RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 WIPF1O43516 503 aa8.01□□□□□ -1.13
HERC4-215ENST00000515753 HRCP23327 699 aa8.01□□□□□ -1.13
HERC4-215ENST00000515753 DESI1Q6ICB0 168 aa8.01□□□□□ -1.13
HERC4-215ENST00000515753 CABLES1Q8TDN4 633 aa8.01□□□□□ -1.13
HERC4-215ENST00000515753 VARSP26640 1264 aaKnown RBP8□□□□□ -1.13
HERC4-215ENST00000515753 VEGFBP49765 207 aa8□□□□□ -1.13
HERC4-215ENST00000515753 LYPD8Q6UX82 237 aa8□□□□□ -1.13
HERC4-215ENST00000515753 MAP10Q9P2G4 905 aa8□□□□□ -1.13
HERC4-215ENST00000515753 NNTQ13423 1086 aa7.99□□□□□ -1.13
HERC4-215ENST00000515753 RIC3Q7Z5B4 369 aa7.99□□□□□ -1.13
HERC4-215ENST00000515753 FOXJ1Q92949 421 aa7.99□□□□□ -1.13
HERC4-215ENST00000515753 ZFP42Q96MM3 310 aa7.99□□□□□ -1.13
HERC4-215ENST00000515753 SPTLC1O15269 473 aa7.98□□□□□ -1.13
HERC4-215ENST00000515753 ARID5BQ14865 1188 aa7.98□□□□□ -1.13
HERC4-215ENST00000515753 DIXDC1Q155Q3 683 aa7.98□□□□□ -1.13
HERC4-215ENST00000515753 TSC1Q92574 1164 aa7.98□□□□□ -1.13
HERC4-215ENST00000515753 AK7Q96M32 723 aa7.98□□□□□ -1.13
HERC4-215ENST00000515753 ZBTB3Q9H5J0 574 aa7.98□□□□□ -1.13
HERC4-215ENST00000515753 NXF1Q9UBU9 619 aaKnown RBP7.98□□□□□ -1.13
HERC4-215ENST00000515753 STK17AQ9UEE5 414 aa7.98□□□□□ -1.13
HERC4-215ENST00000515753 PLEKHG3A1L390 1219 aa7.97□□□□□ -1.13
HERC4-215ENST00000515753 PER1O15534 1290 aaPredicted RBP7.97□□□□□ -1.13
HERC4-215ENST00000515753 GJA5P36382 358 aa7.97□□□□□ -1.13
HERC4-215ENST00000515753 INSM1Q01101 510 aaPredicted RBP7.97□□□□□ -1.13
HERC4-215ENST00000515753 WDR4P57081 412 aaKnown RBP7.96□□□□□ -1.14
HERC4-215ENST00000515753 LIMD1Q9UGP4 676 aa7.96□□□□□ -1.14
HERC4-215ENST00000515753 F12P00748 615 aaPredicted RBP7.95□□□□□ -1.14
HERC4-215ENST00000515753 TIMP2P16035 220 aa7.95□□□□□ -1.14
HERC4-215ENST00000515753 QPCTQ16769 361 aa7.95□□□□□ -1.14
HERC4-215ENST00000515753 FAM174AQ8TBP5 190 aa7.95□□□□□ -1.14
HERC4-215ENST00000515753 SLC16A10Q8TF71 515 aa7.95□□□□□ -1.14
HERC4-215ENST00000515753 PURBQ96QR8 312 aaKnown RBP7.95□□□□□ -1.14
HERC4-215ENST00000515753 NUTM2BA6NNL0 878 aaPredicted RBP7.94□□□□□ -1.14
HERC4-215ENST00000515753 SOBPA7XYQ1 873 aa7.94□□□□□ -1.14
HERC4-215ENST00000515753 NUTM2EB1AL46 878 aaPredicted RBP7.94□□□□□ -1.14
HERC4-215ENST00000515753 AGERQ15109 404 aa7.94□□□□□ -1.14
HERC4-215ENST00000515753 C4orf48Q5BLP8 95 aa7.94□□□□□ -1.14
HERC4-215ENST00000515753 NUTM2DQ5VT03 806 aaPredicted RBP7.94□□□□□ -1.14
HERC4-215ENST00000515753 MRPL14Q6P1L8 145 aaKnown RBP7.94□□□□□ -1.14
HERC4-215ENST00000515753 NUTM2AQ8IVF1 878 aaPredicted RBP7.94□□□□□ -1.14
HERC4-215ENST00000515753 MPNDQ8N594 471 aa7.94□□□□□ -1.14
HERC4-215ENST00000515753 ADH1CP00326 375 aa7.93□□□□□ -1.14
HERC4-215ENST00000515753 GMPRP36959 345 aa7.93□□□□□ -1.14
HERC4-215ENST00000515753 PDE4DQ08499 809 aa7.93□□□□□ -1.14
HERC4-215ENST00000515753 PRPF38BQ5VTL8 546 aaKnown RBP7.93□□□□□ -1.14
HERC4-215ENST00000515753 MYSM1Q5VVJ2 828 aa7.93□□□□□ -1.14
HERC4-215ENST00000515753 KLF16Q9BXK1 252 aaPredicted RBP7.92□□□□□ -1.14
HERC4-215ENST00000515753 ZFAND3Q9H8U3 227 aa7.92□□□□□ -1.14
HERC4-215ENST00000515753 SLC24A3Q9HC58 644 aa7.92□□□□□ -1.14
HERC4-215ENST00000515753 ZIC2O95409 532 aaPredicted RBP7.91□□□□□ -1.14
HERC4-215ENST00000515753 NR3C2P08235 984 aa7.91□□□□□ -1.14
HERC4-215ENST00000515753 SCARF1Q14162 830 aa7.91□□□□□ -1.14
HERC4-215ENST00000515753 CDK15Q96Q40 435 aa7.91□□□□□ -1.14
HERC4-215ENST00000515753 ERBB4Q15303 1308 aa7.9□□□□□ -1.14
HERC4-215ENST00000515753 IRF7Q92985 503 aa7.9□□□□□ -1.14
HERC4-215ENST00000515753 ITPKCQ96DU7 683 aa7.9□□□□□ -1.14
HERC4-215ENST00000515753 H3BM21 787 aa7.89□□□□□ -1.15
HERC4-215ENST00000515753 LILRB3O75022 631 aa7.89□□□□□ -1.15
HERC4-215ENST00000515753 GRM5P41594 1212 aa7.89□□□□□ -1.15
HERC4-215ENST00000515753 RTL5Q5HYW3 569 aaPredicted RBP7.89□□□□□ -1.15
HERC4-215ENST00000515753 C6orf118Q5T5N4 469 aa7.89□□□□□ -1.15
HERC4-215ENST00000515753 BPHLQ86WA6 291 aaPredicted RBP7.88□□□□□ -1.15
HERC4-215ENST00000515753 POLR3EQ9NVU0 708 aa7.88□□□□□ -1.15
HERC4-215ENST00000515753 NPAS3Q8IXF0 933 aa7.87□□□□□ -1.15
HERC4-215ENST00000515753 MAGEB6P1A0A0J9YX57 407 aa7.86□□□□□ -1.15
HERC4-215ENST00000515753 LOC100996750A0A140TA64 210 aa7.86□□□□□ -1.15
HERC4-215ENST00000515753 LORP23490 312 aaPredicted RBP7.86□□□□□ -1.15
HERC4-215ENST00000515753 NR5A1Q13285 461 aa7.86□□□□□ -1.15
HERC4-215ENST00000515753 KRTAP4-6Q9BYQ5 205 aa7.86□□□□□ -1.15
HERC4-215ENST00000515753 CLK2P49760 499 aaKnown RBP7.85□□□□□ -1.15
HERC4-215ENST00000515753 ZSCAN1Q8NBB4 408 aa7.85□□□□□ -1.15
HERC4-215ENST00000515753 HELBQ8NG08 1087 aaPredicted RBP7.85□□□□□ -1.15
HERC4-215ENST00000515753 MAN1A2O60476 641 aa7.84□□□□□ -1.15
HERC4-215ENST00000515753 BMP2P12643 396 aa7.84□□□□□ -1.15
HERC4-215ENST00000515753 FSHRP23945 695 aa7.84□□□□□ -1.15
HERC4-215ENST00000515753 TUSC1Q2TAM9 212 aa7.84□□□□□ -1.15
HERC4-215ENST00000515753 SH3RF1Q7Z6J0 888 aa7.84□□□□□ -1.15
HERC4-215ENST00000515753 CARD14Q9BXL6 1004 aa7.84□□□□□ -1.15
HERC4-215ENST00000515753 CTDSPL2Q05D32 466 aa7.83□□□□□ -1.16
HERC4-215ENST00000515753 VASH1Q7L8A9 365 aaPredicted RBP7.83□□□□□ -1.16
HERC4-215ENST00000515753 ARMC2Q8NEN0 867 aa7.83□□□□□ -1.16
HERC4-215ENST00000515753 C1QTNF2Q9BXJ5 285 aa7.83□□□□□ -1.16
HERC4-215ENST00000515753 NBPF14Q5TI25 921 aa7.82□□□□□ -1.16
HERC4-215ENST00000515753 SH3BP5LQ7L8J4 393 aa7.82□□□□□ -1.16
HERC4-215ENST00000515753 LINC00528Q8N1L1 170 aa7.82□□□□□ -1.16
HERC4-215ENST00000515753 UPP2O95045 317 aa7.81□□□□□ -1.16
HERC4-215ENST00000515753 FAM181BA6NEQ2 426 aa7.8□□□□□ -1.16
HERC4-215ENST00000515753 MEIOBQ8N635 442 aa7.8□□□□□ -1.16
HERC4-215ENST00000515753 FBXO31Q5XUX0 539 aaPredicted RBP7.79□□□□□ -1.16
HERC4-215ENST00000515753 LRRN4Q8WUT4 740 aa7.79□□□□□ -1.16
HERC4-215ENST00000515753 RSPH6AQ9H0K4 717 aa7.79□□□□□ -1.16
HERC4-215ENST00000515753 DNMT3LQ9UJW3 386 aa7.79□□□□□ -1.16
HERC4-215ENST00000515753 PPFIA3O75145 1194 aa7.78□□□□□ -1.16
HERC4-215ENST00000515753 ERFEQ4G0M1 354 aa7.78□□□□□ -1.16
HERC4-215ENST00000515753 TRMT44Q8IYL2 757 aaKnown RBP7.78□□□□□ -1.16
HERC4-215ENST00000515753 CCDC116Q8IYX3 515 aa7.78□□□□□ -1.16
HERC4-215ENST00000515753 ATP1B4Q9UN42 357 aaPredicted RBP7.78□□□□□ -1.16
HERC4-215ENST00000515753 MAP4K5Q9Y4K4 846 aa7.78□□□□□ -1.16
HERC4-215ENST00000515753 SOS2Q07890 1332 aaPredicted RBP7.78□□□□□ -1.16
HERC4-215ENST00000515753 CBLBQ13191 982 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms