RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 TECPR2O15040 1411 aa33.37■■■□□ 2.93
COL13A1-213ENST00000520267 FAM135BQ49AJ0 1406 aa33.37■■■□□ 2.93
COL13A1-213ENST00000520267 DIAPH1O60610 1272 aaKnown RBP33.36■■■□□ 2.93
COL13A1-213ENST00000520267 BACH2Q9BYV9 841 aa33.36■■■□□ 2.93
COL13A1-213ENST00000520267 CPSF1Q10570 1443 aaKnown RBP33.36■■■□□ 2.93
COL13A1-213ENST00000520267 CPS1P31327 1500 aa33.35■■■□□ 2.93
COL13A1-213ENST00000520267 ANP32AP39687 249 aaKnown RBP33.35■■■□□ 2.93
COL13A1-213ENST00000520267 SIRT1Q96EB6 747 aa33.35■■■□□ 2.93
COL13A1-213ENST00000520267 TMPOP42166 694 aaKnown RBP33.34■■■□□ 2.93
COL13A1-213ENST00000520267 MYH16Q9H6N6 1097 aa33.34■■■□□ 2.93
COL13A1-213ENST00000520267 FBLN1P23142 703 aa33.33■■■□□ 2.93
COL13A1-213ENST00000520267 CANXP27824 592 aaKnown RBP33.33■■■□□ 2.93
COL13A1-213ENST00000520267 PANK1Q8TE04 598 aa33.32■■■□□ 2.92
COL13A1-213ENST00000520267 MAP2P11137 1827 aaKnown RBP33.32■■■□□ 2.92
COL13A1-213ENST00000520267 FRAT1Q92837 279 aaPredicted RBP33.31■■■□□ 2.92
COL13A1-213ENST00000520267 NUDT16Q96DE0 195 aaKnown RBP33.31■■■□□ 2.92
COL13A1-213ENST00000520267 MAPK8IP3Q9UPT6 1336 aa33.31■■■□□ 2.92
COL13A1-213ENST00000520267 POLKQ9UBT6 870 aa33.31■■■□□ 2.92
COL13A1-213ENST00000520267 TRIM35Q9UPQ4 493 aa33.3■■■□□ 2.92
COL13A1-213ENST00000520267 NCKAP5LQ9HCH0 1330 aa33.3■■■□□ 2.92
COL13A1-213ENST00000520267 EDC4Q6P2E9 1401 aaKnown RBP33.3■■■□□ 2.92
COL13A1-213ENST00000520267 ADAMTS13Q76LX8 1427 aa33.29■■■□□ 2.92
COL13A1-213ENST00000520267 COG6Q9Y2V7 657 aa33.28■■■□□ 2.92
COL13A1-213ENST00000520267 CDC42BPGQ6DT37 1551 aa33.27■■■□□ 2.92
COL13A1-213ENST00000520267 IPO9Q96P70 1041 aaKnown RBP33.27■■■□□ 2.92
COL13A1-213ENST00000520267 PPM1GO15355 546 aaPredicted RBP33.26■■■□□ 2.92
COL13A1-213ENST00000520267 CEBPAP49715 358 aaPredicted RBP33.26■■■□□ 2.92
COL13A1-213ENST00000520267 BCL2L13Q9BXK5 485 aa33.26■■■□□ 2.92
COL13A1-213ENST00000520267 NME9Q86XW9 330 aa33.26■■■□□ 2.91
COL13A1-213ENST00000520267 NOP58Q9Y2X3 529 aaKnown RBP33.26■■■□□ 2.91
COL13A1-213ENST00000520267 MON2Q7Z3U7 1717 aa33.26■■■□□ 2.91
COL13A1-213ENST00000520267 ROBO2Q9HCK4 1378 aa33.25■■■□□ 2.91
COL13A1-213ENST00000520267 LTKP29376 864 aa33.25■■■□□ 2.91
COL13A1-213ENST00000520267 TSR2Q969E8 191 aaKnown RBP33.25■■■□□ 2.91
COL13A1-213ENST00000520267 CCDC61Q9Y6R9 512 aa33.25■■■□□ 2.91
COL13A1-213ENST00000520267 ZRANB1Q9UGI0 708 aa33.24■■■□□ 2.91
COL13A1-213ENST00000520267 TNNQ9UQP3 1299 aa33.23■■■□□ 2.91
COL13A1-213ENST00000520267 AKAP12Q02952 1782 aa33.23■■■□□ 2.91
COL13A1-213ENST00000520267 PNNQ9H307 717 aaKnown RBP33.22■■■□□ 2.91
COL13A1-213ENST00000520267 LRRC7Q96NW7 1537 aa33.22■■■□□ 2.91
COL13A1-213ENST00000520267 RIPK4P57078 832 aa33.22■■■□□ 2.91
COL13A1-213ENST00000520267 PLEKHG1Q9ULL1 1385 aa33.21■■■□□ 2.91
COL13A1-213ENST00000520267 CLUAP1Q96AJ1 413 aa33.21■■■□□ 2.91
COL13A1-213ENST00000520267 ITSN1Q15811 1721 aa33.21■■■□□ 2.91
COL13A1-213ENST00000520267 PAK3O75914 559 aaPredicted RBP33.21■■■□□ 2.91
COL13A1-213ENST00000520267 IGHDP01880 384 aa33.21■■■□□ 2.91
COL13A1-213ENST00000520267 NPM2Q86SE8 214 aaKnown RBP33.21■■■□□ 2.91
COL13A1-213ENST00000520267 PRR36Q9H6K5 1346 aa33.2■■■□□ 2.91
COL13A1-213ENST00000520267 FCHSD2O94868 740 aa33.2■■■□□ 2.91
COL13A1-213ENST00000520267 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.19■■■□□ 2.9
COL13A1-213ENST00000520267 RLBP1P12271 317 aa33.19■■■□□ 2.9
COL13A1-213ENST00000520267 EMILIN1Q9Y6C2 1016 aa33.19■■■□□ 2.9
COL13A1-213ENST00000520267 RSPH6AQ9H0K4 717 aa33.18■■■□□ 2.9
COL13A1-213ENST00000520267 C3P01024 1663 aa33.18■■■□□ 2.9
COL13A1-213ENST00000520267 EXOSC9Q06265 439 aaKnown RBP33.17■■■□□ 2.9
COL13A1-213ENST00000520267 IL16Q14005 1332 aa33.17■■■□□ 2.9
COL13A1-213ENST00000520267 CT47B1P0C2W7 299 aaPredicted RBP33.15■■■□□ 2.9
COL13A1-213ENST00000520267 PRKAR2BP31323 418 aa33.15■■■□□ 2.9
COL13A1-213ENST00000520267 AATKQ6ZMQ8 1374 aa33.13■■■□□ 2.89
COL13A1-213ENST00000520267 COG3Q96JB2 828 aa33.13■■■□□ 2.89
COL13A1-213ENST00000520267 CDK12Q9NYV4 1490 aaPredicted RBP33.12■■■□□ 2.89
COL13A1-213ENST00000520267 RGS3P49796 1198 aa33.11■■■□□ 2.89
COL13A1-213ENST00000520267 SLC26A8Q96RN1 970 aa33.11■■■□□ 2.89
COL13A1-213ENST00000520267 ZNF692Q9BU19 519 aaPredicted RBP33.11■■■□□ 2.89
COL13A1-213ENST00000520267 PTPRUQ92729 1446 aa33.11■■■□□ 2.89
COL13A1-213ENST00000520267 HMOX1P09601 288 aa33.11■■■□□ 2.89
COL13A1-213ENST00000520267 IL13P35225 146 aa33.11■■■□□ 2.89
COL13A1-213ENST00000520267 PLPPR3Q6T4P5 718 aa33.1■■■□□ 2.89
COL13A1-213ENST00000520267 ZBTB47Q9UFB7 747 aaPredicted RBP33.1■■■□□ 2.89
COL13A1-213ENST00000520267 FER1L4A9Z1Z3 1794 aa33.08■■■□□ 2.89
COL13A1-213ENST00000520267 TOPAZ1Q8N9V7 1692 aa33.08■■■□□ 2.89
COL13A1-213ENST00000520267 PHACTR3Q96KR7 559 aa33.08■■■□□ 2.89
COL13A1-213ENST00000520267 EID1Q9Y6B2 187 aa33.08■■■□□ 2.89
COL13A1-213ENST00000520267 ZKSCAN2Q63HK3 967 aa33.07■■■□□ 2.88
COL13A1-213ENST00000520267 AAMPQ13685 434 aa33.07■■■□□ 2.88
COL13A1-213ENST00000520267 RRS1Q15050 365 aaKnown RBP33.07■■■□□ 2.88
COL13A1-213ENST00000520267 SLIT1O75093 1534 aa33.06■■■□□ 2.88
COL13A1-213ENST00000520267 SMC4Q9NTJ3 1288 aa33.06■■■□□ 2.88
COL13A1-213ENST00000520267 NEFMP07197 916 aa33.05■■■□□ 2.88
COL13A1-213ENST00000520267 ARHGAP23Q9P227 1491 aa33.05■■■□□ 2.88
COL13A1-213ENST00000520267 NUTM2FA1L443 756 aa33.04■■■□□ 2.88
COL13A1-213ENST00000520267 FAM161AQ3B820 660 aa33.04■■■□□ 2.88
COL13A1-213ENST00000520267 SSH1Q8WYL5 1049 aa33.04■■■□□ 2.88
COL13A1-213ENST00000520267 PCDHB15Q9Y5E8 787 aa33.04■■■□□ 2.88
COL13A1-213ENST00000520267 NRKQ7Z2Y5 1582 aa33.04■■■□□ 2.88
COL13A1-213ENST00000520267 C8orf34Q49A92 452 aa33.04■■■□□ 2.88
COL13A1-213ENST00000520267 NFE2L2Q16236 605 aa33.03■■■□□ 2.88
COL13A1-213ENST00000520267 ACEP12821 1306 aa33.02■■■□□ 2.88
COL13A1-213ENST00000520267 MVPQ14764 893 aaKnown RBP33.02■■■□□ 2.88
COL13A1-213ENST00000520267 DZIP1LQ8IYY4 767 aaKnown RBP33.02■■■□□ 2.88
COL13A1-213ENST00000520267 TTC21BQ7Z4L5 1316 aa33■■■□□ 2.87
COL13A1-213ENST00000520267 PMFBP1Q8TBY8 1022 aa33■■■□□ 2.87
COL13A1-213ENST00000520267 PLEKHG3A1L390 1219 aa32.99■■■□□ 2.87
COL13A1-213ENST00000520267 AMOTL2Q9Y2J4 779 aa32.99■■■□□ 2.87
COL13A1-213ENST00000520267 FTSJ3Q8IY81 847 aaKnown RBP32.99■■■□□ 2.87
COL13A1-213ENST00000520267 TRIM27P14373 513 aa32.97■■■□□ 2.87
COL13A1-213ENST00000520267 TBX22Q9Y458 520 aa32.97■■■□□ 2.87
COL13A1-213ENST00000520267 THUMPD2Q9BTF0 503 aaKnown RBP32.95■■■□□ 2.87
COL13A1-213ENST00000520267 NOB1Q9ULX3 412 aaKnown RBP32.95■■■□□ 2.87
COL13A1-213ENST00000520267 LAS1LQ9Y4W2 734 aaKnown RBP32.95■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms