□□ 1.37
TRAM1-203ENST00000520700 COL18A1P39060 1754 aa23.63■■□□□ 1.37
TRAM1-203ENST00000520700 RRS1Q15050 365 aaKnown RBP23.63■■□□□ 1.37
TRAM1-203ENST00000520700 AXIN2Q9Y2T1 843 aa23.63■■□□□ 1.37
TRAM1-203ENST00000520700 BCL9LQ86UU0 1499 aa23.62■■□□□ 1.37
TRAM1-203ENST00000520700 AFF2P51816 1311 aa23.62■■□□□ 1.37
TRAM1-203ENST00000520700 SMG6Q86US8 1419 aaKnown RBP23.62■■□□□ 1.37
TRAM1-203ENST00000520700 HOXC9P31274 260 aa23.62■■□□□ 1.37
TRAM1-203ENST00000520700 UNC5CLQ8IV45 518 aa23.62■■□□□ 1.37
TRAM1-203ENST00000520700 BTG4Q9NY30 223 aa23.62■■□□□ 1.37
TRAM1-203ENST00000520700 LMO7Q8WWI1 1683 aa23.62■■□□□ 1.37
TRAM1-203ENST00000520700 BLMP54132 1417 aaPredicted RBP23.61■■□□□ 1.37
TRAM1-203ENST00000520700 TNNT2P45379 298 aaPredicted RBP23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms