RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 FAM160A2Q8N612 972 aaPredicted RBP10.99□□□□□ -0.65
CCDC6-203ENST00000518638 HECW2Q9P2P5 1572 aa10.99□□□□□ -0.65
CCDC6-203ENST00000518638 WNT7AO00755 349 aa10.98□□□□□ -0.65
CCDC6-203ENST00000518638 SNIP1Q8TAD8 396 aaKnown RBP10.98□□□□□ -0.65
CCDC6-203ENST00000518638 FAM181BA6NEQ2 426 aa10.97□□□□□ -0.65
CCDC6-203ENST00000518638 RDH13Q8NBN7 331 aa10.97□□□□□ -0.65
CCDC6-203ENST00000518638 ATP6V1AP38606 617 aa10.96□□□□□ -0.65
CCDC6-203ENST00000518638 FUT2Q10981 343 aa10.96□□□□□ -0.65
CCDC6-203ENST00000518638 METTL3Q86U44 580 aaKnown RBP10.96□□□□□ -0.65
CCDC6-203ENST00000518638 PRDM9Q9NQV7 894 aa10.96□□□□□ -0.65
CCDC6-203ENST00000518638 GLI2P10070 1586 aa10.95□□□□□ -0.66
CCDC6-203ENST00000518638 HIC1Q14526 733 aa10.95□□□□□ -0.66
CCDC6-203ENST00000518638 ZC3H15Q8WU90 426 aaKnown RBP10.95□□□□□ -0.66
CCDC6-203ENST00000518638 KIFC2Q96AC6 838 aa10.95□□□□□ -0.66
CCDC6-203ENST00000518638 SALL2Q9Y467 1007 aaPredicted RBP10.95□□□□□ -0.66
CCDC6-203ENST00000518638 KIAA0586Q9BVV6 1533 aa10.94□□□□□ -0.66
CCDC6-203ENST00000518638 PLB1Q6P1J6 1458 aa10.94□□□□□ -0.66
CCDC6-203ENST00000518638 SLC27A5Q9Y2P5 690 aa10.94□□□□□ -0.66
CCDC6-203ENST00000518638 TEX14Q8IWB6 1497 aa10.93□□□□□ -0.66
CCDC6-203ENST00000518638 GNPATO15228 680 aa10.92□□□□□ -0.66
CCDC6-203ENST00000518638 MSS51Q4VC12 460 aa10.92□□□□□ -0.66
CCDC6-203ENST00000518638 ABCC2Q92887 1545 aa10.92□□□□□ -0.66
CCDC6-203ENST00000518638 TRIM32Q13049 653 aa10.91□□□□□ -0.66
CCDC6-203ENST00000518638 DAXXQ9UER7 740 aaPredicted RBP10.91□□□□□ -0.66
CCDC6-203ENST00000518638 PPRC1Q5VV67 1664 aaKnown RBP10.91□□□□□ -0.66
CCDC6-203ENST00000518638 J3QL48 77 aa10.9□□□□□ -0.66
CCDC6-203ENST00000518638 BRICD5Q6PL45 260 aa10.9□□□□□ -0.66
CCDC6-203ENST00000518638 SLC16A10Q8TF71 515 aa10.9□□□□□ -0.66
CCDC6-203ENST00000518638 MRGPRX2Q96LB1 330 aa10.9□□□□□ -0.66
CCDC6-203ENST00000518638 REPIN1Q9BWE0 567 aaKnown RBP10.9□□□□□ -0.66
CCDC6-203ENST00000518638 CUL7Q14999 1698 aa10.89□□□□□ -0.67
CCDC6-203ENST00000518638 DDX11L8A8MPP1 907 aa10.89□□□□□ -0.67
CCDC6-203ENST00000518638 ZMYND10O75800 440 aa10.89□□□□□ -0.67
CCDC6-203ENST00000518638 FBXO41Q8TF61 875 aa10.89□□□□□ -0.67
CCDC6-203ENST00000518638 PTPRGP23470 1445 aa10.89□□□□□ -0.67
CCDC6-203ENST00000518638 CARMIL2Q6F5E8 1435 aa10.89□□□□□ -0.67
CCDC6-203ENST00000518638 ASXL2Q76L83 1435 aa10.89□□□□□ -0.67
CCDC6-203ENST00000518638 LOC100996750A0A140TA64 210 aa10.87□□□□□ -0.67
CCDC6-203ENST00000518638 FECHP22830 423 aa10.87□□□□□ -0.67
CCDC6-203ENST00000518638 HPS1Q92902 700 aa10.87□□□□□ -0.67
CCDC6-203ENST00000518638 KRTAP4-6Q9BYQ5 205 aa10.87□□□□□ -0.67
CCDC6-203ENST00000518638 MAP3K4Q9Y6R4 1608 aa10.87□□□□□ -0.67
CCDC6-203ENST00000518638 UHRF1BP1LA0JNW5 1464 aa10.87□□□□□ -0.67
CCDC6-203ENST00000518638 GCGRP47871 477 aa10.86□□□□□ -0.67
CCDC6-203ENST00000518638 RNF19BQ6ZMZ0 732 aa10.86□□□□□ -0.67
CCDC6-203ENST00000518638 BARGINQ6ZT62 677 aa10.86□□□□□ -0.67
CCDC6-203ENST00000518638 TNIKQ9UKE5 1360 aa10.86□□□□□ -0.67
CCDC6-203ENST00000518638 SULF1Q8IWU6 871 aa10.85□□□□□ -0.67
CCDC6-203ENST00000518638 TPRNQ4KMQ1 711 aa10.84□□□□□ -0.67
CCDC6-203ENST00000518638 ZSCAN1Q8NBB4 408 aa10.84□□□□□ -0.67
CCDC6-203ENST00000518638 MAP2K5Q13163 448 aa10.83□□□□□ -0.68
CCDC6-203ENST00000518638 GRIPAP1Q4V328 841 aa10.83□□□□□ -0.68
CCDC6-203ENST00000518638 NXF1Q9UBU9 619 aaKnown RBP10.83□□□□□ -0.68
CCDC6-203ENST00000518638 EPRSP07814 1512 aaKnown RBP10.83□□□□□ -0.68
CCDC6-203ENST00000518638 MMP16P51512 607 aa10.82□□□□□ -0.68
CCDC6-203ENST00000518638 GMPRP36959 345 aa10.81□□□□□ -0.68
CCDC6-203ENST00000518638 Q3C1V9 767 aa10.81□□□□□ -0.68
CCDC6-203ENST00000518638 IRF7Q92985 503 aa10.81□□□□□ -0.68
CCDC6-203ENST00000518638 UACAQ9BZF9 1416 aa10.81□□□□□ -0.68
CCDC6-203ENST00000518638 MINK1Q8N4C8 1332 aaPredicted RBP10.81□□□□□ -0.68
CCDC6-203ENST00000518638 COL17A1Q9UMD9 1497 aaPredicted RBP10.81□□□□□ -0.68
CCDC6-203ENST00000518638 KDM5BQ9UGL1 1544 aa10.8□□□□□ -0.68
CCDC6-203ENST00000518638 NPAS3Q8IXF0 933 aa10.8□□□□□ -0.68
CCDC6-203ENST00000518638 KIF27Q86VH2 1401 aa10.8□□□□□ -0.68
CCDC6-203ENST00000518638 IQGAP2Q13576 1575 aa10.8□□□□□ -0.68
CCDC6-203ENST00000518638 IRF6O14896 467 aa10.78□□□□□ -0.68
CCDC6-203ENST00000518638 LORP23490 312 aaPredicted RBP10.78□□□□□ -0.68
CCDC6-203ENST00000518638 RC3H1Q5TC82 1133 aaKnown RBP10.78□□□□□ -0.68
CCDC6-203ENST00000518638 KRI1Q8N9T8 703 aaKnown RBP10.78□□□□□ -0.68
CCDC6-203ENST00000518638 NLRP7Q8WX94 980 aa10.78□□□□□ -0.68
CCDC6-203ENST00000518638 WNT7BP56706 349 aa10.77□□□□□ -0.69
CCDC6-203ENST00000518638 IGF1RP08069 1367 aa10.77□□□□□ -0.69
CCDC6-203ENST00000518638 ZCCHC11Q5TAX3 1644 aaKnown RBP10.76□□□□□ -0.69
CCDC6-203ENST00000518638 CFAP43Q8NDM7 1665 aa10.76□□□□□ -0.69
CCDC6-203ENST00000518638 DXOO77932 396 aaKnown RBP10.76□□□□□ -0.69
CCDC6-203ENST00000518638 CCDC102AQ96A19 550 aa10.76□□□□□ -0.69
CCDC6-203ENST00000518638 WDR7Q9Y4E6 1490 aa10.75□□□□□ -0.69
CCDC6-203ENST00000518638 MAGI3Q5TCQ9 1506 aa10.75□□□□□ -0.69
CCDC6-203ENST00000518638 SKOR1P84550 965 aa10.74□□□□□ -0.69
CCDC6-203ENST00000518638 USB1Q9BQ65 265 aaKnown RBP10.74□□□□□ -0.69
CCDC6-203ENST00000518638 SLC24A3Q9HC58 644 aa10.74□□□□□ -0.69
CCDC6-203ENST00000518638 TTBK1Q5TCY1 1321 aaPredicted RBP10.74□□□□□ -0.69
CCDC6-203ENST00000518638 ALDH1A1P00352 501 aa10.73□□□□□ -0.69
CCDC6-203ENST00000518638 LMTK3Q96Q04 1460 aa10.73□□□□□ -0.69
CCDC6-203ENST00000518638 H3BM21 787 aa10.72□□□□□ -0.69
CCDC6-203ENST00000518638 PRKCSHP14314 528 aaPredicted RBP10.72□□□□□ -0.69
CCDC6-203ENST00000518638 CCDC24Q8N4L8 307 aa10.72□□□□□ -0.69
CCDC6-203ENST00000518638 AK7Q96M32 723 aa10.72□□□□□ -0.69
CCDC6-203ENST00000518638 CARMIL1Q5VZK9 1371 aa10.72□□□□□ -0.69
CCDC6-203ENST00000518638 KIF21BO75037 1637 aa10.72□□□□□ -0.69
CCDC6-203ENST00000518638 BMP1P13497 986 aa10.71□□□□□ -0.69
CCDC6-203ENST00000518638 DISP1Q96F81 1524 aa10.71□□□□□ -0.69
CCDC6-203ENST00000518638 UGGT2Q9NYU1 1516 aa10.7□□□□□ -0.7
CCDC6-203ENST00000518638 CD109Q6YHK3 1445 aa10.7□□□□□ -0.7
CCDC6-203ENST00000518638 VEGFBP49765 207 aa10.7□□□□□ -0.7
CCDC6-203ENST00000518638 TRIM46Q7Z4K8 759 aa10.7□□□□□ -0.7
CCDC6-203ENST00000518638 CAPN5O15484 640 aaPredicted RBP10.69□□□□□ -0.7
CCDC6-203ENST00000518638 PHOX2BQ99453 314 aa10.69□□□□□ -0.7
CCDC6-203ENST00000518638 KIAA0556O60303 1618 aa10.69□□□□□ -0.7
CCDC6-203ENST00000518638 PCF11O94913 1555 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms