RNA–Protein interactions for RNA: ENST00000511905.5

SPOCK3-219, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2

Gene SPOCK3, Length 1,700 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-219ENST00000511905 NEUROD2Q15784 382 aa26.62■■□□□ 1.85
SPOCK3-219ENST00000511905 CANXP27824 592 aaKnown RBP26.61■■□□□ 1.85
SPOCK3-219ENST00000511905 CABP1Q9NZU7 370 aa26.6■■□□□ 1.85
SPOCK3-219ENST00000511905 ZMYM3Q14202 1370 aa26.6■■□□□ 1.85
SPOCK3-219ENST00000511905 KIF13AQ9H1H9 1805 aa26.6■■□□□ 1.85
SPOCK3-219ENST00000511905 DIAPH1O60610 1272 aaKnown RBP26.59■■□□□ 1.85
SPOCK3-219ENST00000511905 TMPOP42166 694 aaKnown RBP26.59■■□□□ 1.85
SPOCK3-219ENST00000511905 CPSF1Q10570 1443 aaKnown RBP26.59■■□□□ 1.85
SPOCK3-219ENST00000511905 PMFBP1Q8TBY8 1022 aa26.58■■□□□ 1.85
SPOCK3-219ENST00000511905 EDC4Q6P2E9 1401 aaKnown RBP26.57■■□□□ 1.84
SPOCK3-219ENST00000511905 MAPK8IP3Q9UPT6 1336 aa26.57■■□□□ 1.84
SPOCK3-219ENST00000511905 FCHSD2O94868 740 aa26.56■■□□□ 1.84
SPOCK3-219ENST00000511905 CPS1P31327 1500 aa26.55■■□□□ 1.84
SPOCK3-219ENST00000511905 WASLO00401 505 aaPredicted RBP26.54■■□□□ 1.84
SPOCK3-219ENST00000511905 TRIM35Q9UPQ4 493 aa26.54■■□□□ 1.84
SPOCK3-219ENST00000511905 C8orf34Q49A92 452 aa26.53■■□□□ 1.84
SPOCK3-219ENST00000511905 PANK1Q8TE04 598 aa26.53■■□□□ 1.84
SPOCK3-219ENST00000511905 ESF1Q9H501 851 aaKnown RBP26.53■■□□□ 1.84
SPOCK3-219ENST00000511905 U2SURPO15042 1029 aaKnown RBP26.53■■□□□ 1.84
SPOCK3-219ENST00000511905 COG6Q9Y2V7 657 aa26.53■■□□□ 1.84
SPOCK3-219ENST00000511905 AATKQ6ZMQ8 1374 aa26.52■■□□□ 1.84
SPOCK3-219ENST00000511905 IGHDP01880 384 aa26.51■■□□□ 1.83
SPOCK3-219ENST00000511905 WAPLQ7Z5K2 1190 aa26.51■■□□□ 1.83
SPOCK3-219ENST00000511905 TNRQ92752 1358 aa26.5■■□□□ 1.83
SPOCK3-219ENST00000511905 NPM2Q86SE8 214 aaKnown RBP26.5■■□□□ 1.83
SPOCK3-219ENST00000511905 FRAT1Q92837 279 aaPredicted RBP26.5■■□□□ 1.83
SPOCK3-219ENST00000511905 ZKSCAN2Q63HK3 967 aa26.49■■□□□ 1.83
SPOCK3-219ENST00000511905 METP08581 1390 aa26.49■■□□□ 1.83
SPOCK3-219ENST00000511905 SKAP1Q86WV1 359 aa26.48■■□□□ 1.83
SPOCK3-219ENST00000511905 ZNF428Q96B54 188 aa26.48■■□□□ 1.83
SPOCK3-219ENST00000511905 POLKQ9UBT6 870 aa26.48■■□□□ 1.83
SPOCK3-219ENST00000511905 PPIP5K1Q6PFW1 1433 aa26.47■■□□□ 1.83
SPOCK3-219ENST00000511905 CDK12Q9NYV4 1490 aaPredicted RBP26.46■■□□□ 1.83
SPOCK3-219ENST00000511905 MON2Q7Z3U7 1717 aa26.46■■□□□ 1.83
SPOCK3-219ENST00000511905 TMEM2Q9UHN6 1383 aa26.46■■□□□ 1.83
SPOCK3-219ENST00000511905 VIRMAQ69YN4 1812 aaKnown RBP26.45■■□□□ 1.83
SPOCK3-219ENST00000511905 MLECQ14165 292 aa26.45■■□□□ 1.83
SPOCK3-219ENST00000511905 MVPQ14764 893 aaKnown RBP26.45■■□□□ 1.83
SPOCK3-219ENST00000511905 UBR1Q8IWV7 1749 aa26.45■■□□□ 1.83
SPOCK3-219ENST00000511905 RIPK4P57078 832 aa26.45■■□□□ 1.82
SPOCK3-219ENST00000511905 ZNF692Q9BU19 519 aaPredicted RBP26.45■■□□□ 1.82
SPOCK3-219ENST00000511905 RSPH6AQ9H0K4 717 aa26.44■■□□□ 1.82
SPOCK3-219ENST00000511905 RWDD1Q9H446 243 aaPredicted RBP26.44■■□□□ 1.82
SPOCK3-219ENST00000511905 CCDC61Q9Y6R9 512 aa26.44■■□□□ 1.82
SPOCK3-219ENST00000511905 LRRC7Q96NW7 1537 aa26.44■■□□□ 1.82
SPOCK3-219ENST00000511905 RLBP1P12271 317 aa26.43■■□□□ 1.82
SPOCK3-219ENST00000511905 DZIP1LQ8IYY4 767 aaKnown RBP26.43■■□□□ 1.82
SPOCK3-219ENST00000511905 AKAP12Q02952 1782 aa26.43■■□□□ 1.82
SPOCK3-219ENST00000511905 NEFMP07197 916 aa26.42■■□□□ 1.82
SPOCK3-219ENST00000511905 BRPF1P55201 1214 aaPredicted RBP26.42■■□□□ 1.82
SPOCK3-219ENST00000511905 CALD1Q05682 793 aaKnown RBP26.42■■□□□ 1.82
SPOCK3-219ENST00000511905 EXOSC9Q06265 439 aaKnown RBP26.42■■□□□ 1.82
SPOCK3-219ENST00000511905 ALDH1L2Q3SY69 923 aa26.42■■□□□ 1.82
SPOCK3-219ENST00000511905 PPM1GO15355 546 aaPredicted RBP26.41■■□□□ 1.82
SPOCK3-219ENST00000511905 RGS3P49796 1198 aa26.41■■□□□ 1.82
SPOCK3-219ENST00000511905 NUDT16Q96DE0 195 aaKnown RBP26.41■■□□□ 1.82
SPOCK3-219ENST00000511905 SENP3Q9H4L4 574 aaPredicted RBP26.41■■□□□ 1.82
SPOCK3-219ENST00000511905 USP35Q9P2H5 1018 aa26.41■■□□□ 1.82
SPOCK3-219ENST00000511905 MAP2P11137 1827 aaKnown RBP26.4■■□□□ 1.82
SPOCK3-219ENST00000511905 C3P01024 1663 aa26.39■■□□□ 1.81
SPOCK3-219ENST00000511905 PLEKHG1Q9ULL1 1385 aa26.39■■□□□ 1.81
SPOCK3-219ENST00000511905 PCDHB15Q9Y5E8 787 aa26.39■■□□□ 1.81
SPOCK3-219ENST00000511905 KIF16BQ96L93 1317 aa26.38■■□□□ 1.81
SPOCK3-219ENST00000511905 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.38■■□□□ 1.81
SPOCK3-219ENST00000511905 TSR2Q969E8 191 aaKnown RBP26.37■■□□□ 1.81
SPOCK3-219ENST00000511905 SMC4Q9NTJ3 1288 aa26.37■■□□□ 1.81
SPOCK3-219ENST00000511905 ADAMTS13Q76LX8 1427 aa26.37■■□□□ 1.81
SPOCK3-219ENST00000511905 ITSN1Q15811 1721 aa26.37■■□□□ 1.81
SPOCK3-219ENST00000511905 IPO8O15397 1037 aaKnown RBP26.36■■□□□ 1.81
SPOCK3-219ENST00000511905 IL13P35225 146 aa26.36■■□□□ 1.81
SPOCK3-219ENST00000511905 NFE2L2Q16236 605 aa26.36■■□□□ 1.81
SPOCK3-219ENST00000511905 ATF7IPQ6VMQ6 1270 aa26.36■■□□□ 1.81
SPOCK3-219ENST00000511905 TXNDC2Q86VQ3 553 aa26.36■■□□□ 1.81
SPOCK3-219ENST00000511905 FTSJ3Q8IY81 847 aaKnown RBP26.36■■□□□ 1.81
SPOCK3-219ENST00000511905 DDX19BQ9UMR2 479 aa26.36■■□□□ 1.81
SPOCK3-219ENST00000511905 SSH1Q8WYL5 1049 aa26.35■■□□□ 1.81
SPOCK3-219ENST00000511905 PRKAR2BP31323 418 aa26.34■■□□□ 1.81
SPOCK3-219ENST00000511905 COG3Q96JB2 828 aa26.34■■□□□ 1.81
SPOCK3-219ENST00000511905 BCL2L13Q9BXK5 485 aa26.34■■□□□ 1.81
SPOCK3-219ENST00000511905 HDAC1Q13547 482 aaPredicted RBP26.34■■□□□ 1.81
SPOCK3-219ENST00000511905 RTL5Q5HYW3 569 aaPredicted RBP26.33■■□□□ 1.81
SPOCK3-219ENST00000511905 TNNQ9UQP3 1299 aa26.33■■□□□ 1.81
SPOCK3-219ENST00000511905 TRIM27P14373 513 aa26.32■■□□□ 1.8
SPOCK3-219ENST00000511905 TOPAZ1Q8N9V7 1692 aa26.31■■□□□ 1.8
SPOCK3-219ENST00000511905 LMOD3Q0VAK6 560 aa26.31■■□□□ 1.8
SPOCK3-219ENST00000511905 PLEKHG3A1L390 1219 aa26.3■■□□□ 1.8
SPOCK3-219ENST00000511905 NME9Q86XW9 330 aa26.3■■□□□ 1.8
SPOCK3-219ENST00000511905 IFT57Q9NWB7 429 aa26.3■■□□□ 1.8
SPOCK3-219ENST00000511905 NRKQ7Z2Y5 1582 aa26.3■■□□□ 1.8
SPOCK3-219ENST00000511905 ROBO2Q9HCK4 1378 aa26.28■■□□□ 1.8
SPOCK3-219ENST00000511905 NBR1Q14596 966 aa26.28■■□□□ 1.8
SPOCK3-219ENST00000511905 ARHGAP45Q92619 1136 aa26.28■■□□□ 1.8
SPOCK3-219ENST00000511905 CHMP4BQ9H444 224 aaKnown RBP26.28■■□□□ 1.8
SPOCK3-219ENST00000511905 PDZRN3Q9UPQ7 1066 aa26.28■■□□□ 1.8
SPOCK3-219ENST00000511905 GNAI1P63096 354 aa26.28■■□□□ 1.8
SPOCK3-219ENST00000511905 SLIT1O75093 1534 aa26.27■■□□□ 1.8
SPOCK3-219ENST00000511905 ZNF853P0CG23 659 aa26.27■■□□□ 1.8
SPOCK3-219ENST00000511905 EMILIN1Q9Y6C2 1016 aa26.27■■□□□ 1.8
SPOCK3-219ENST00000511905 DAXXQ9UER7 740 aaPredicted RBP26.26■■□□□ 1.79
SPOCK3-219ENST00000511905 NOB1Q9ULX3 412 aaKnown RBP26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms