RNA–Protein interactions for RNA: ENST00000517955.2

ARFGEF1-202, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 1,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-202ENST00000517955 PHF8Q9UPP1 1060 aa15.77■□□□□ 0.12
ARFGEF1-202ENST00000517955 NUTM2FA1L443 756 aa15.76■□□□□ 0.11
ARFGEF1-202ENST00000517955 PER1O15534 1290 aaPredicted RBP15.76■□□□□ 0.11
ARFGEF1-202ENST00000517955 DDX10Q13206 875 aaKnown RBP15.76■□□□□ 0.11
ARFGEF1-202ENST00000517955 ESCO1Q5FWF5 840 aa15.76■□□□□ 0.11
ARFGEF1-202ENST00000517955 PANK3Q9H999 370 aa15.76■□□□□ 0.11
ARFGEF1-202ENST00000517955 AKAP12Q02952 1782 aa15.76■□□□□ 0.11
ARFGEF1-202ENST00000517955 ACEP12821 1306 aa15.75■□□□□ 0.11
ARFGEF1-202ENST00000517955 TOM1O60784 492 aa15.75■□□□□ 0.11
ARFGEF1-202ENST00000517955 HDGFL2Q7Z4V5 671 aaPredicted RBP15.75■□□□□ 0.11
ARFGEF1-202ENST00000517955 ORAI2Q96SN7 254 aa15.75■□□□□ 0.11
ARFGEF1-202ENST00000517955 A0A1W2PP64 1363 aa15.75■□□□□ 0.11
ARFGEF1-202ENST00000517955 BRINP3Q76B58 766 aa15.73■□□□□ 0.11
ARFGEF1-202ENST00000517955 CARD14Q9BXL6 1004 aa15.73■□□□□ 0.11
ARFGEF1-202ENST00000517955 SSH2Q76I76 1423 aa15.73■□□□□ 0.11
ARFGEF1-202ENST00000517955 MON2Q7Z3U7 1717 aa15.73■□□□□ 0.11
ARFGEF1-202ENST00000517955 NGDNQ8NEJ9 315 aaKnown RBP15.72■□□□□ 0.11
ARFGEF1-202ENST00000517955 NPC1L1Q9UHC9 1359 aa15.72■□□□□ 0.11
ARFGEF1-202ENST00000517955 USP6P35125 1406 aa15.71■□□□□ 0.11
ARFGEF1-202ENST00000517955 EDC4Q6P2E9 1401 aaKnown RBP15.71■□□□□ 0.11
ARFGEF1-202ENST00000517955 PMFBP1Q8TBY8 1022 aa15.71■□□□□ 0.11
ARFGEF1-202ENST00000517955 KTN1Q86UP2 1357 aaKnown RBP15.71■□□□□ 0.11
ARFGEF1-202ENST00000517955 NPHP3Q7Z494 1330 aa15.69■□□□□ 0.1
ARFGEF1-202ENST00000517955 KNSTRNQ9Y448 316 aa15.69■□□□□ 0.1
ARFGEF1-202ENST00000517955 TTC21AQ8NDW8 1320 aa15.68■□□□□ 0.1
ARFGEF1-202ENST00000517955 NRKQ7Z2Y5 1582 aa15.68■□□□□ 0.1
ARFGEF1-202ENST00000517955 FOXO3O43524 673 aa15.68■□□□□ 0.1
ARFGEF1-202ENST00000517955 AMER1Q5JTC6 1135 aaPredicted RBP15.68■□□□□ 0.1
ARFGEF1-202ENST00000517955 NHSL1Q5SYE7 1610 aa15.68■□□□□ 0.1
ARFGEF1-202ENST00000517955 NSD3Q9BZ95 1437 aa15.68■□□□□ 0.1
ARFGEF1-202ENST00000517955 NSD2O96028 1365 aa15.67■□□□□ 0.1
ARFGEF1-202ENST00000517955 UBAP1LF5GYI3 381 aa15.67■□□□□ 0.1
ARFGEF1-202ENST00000517955 PSME1Q06323 249 aa15.67■□□□□ 0.1
ARFGEF1-202ENST00000517955 MKRN4PQ13434 485 aaPredicted RBP15.67■□□□□ 0.1
ARFGEF1-202ENST00000517955 SOS2Q07890 1332 aaPredicted RBP15.67■□□□□ 0.1
ARFGEF1-202ENST00000517955 CGNL1Q0VF96 1302 aa15.67■□□□□ 0.1
ARFGEF1-202ENST00000517955 TTC21BQ7Z4L5 1316 aa15.67■□□□□ 0.1
ARFGEF1-202ENST00000517955 ROBO1Q9Y6N7 1651 aa15.67■□□□□ 0.1
ARFGEF1-202ENST00000517955 PXDNQ92626 1479 aa15.66■□□□□ 0.1
ARFGEF1-202ENST00000517955 SBNO1A3KN83 1393 aa15.66■□□□□ 0.1
ARFGEF1-202ENST00000517955 AHDC1Q5TGY3 1603 aaPredicted RBP15.66■□□□□ 0.1
ARFGEF1-202ENST00000517955 TRPM3Q9HCF6 1732 aaPredicted RBP15.65■□□□□ 0.1
ARFGEF1-202ENST00000517955 KRT28Q7Z3Y7 464 aa15.65■□□□□ 0.1
ARFGEF1-202ENST00000517955 FYB1O15117 783 aa15.64■□□□□ 0.09
ARFGEF1-202ENST00000517955 USP31Q70CQ4 1352 aa15.63■□□□□ 0.09
ARFGEF1-202ENST00000517955 DIEXFQ68CQ4 756 aaKnown RBP15.63■□□□□ 0.09
ARFGEF1-202ENST00000517955 USP54Q70EL1 1684 aa15.63■□□□□ 0.09
ARFGEF1-202ENST00000517955 ALS2Q96Q42 1657 aa15.61■□□□□ 0.09
ARFGEF1-202ENST00000517955 SPATA31A3Q5VYP0 1347 aa15.61■□□□□ 0.09
ARFGEF1-202ENST00000517955 KIF20BQ96Q89 1820 aa15.61■□□□□ 0.09
ARFGEF1-202ENST00000517955 ANKRD26Q9UPS8 1709 aa15.6■□□□□ 0.09
ARFGEF1-202ENST00000517955 TNS3Q68CZ2 1445 aa15.6■□□□□ 0.09
ARFGEF1-202ENST00000517955 RALBP1Q15311 655 aa15.59■□□□□ 0.09
ARFGEF1-202ENST00000517955 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.59■□□□□ 0.09
ARFGEF1-202ENST00000517955 DDX17Q92841 729 aaKnown RBP15.59■□□□□ 0.09
ARFGEF1-202ENST00000517955 PIK3C2AO00443 1686 aa15.59■□□□□ 0.09
ARFGEF1-202ENST00000517955 PARD3Q8TEW0 1356 aa15.59■□□□□ 0.09
ARFGEF1-202ENST00000517955 OVOS2A0A0J9YW53 1432 aa15.59■□□□□ 0.09
ARFGEF1-202ENST00000517955 OVOS2Q6IE36 1432 aa15.59■□□□□ 0.09
ARFGEF1-202ENST00000517955 SOCS7O14512 581 aa15.58■□□□□ 0.08
ARFGEF1-202ENST00000517955 ILDR2Q71H61 639 aa15.58■□□□□ 0.08
ARFGEF1-202ENST00000517955 NME9Q86XW9 330 aa15.58■□□□□ 0.08
ARFGEF1-202ENST00000517955 LRRC59Q96AG4 307 aaKnown RBP15.58■□□□□ 0.08
ARFGEF1-202ENST00000517955 AKT1S1Q96B36 256 aa15.58■□□□□ 0.08
ARFGEF1-202ENST00000517955 PRKRIP1Q9H875 184 aaPredicted RBP15.58■□□□□ 0.08
ARFGEF1-202ENST00000517955 ARHGEF10O15013 1369 aa15.58■□□□□ 0.08
ARFGEF1-202ENST00000517955 PIP4K2BP78356 416 aa15.57■□□□□ 0.08
ARFGEF1-202ENST00000517955 ABTB2Q8N961 1025 aa15.57■□□□□ 0.08
ARFGEF1-202ENST00000517955 ANP32CO43423 234 aa15.56■□□□□ 0.08
ARFGEF1-202ENST00000517955 PAK3O75914 559 aaPredicted RBP15.56■□□□□ 0.08
ARFGEF1-202ENST00000517955 XPCQ01831 940 aaPredicted RBP15.56■□□□□ 0.08
ARFGEF1-202ENST00000517955 NLRP13Q86W25 1043 aa15.56■□□□□ 0.08
ARFGEF1-202ENST00000517955 COG3Q96JB2 828 aa15.56■□□□□ 0.08
ARFGEF1-202ENST00000517955 GGNBP2Q9H3C7 697 aa15.56■□□□□ 0.08
ARFGEF1-202ENST00000517955 COL16A1Q07092 1604 aaPredicted RBP15.56■□□□□ 0.08
ARFGEF1-202ENST00000517955 PHLPP1O60346 1717 aa15.55■□□□□ 0.08
ARFGEF1-202ENST00000517955 MARF1Q9Y4F3 1742 aaKnown RBP15.55■□□□□ 0.08
ARFGEF1-202ENST00000517955 MED1Q15648 1581 aaPredicted RBP15.55■□□□□ 0.08
ARFGEF1-202ENST00000517955 USP19O94966 1318 aa15.55■□□□□ 0.08
ARFGEF1-202ENST00000517955 CC2D1BQ5T0F9 858 aaKnown RBP15.55■□□□□ 0.08
ARFGEF1-202ENST00000517955 AATKQ6ZMQ8 1374 aa15.54■□□□□ 0.08
ARFGEF1-202ENST00000517955 SPDYE2BA6NHP3 402 aa15.54■□□□□ 0.08
ARFGEF1-202ENST00000517955 SPDYE6P0CI01 402 aa15.54■□□□□ 0.08
ARFGEF1-202ENST00000517955 NLRP6P59044 892 aa15.54■□□□□ 0.08
ARFGEF1-202ENST00000517955 SPDYE2Q495Y8 402 aa15.54■□□□□ 0.08
ARFGEF1-202ENST00000517955 MORC1Q86VD1 984 aa15.54■□□□□ 0.08
ARFGEF1-202ENST00000517955 SLIT3O75094 1523 aa15.53■□□□□ 0.08
ARFGEF1-202ENST00000517955 ZRANB1Q9UGI0 708 aa15.52■□□□□ 0.08
ARFGEF1-202ENST00000517955 COL22A1Q8NFW1 1626 aaPredicted RBP15.52■□□□□ 0.08
ARFGEF1-202ENST00000517955 KCNH5Q8NCM2 988 aa15.51■□□□□ 0.07
ARFGEF1-202ENST00000517955 CRYBG1Q9Y4K1 1723 aa15.51■□□□□ 0.07
ARFGEF1-202ENST00000517955 MYBBP1AQ9BQG0 1328 aaKnown RBP15.5■□□□□ 0.07
ARFGEF1-202ENST00000517955 PNPLA6Q8IY17 1366 aa15.49■□□□□ 0.07
ARFGEF1-202ENST00000517955 GCP02774 474 aa15.49■□□□□ 0.07
ARFGEF1-202ENST00000517955 KIF24Q5T7B8 1368 aa15.49■□□□□ 0.07
ARFGEF1-202ENST00000517955 NFAT5O94916 1531 aa15.48■□□□□ 0.07
ARFGEF1-202ENST00000517955 SHPRHQ149N8 1683 aa15.48■□□□□ 0.07
ARFGEF1-202ENST00000517955 PPP2R1AP30153 589 aa15.48■□□□□ 0.07
ARFGEF1-202ENST00000517955 LMOD2Q6P5Q4 547 aa15.48■□□□□ 0.07
ARFGEF1-202ENST00000517955 SMG6Q86US8 1419 aaKnown RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms