RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 FAM9BQ8IZU0 186 aa17.16■□□□□ 0.34
HMGB2-205ENST00000511316 KIF1AQ12756 1690 aa17.16■□□□□ 0.34
HMGB2-205ENST00000511316 POLR3AO14802 1390 aaPredicted RBP17.15■□□□□ 0.34
HMGB2-205ENST00000511316 NUDCQ9Y266 331 aa17.15■□□□□ 0.34
HMGB2-205ENST00000511316 SRPK2P78362 688 aaKnown RBP17.14■□□□□ 0.34
HMGB2-205ENST00000511316 PSME1Q06323 249 aa17.14■□□□□ 0.34
HMGB2-205ENST00000511316 USP47Q96K76 1375 aa17.14■□□□□ 0.33
HMGB2-205ENST00000511316 MSH5O43196 834 aa17.14■□□□□ 0.33
HMGB2-205ENST00000511316 CABP1Q9NZU7 370 aa17.14■□□□□ 0.33
HMGB2-205ENST00000511316 ACEP12821 1306 aa17.14■□□□□ 0.33
HMGB2-205ENST00000511316 EVC2Q86UK5 1308 aa17.14■□□□□ 0.33
HMGB2-205ENST00000511316 SBNO1A3KN83 1393 aa17.13■□□□□ 0.33
HMGB2-205ENST00000511316 TOPAZ1Q8N9V7 1692 aa17.13■□□□□ 0.33
HMGB2-205ENST00000511316 ILDR2Q71H61 639 aa17.12■□□□□ 0.33
HMGB2-205ENST00000511316 C11orf95C9JLR9 678 aaPredicted RBP17.12■□□□□ 0.33
HMGB2-205ENST00000511316 NUTM2BA6NNL0 878 aaPredicted RBP17.11■□□□□ 0.33
HMGB2-205ENST00000511316 NUTM2EB1AL46 878 aaPredicted RBP17.11■□□□□ 0.33
HMGB2-205ENST00000511316 NUTM2AQ8IVF1 878 aaPredicted RBP17.11■□□□□ 0.33
HMGB2-205ENST00000511316 NGDNQ8NEJ9 315 aaKnown RBP17.11■□□□□ 0.33
HMGB2-205ENST00000511316 PPIP5K1Q6PFW1 1433 aa17.1■□□□□ 0.33
HMGB2-205ENST00000511316 COL22A1Q8NFW1 1626 aaPredicted RBP17.1■□□□□ 0.33
HMGB2-205ENST00000511316 TRPM3Q9HCF6 1732 aaPredicted RBP17.1■□□□□ 0.33
HMGB2-205ENST00000511316 INSRP06213 1382 aa17.1■□□□□ 0.33
HMGB2-205ENST00000511316 TNS3Q68CZ2 1445 aa17.09■□□□□ 0.33
HMGB2-205ENST00000511316 BRD4O60885 1362 aaPredicted RBP17.09■□□□□ 0.33
HMGB2-205ENST00000511316 SSH2Q76I76 1423 aa17.08■□□□□ 0.33
HMGB2-205ENST00000511316 RALBP1Q15311 655 aa17.08■□□□□ 0.33
HMGB2-205ENST00000511316 POTEAQ6S8J7 498 aa17.08■□□□□ 0.33
HMGB2-205ENST00000511316 PUS7Q96PZ0 661 aaKnown RBP17.08■□□□□ 0.33
HMGB2-205ENST00000511316 IRX6P78412 446 aaPredicted RBP17.07■□□□□ 0.32
HMGB2-205ENST00000511316 CCDC184Q52MB2 194 aa17.07■□□□□ 0.32
HMGB2-205ENST00000511316 CABLES1Q8TDN4 633 aa17.07■□□□□ 0.32
HMGB2-205ENST00000511316 ITSN1Q15811 1721 aa17.06■□□□□ 0.32
HMGB2-205ENST00000511316 CPSF1Q10570 1443 aaKnown RBP17.06■□□□□ 0.32
HMGB2-205ENST00000511316 ALS2Q96Q42 1657 aa17.05■□□□□ 0.32
HMGB2-205ENST00000511316 SLC12A5Q9H2X9 1139 aa17.05■□□□□ 0.32
HMGB2-205ENST00000511316 CD163L1Q9NR16 1453 aa17.05■□□□□ 0.32
HMGB2-205ENST00000511316 ADAMTS2O95450 1211 aa17.05■□□□□ 0.32
HMGB2-205ENST00000511316 ANP32AP39687 249 aaKnown RBP17.05■□□□□ 0.32
HMGB2-205ENST00000511316 PDE3BQ13370 1112 aa17.04■□□□□ 0.32
HMGB2-205ENST00000511316 NOP58Q9Y2X3 529 aaKnown RBP17.04■□□□□ 0.32
HMGB2-205ENST00000511316 ATAD2Q6PL18 1390 aa17.04■□□□□ 0.32
HMGB2-205ENST00000511316 FNBP4Q8N3X1 1017 aaPredicted RBP17.03■□□□□ 0.32
HMGB2-205ENST00000511316 ARHGEF10O15013 1369 aa17.03■□□□□ 0.32
HMGB2-205ENST00000511316 B4GALNT3Q6L9W6 998 aa17.03■□□□□ 0.32
HMGB2-205ENST00000511316 CCDC136Q96JN2 1154 aa17.03■□□□□ 0.32
HMGB2-205ENST00000511316 USP6P35125 1406 aa17.02■□□□□ 0.32
HMGB2-205ENST00000511316 PAK3O75914 559 aaPredicted RBP17.02■□□□□ 0.31
HMGB2-205ENST00000511316 TMC1Q8TDI8 760 aa17.02■□□□□ 0.31
HMGB2-205ENST00000511316 MYBBP1AQ9BQG0 1328 aaKnown RBP17.02■□□□□ 0.31
HMGB2-205ENST00000511316 LMOD2Q6P5Q4 547 aa17.01■□□□□ 0.31
HMGB2-205ENST00000511316 C8orf37Q96NL8 207 aa17.01■□□□□ 0.31
HMGB2-205ENST00000511316 ZNF692Q9BU19 519 aaPredicted RBP17.01■□□□□ 0.31
HMGB2-205ENST00000511316 PHF23Q9BUL5 403 aaPredicted RBP17.01■□□□□ 0.31
HMGB2-205ENST00000511316 SLC24A1O60721 1099 aa17■□□□□ 0.31
HMGB2-205ENST00000511316 PNISRQ8TF01 805 aaKnown RBP17■□□□□ 0.31
HMGB2-205ENST00000511316 AFF2P51816 1311 aa17■□□□□ 0.31
HMGB2-205ENST00000511316 FAM83GA6ND36 823 aa16.99■□□□□ 0.31
HMGB2-205ENST00000511316 MEX3CQ5U5Q3 659 aaKnown RBP16.99■□□□□ 0.31
HMGB2-205ENST00000511316 NUTM2GQ5VZR2 741 aa16.99■□□□□ 0.31
HMGB2-205ENST00000511316 BCL9LQ86UU0 1499 aa16.99■□□□□ 0.31
HMGB2-205ENST00000511316 TTC21BQ7Z4L5 1316 aa16.98■□□□□ 0.31
HMGB2-205ENST00000511316 TMF1P82094 1093 aa16.98■□□□□ 0.31
HMGB2-205ENST00000511316 NGLY1Q96IV0 654 aa16.98■□□□□ 0.31
HMGB2-205ENST00000511316 CRYBG1Q9Y4K1 1723 aa16.97■□□□□ 0.31
HMGB2-205ENST00000511316 ABTB2Q8N961 1025 aa16.97■□□□□ 0.31
HMGB2-205ENST00000511316 PLEKHG5O94827 1062 aa16.96■□□□□ 0.31
HMGB2-205ENST00000511316 USP19O94966 1318 aa16.96■□□□□ 0.31
HMGB2-205ENST00000511316 SLIT2O94813 1529 aa16.96■□□□□ 0.3
HMGB2-205ENST00000511316 ZNF772Q68DY9 489 aaPredicted RBP16.96■□□□□ 0.3
HMGB2-205ENST00000511316 IPO9Q96P70 1041 aaKnown RBP16.96■□□□□ 0.3
HMGB2-205ENST00000511316 ABCA3Q99758 1704 aa16.95■□□□□ 0.3
HMGB2-205ENST00000511316 A0A1W2PP64 1363 aa16.95■□□□□ 0.3
HMGB2-205ENST00000511316 AKAP12Q02952 1782 aa16.95■□□□□ 0.3
HMGB2-205ENST00000511316 TCERG1O14776 1098 aaKnown RBP16.94■□□□□ 0.3
HMGB2-205ENST00000511316 QTRT2Q9H974 415 aaKnown RBP16.93■□□□□ 0.3
HMGB2-205ENST00000511316 ZRANB1Q9UGI0 708 aa16.93■□□□□ 0.3
HMGB2-205ENST00000511316 MARF1Q9Y4F3 1742 aaKnown RBP16.93■□□□□ 0.3
HMGB2-205ENST00000511316 GCP02774 474 aa16.93■□□□□ 0.3
HMGB2-205ENST00000511316 MS4A1P11836 297 aa16.93■□□□□ 0.3
HMGB2-205ENST00000511316 NLRP13Q86W25 1043 aa16.93■□□□□ 0.3
HMGB2-205ENST00000511316 USP21Q9UK80 565 aa16.93■□□□□ 0.3
HMGB2-205ENST00000511316 NRKQ7Z2Y5 1582 aa16.92■□□□□ 0.3
HMGB2-205ENST00000511316 NLRP6P59044 892 aa16.92■□□□□ 0.3
HMGB2-205ENST00000511316 NINLQ9Y2I6 1382 aa16.91■□□□□ 0.3
HMGB2-205ENST00000511316 PIK3C2AO00443 1686 aa16.91■□□□□ 0.3
HMGB2-205ENST00000511316 TTC21AQ8NDW8 1320 aa16.91■□□□□ 0.3
HMGB2-205ENST00000511316 CARD14Q9BXL6 1004 aa16.91■□□□□ 0.3
HMGB2-205ENST00000511316 MON2Q7Z3U7 1717 aa16.91■□□□□ 0.3
HMGB2-205ENST00000511316 ZC3H6P61129 1189 aaKnown RBP16.9■□□□□ 0.3
HMGB2-205ENST00000511316 TERF2IPQ9NYB0 399 aa16.9■□□□□ 0.3
HMGB2-205ENST00000511316 ATRNO75882 1429 aa16.9■□□□□ 0.3
HMGB2-205ENST00000511316 USP31Q70CQ4 1352 aa16.9■□□□□ 0.3
HMGB2-205ENST00000511316 PARD3Q8TEW0 1356 aa16.9■□□□□ 0.3
HMGB2-205ENST00000511316 KIAA0232Q92628 1395 aa16.9■□□□□ 0.3
HMGB2-205ENST00000511316 RTL5Q5HYW3 569 aaPredicted RBP16.89■□□□□ 0.29
HMGB2-205ENST00000511316 NME9Q86XW9 330 aa16.89■□□□□ 0.29
HMGB2-205ENST00000511316 UNC5CLQ8IV45 518 aa16.89■□□□□ 0.29
HMGB2-205ENST00000511316 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.89■□□□□ 0.29
HMGB2-205ENST00000511316 ZBTB47Q9UFB7 747 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms