RNA–Protein interactions for RNA: ENST00000520202.5

CCDC25-206, Transcript of coiled-coil domain containing 25, humanhuman

TSL 1 (best)

Gene CCDC25, Length 1,734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25-206ENST00000520202 NCBP3Q53F19 620 aaKnown RBP17.38■□□□□ 0.37
CCDC25-206ENST00000520202 ZNF521Q96K83 1311 aa17.38■□□□□ 0.37
CCDC25-206ENST00000520202 CCDC146Q8IYE0 955 aa17.37■□□□□ 0.37
CCDC25-206ENST00000520202 COG3Q96JB2 828 aa17.37■□□□□ 0.37
CCDC25-206ENST00000520202 APAF1O14727 1248 aa17.36■□□□□ 0.37
CCDC25-206ENST00000520202 PNNQ9H307 717 aaKnown RBP17.36■□□□□ 0.37
CCDC25-206ENST00000520202 AATKQ6ZMQ8 1374 aa17.36■□□□□ 0.37
CCDC25-206ENST00000520202 RCAN3Q9UKA8 241 aa17.35■□□□□ 0.37
CCDC25-206ENST00000520202 PNPLA6Q8IY17 1366 aa17.35■□□□□ 0.37
CCDC25-206ENST00000520202 ACEP12821 1306 aa17.35■□□□□ 0.37
CCDC25-206ENST00000520202 COL3A1P02461 1466 aaPredicted RBP17.35■□□□□ 0.37
CCDC25-206ENST00000520202 U2AF1L5P0DN76 240 aaPredicted RBP17.34■□□□□ 0.37
CCDC25-206ENST00000520202 USP6P35125 1406 aa17.34■□□□□ 0.37
CCDC25-206ENST00000520202 U2AF1Q01081 240 aaKnown RBP eCLIP17.34■□□□□ 0.37
CCDC25-206ENST00000520202 NCKAP5LQ9HCH0 1330 aa17.34■□□□□ 0.37
CCDC25-206ENST00000520202 NRKQ7Z2Y5 1582 aa17.33■□□□□ 0.37
CCDC25-206ENST00000520202 DIAPH1O60610 1272 aaKnown RBP17.33■□□□□ 0.37
CCDC25-206ENST00000520202 CDCA7LQ96GN5 454 aa17.33■□□□□ 0.37
CCDC25-206ENST00000520202 TTC21AQ8NDW8 1320 aa17.33■□□□□ 0.36
CCDC25-206ENST00000520202 NME9Q86XW9 330 aa17.33■□□□□ 0.36
CCDC25-206ENST00000520202 FMN2Q9NZ56 1722 aa17.32■□□□□ 0.36
CCDC25-206ENST00000520202 PPP4R2Q9NY27 417 aa17.32■□□□□ 0.36
CCDC25-206ENST00000520202 NKTRP30414 1462 aaKnown RBP17.31■□□□□ 0.36
CCDC25-206ENST00000520202 IQSEC2Q5JU85 1478 aa17.31■□□□□ 0.36
CCDC25-206ENST00000520202 TTC21BQ7Z4L5 1316 aa17.31■□□□□ 0.36
CCDC25-206ENST00000520202 E9PSI1 815 aa17.31■□□□□ 0.36
CCDC25-206ENST00000520202 CDK12Q9NYV4 1490 aaPredicted RBP17.31■□□□□ 0.36
CCDC25-206ENST00000520202 CCDC27Q2M243 656 aa17.3■□□□□ 0.36
CCDC25-206ENST00000520202 POLKQ9UBT6 870 aa17.3■□□□□ 0.36
CCDC25-206ENST00000520202 NUTM2FA1L443 756 aa17.3■□□□□ 0.36
CCDC25-206ENST00000520202 U2SURPO15042 1029 aaKnown RBP17.3■□□□□ 0.36
CCDC25-206ENST00000520202 IRX6P78412 446 aaPredicted RBP17.3■□□□□ 0.36
CCDC25-206ENST00000520202 SLFN5Q08AF3 891 aa17.3■□□□□ 0.36
CCDC25-206ENST00000520202 TCP11L2Q8N4U5 519 aa17.29■□□□□ 0.36
CCDC25-206ENST00000520202 NGDNQ8NEJ9 315 aaKnown RBP17.29■□□□□ 0.36
CCDC25-206ENST00000520202 MAP2P11137 1827 aaKnown RBP17.28■□□□□ 0.36
CCDC25-206ENST00000520202 DUSP27Q5VZP5 1158 aa17.28■□□□□ 0.36
CCDC25-206ENST00000520202 ADGRL3Q9HAR2 1447 aa17.28■□□□□ 0.36
CCDC25-206ENST00000520202 NWD1Q149M9 1564 aa17.28■□□□□ 0.36
CCDC25-206ENST00000520202 MAPK8IP3Q9UPT6 1336 aa17.28■□□□□ 0.36
CCDC25-206ENST00000520202 SSH2Q76I76 1423 aa17.27■□□□□ 0.36
CCDC25-206ENST00000520202 RRP1P56182 461 aaKnown RBP17.27■□□□□ 0.36
CCDC25-206ENST00000520202 NEFMP07197 916 aa17.27■□□□□ 0.35
CCDC25-206ENST00000520202 WDR63Q8IWG1 891 aa17.27■□□□□ 0.35
CCDC25-206ENST00000520202 WWC1Q8IX03 1113 aa17.27■□□□□ 0.35
CCDC25-206ENST00000520202 TRMT2AQ8IZ69 625 aaKnown RBP17.27■□□□□ 0.35
CCDC25-206ENST00000520202 NALCNQ8IZF0 1738 aa17.26■□□□□ 0.35
CCDC25-206ENST00000520202 OVOS2A0A0J9YW53 1432 aa17.26■□□□□ 0.35
CCDC25-206ENST00000520202 OVOS2Q6IE36 1432 aa17.26■□□□□ 0.35
CCDC25-206ENST00000520202 PPM1GO15355 546 aaPredicted RBP17.26■□□□□ 0.35
CCDC25-206ENST00000520202 FCHSD2O94868 740 aa17.26■□□□□ 0.35
CCDC25-206ENST00000520202 RGPD8O14715 1765 aaPredicted RBP17.24■□□□□ 0.35
CCDC25-206ENST00000520202 PMFBP1Q8TBY8 1022 aa17.24■□□□□ 0.35
CCDC25-206ENST00000520202 USP31Q70CQ4 1352 aa17.24■□□□□ 0.35
CCDC25-206ENST00000520202 PLEKHF1Q96S99 279 aa17.23■□□□□ 0.35
CCDC25-206ENST00000520202 ZRANB1Q9UGI0 708 aa17.23■□□□□ 0.35
CCDC25-206ENST00000520202 EMILIN1Q9Y6C2 1016 aa17.22■□□□□ 0.35
CCDC25-206ENST00000520202 NEUROD2Q15784 382 aa17.21■□□□□ 0.35
CCDC25-206ENST00000520202 C14orf37Q86TY3 774 aa17.21■□□□□ 0.35
CCDC25-206ENST00000520202 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.21■□□□□ 0.35
CCDC25-206ENST00000520202 LRRC7Q96NW7 1537 aa17.2■□□□□ 0.34
CCDC25-206ENST00000520202 MYH16Q9H6N6 1097 aa17.2■□□□□ 0.34
CCDC25-206ENST00000520202 PHF8Q9UPP1 1060 aa17.2■□□□□ 0.34
CCDC25-206ENST00000520202 RRP7AQ9Y3A4 280 aaKnown RBP17.2■□□□□ 0.34
CCDC25-206ENST00000520202 IL13P35225 146 aa17.19■□□□□ 0.34
CCDC25-206ENST00000520202 TMPOP42166 694 aaKnown RBP17.19■□□□□ 0.34
CCDC25-206ENST00000520202 FBLN1P23142 703 aa17.18■□□□□ 0.34
CCDC25-206ENST00000520202 RRS1Q15050 365 aaKnown RBP17.18■□□□□ 0.34
CCDC25-206ENST00000520202 PROSER2Q86WR7 435 aaPredicted RBP17.18■□□□□ 0.34
CCDC25-206ENST00000520202 USP54Q70EL1 1684 aa17.18■□□□□ 0.34
CCDC25-206ENST00000520202 RSPH6AQ9H0K4 717 aa17.17■□□□□ 0.34
CCDC25-206ENST00000520202 NCOA3Q9Y6Q9 1424 aa17.17■□□□□ 0.34
CCDC25-206ENST00000520202 IL16Q14005 1332 aa17.16■□□□□ 0.34
CCDC25-206ENST00000520202 PIK3C2AO00443 1686 aa17.16■□□□□ 0.34
CCDC25-206ENST00000520202 PRKAR2BP31323 418 aa17.16■□□□□ 0.34
CCDC25-206ENST00000520202 SPINK5Q9NQ38 1064 aaPredicted RBP17.16■□□□□ 0.34
CCDC25-206ENST00000520202 KIF24Q5T7B8 1368 aa17.15■□□□□ 0.34
CCDC25-206ENST00000520202 SBNO1A3KN83 1393 aa17.14■□□□□ 0.33
CCDC25-206ENST00000520202 RIPK4P57078 832 aa17.14■□□□□ 0.33
CCDC25-206ENST00000520202 NLRP6P59044 892 aa17.14■□□□□ 0.33
CCDC25-206ENST00000520202 CALD1Q05682 793 aaKnown RBP17.14■□□□□ 0.33
CCDC25-206ENST00000520202 ESCO1Q5FWF5 840 aa17.14■□□□□ 0.33
CCDC25-206ENST00000520202 FLT4P35916 1363 aa17.13■□□□□ 0.33
CCDC25-206ENST00000520202 CT47B1P0C2W7 299 aaPredicted RBP17.13■□□□□ 0.33
CCDC25-206ENST00000520202 CCDC136Q96JN2 1154 aa17.13■□□□□ 0.33
CCDC25-206ENST00000520202 C19orf44Q9H6X5 657 aa17.13■□□□□ 0.33
CCDC25-206ENST00000520202 DMRT2Q9Y5R5 561 aa17.13■□□□□ 0.33
CCDC25-206ENST00000520202 LMOD3Q0VAK6 560 aa17.13■□□□□ 0.33
CCDC25-206ENST00000520202 ABTB2Q8N961 1025 aa17.13■□□□□ 0.33
CCDC25-206ENST00000520202 DCCP43146 1447 aa17.12■□□□□ 0.33
CCDC25-206ENST00000520202 PSME1Q06323 249 aa17.12■□□□□ 0.33
CCDC25-206ENST00000520202 PAK3O75914 559 aaPredicted RBP17.11■□□□□ 0.33
CCDC25-206ENST00000520202 NFE2L2Q16236 605 aa17.11■□□□□ 0.33
CCDC25-206ENST00000520202 RBM33Q96EV2 1170 aaKnown RBP17.11■□□□□ 0.33
CCDC25-206ENST00000520202 TRIM35Q9UPQ4 493 aa17.11■□□□□ 0.33
CCDC25-206ENST00000520202 KIF1AQ12756 1690 aa17.11■□□□□ 0.33
CCDC25-206ENST00000520202 MAP3K19Q56UN5 1328 aa17.11■□□□□ 0.33
CCDC25-206ENST00000520202 HMOX1P09601 288 aa17.1■□□□□ 0.33
CCDC25-206ENST00000520202 EIF4A2Q14240 407 aaKnown RBP17.1■□□□□ 0.33
CCDC25-206ENST00000520202 B4GALNT3Q6L9W6 998 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms