RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 PSME1Q06323 249 aa12.26□□□□□ -0.45
SCAMP1-202ENST00000506858 KRT28Q7Z3Y7 464 aa12.26□□□□□ -0.45
SCAMP1-202ENST00000506858 ROBO1Q9Y6N7 1651 aa12.26□□□□□ -0.45
SCAMP1-202ENST00000506858 ATAD2Q6PL18 1390 aa12.25□□□□□ -0.45
SCAMP1-202ENST00000506858 ZNF316A6NFI3 1004 aaPredicted RBP12.25□□□□□ -0.45
SCAMP1-202ENST00000506858 PAK3O75914 559 aaPredicted RBP12.25□□□□□ -0.45
SCAMP1-202ENST00000506858 CNGB1Q14028 1251 aaPredicted RBP12.25□□□□□ -0.45
SCAMP1-202ENST00000506858 CDCA8Q53HL2 280 aa12.25□□□□□ -0.45
SCAMP1-202ENST00000506858 NUTM2GQ5VZR2 741 aa12.25□□□□□ -0.45
SCAMP1-202ENST00000506858 FBXO41Q8TF61 875 aa12.25□□□□□ -0.45
SCAMP1-202ENST00000506858 SLC24A1O60721 1099 aa12.24□□□□□ -0.45
SCAMP1-202ENST00000506858 LMOD2Q6P5Q4 547 aa12.24□□□□□ -0.45
SCAMP1-202ENST00000506858 CARD14Q9BXL6 1004 aa12.24□□□□□ -0.45
SCAMP1-202ENST00000506858 PANK3Q9H999 370 aa12.24□□□□□ -0.45
SCAMP1-202ENST00000506858 DDX10Q13206 875 aaKnown RBP12.23□□□□□ -0.45
SCAMP1-202ENST00000506858 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.23□□□□□ -0.45
SCAMP1-202ENST00000506858 PUS7Q96PZ0 661 aaKnown RBP12.23□□□□□ -0.45
SCAMP1-202ENST00000506858 ZRANB1Q9UGI0 708 aa12.23□□□□□ -0.45
SCAMP1-202ENST00000506858 CD163L1Q9NR16 1453 aa12.22□□□□□ -0.45
SCAMP1-202ENST00000506858 ILDR1Q86SU0 546 aaPredicted RBP12.22□□□□□ -0.45
SCAMP1-202ENST00000506858 NPHP3Q7Z494 1330 aa12.22□□□□□ -0.45
SCAMP1-202ENST00000506858 A0A1W2PP64 1363 aa12.22□□□□□ -0.45
SCAMP1-202ENST00000506858 HDGFL2Q7Z4V5 671 aaPredicted RBP12.21□□□□□ -0.46
SCAMP1-202ENST00000506858 POLR3AO14802 1390 aaPredicted RBP12.21□□□□□ -0.46
SCAMP1-202ENST00000506858 KTN1Q86UP2 1357 aaKnown RBP12.21□□□□□ -0.46
SCAMP1-202ENST00000506858 TOPAZ1Q8N9V7 1692 aa12.21□□□□□ -0.46
SCAMP1-202ENST00000506858 SOS2Q07890 1332 aaPredicted RBP12.2□□□□□ -0.46
SCAMP1-202ENST00000506858 CABLES1Q8TDN4 633 aa12.2□□□□□ -0.46
SCAMP1-202ENST00000506858 TERF2IPQ9NYB0 399 aa12.2□□□□□ -0.46
SCAMP1-202ENST00000506858 TTC21BQ7Z4L5 1316 aa12.19□□□□□ -0.46
SCAMP1-202ENST00000506858 NME9Q86XW9 330 aa12.19□□□□□ -0.46
SCAMP1-202ENST00000506858 PXDNQ92626 1479 aa12.19□□□□□ -0.46
SCAMP1-202ENST00000506858 CPSF1Q10570 1443 aaKnown RBP12.19□□□□□ -0.46
SCAMP1-202ENST00000506858 ZNF692Q9BU19 519 aaPredicted RBP12.19□□□□□ -0.46
SCAMP1-202ENST00000506858 USP6P35125 1406 aa12.18□□□□□ -0.46
SCAMP1-202ENST00000506858 ANKRD36BQ8N2N9 1353 aa12.18□□□□□ -0.46
SCAMP1-202ENST00000506858 MYOM1P52179 1685 aa12.18□□□□□ -0.46
SCAMP1-202ENST00000506858 ABTB2Q8N961 1025 aa12.18□□□□□ -0.46
SCAMP1-202ENST00000506858 SPATA31A3Q5VYP0 1347 aa12.17□□□□□ -0.46
SCAMP1-202ENST00000506858 SOX12O15370 315 aa12.17□□□□□ -0.46
SCAMP1-202ENST00000506858 FBLN1P23142 703 aa12.17□□□□□ -0.46
SCAMP1-202ENST00000506858 GGNBP2Q9H3C7 697 aa12.17□□□□□ -0.46
SCAMP1-202ENST00000506858 ITSN1Q15811 1721 aa12.17□□□□□ -0.46
SCAMP1-202ENST00000506858 NSD3Q9BZ95 1437 aa12.17□□□□□ -0.46
SCAMP1-202ENST00000506858 NUTM2BA6NNL0 878 aaPredicted RBP12.16□□□□□ -0.46
SCAMP1-202ENST00000506858 NUTM2EB1AL46 878 aaPredicted RBP12.16□□□□□ -0.46
SCAMP1-202ENST00000506858 NUTM2AQ8IVF1 878 aaPredicted RBP12.16□□□□□ -0.46
SCAMP1-202ENST00000506858 LRRC59Q96AG4 307 aaKnown RBP12.16□□□□□ -0.46
SCAMP1-202ENST00000506858 PHLPP1O60346 1717 aa12.16□□□□□ -0.46
SCAMP1-202ENST00000506858 KIF1AQ12756 1690 aa12.16□□□□□ -0.46
SCAMP1-202ENST00000506858 SSH2Q76I76 1423 aa12.16□□□□□ -0.46
SCAMP1-202ENST00000506858 NHSL1Q5SYE7 1610 aa12.16□□□□□ -0.46
SCAMP1-202ENST00000506858 NLRP6P59044 892 aa12.15□□□□□ -0.46
SCAMP1-202ENST00000506858 AKT1S1Q96B36 256 aa12.15□□□□□ -0.46
SCAMP1-202ENST00000506858 AHDC1Q5TGY3 1603 aaPredicted RBP12.15□□□□□ -0.46
SCAMP1-202ENST00000506858 FYB1O15117 783 aa12.15□□□□□ -0.47
SCAMP1-202ENST00000506858 PER1O15534 1290 aaPredicted RBP12.15□□□□□ -0.47
SCAMP1-202ENST00000506858 NINLQ9Y2I6 1382 aa12.14□□□□□ -0.47
SCAMP1-202ENST00000506858 COL16A1Q07092 1604 aaPredicted RBP12.14□□□□□ -0.47
SCAMP1-202ENST00000506858 CC2D1BQ5T0F9 858 aaKnown RBP12.14□□□□□ -0.47
SCAMP1-202ENST00000506858 SBNO1A3KN83 1393 aa12.14□□□□□ -0.47
SCAMP1-202ENST00000506858 TNS3Q68CZ2 1445 aa12.13□□□□□ -0.47
SCAMP1-202ENST00000506858 TNNT2P45379 298 aaPredicted RBP12.13□□□□□ -0.47
SCAMP1-202ENST00000506858 KNSTRNQ9Y448 316 aa12.13□□□□□ -0.47
SCAMP1-202ENST00000506858 AKAP12Q02952 1782 aa12.13□□□□□ -0.47
SCAMP1-202ENST00000506858 PNPLA6Q8IY17 1366 aa12.13□□□□□ -0.47
SCAMP1-202ENST00000506858 EDC4Q6P2E9 1401 aaKnown RBP12.12□□□□□ -0.47
SCAMP1-202ENST00000506858 ZBTB7CA1YPR0 619 aa12.12□□□□□ -0.47
SCAMP1-202ENST00000506858 ADAMTS2O95450 1211 aa12.12□□□□□ -0.47
SCAMP1-202ENST00000506858 TRPM3Q9HCF6 1732 aaPredicted RBP12.12□□□□□ -0.47
SCAMP1-202ENST00000506858 AMER1Q5JTC6 1135 aaPredicted RBP12.11□□□□□ -0.47
SCAMP1-202ENST00000506858 ZC3H6P61129 1189 aaKnown RBP12.11□□□□□ -0.47
SCAMP1-202ENST00000506858 MON2Q7Z3U7 1717 aa12.1□□□□□ -0.47
SCAMP1-202ENST00000506858 TTC21AQ8NDW8 1320 aa12.1□□□□□ -0.47
SCAMP1-202ENST00000506858 JCADQ9P266 1359 aa12.1□□□□□ -0.47
SCAMP1-202ENST00000506858 SPDYE2BA6NHP3 402 aa12.09□□□□□ -0.47
SCAMP1-202ENST00000506858 SPDYE6P0CI01 402 aa12.09□□□□□ -0.47
SCAMP1-202ENST00000506858 HAP1P54257 671 aaPredicted RBP12.09□□□□□ -0.47
SCAMP1-202ENST00000506858 SPDYE2Q495Y8 402 aa12.09□□□□□ -0.47
SCAMP1-202ENST00000506858 NLRP13Q86W25 1043 aa12.09□□□□□ -0.47
SCAMP1-202ENST00000506858 PIK3C2AO00443 1686 aa12.09□□□□□ -0.47
SCAMP1-202ENST00000506858 CGNL1Q0VF96 1302 aa12.09□□□□□ -0.47
SCAMP1-202ENST00000506858 GCP02774 474 aa12.08□□□□□ -0.48
SCAMP1-202ENST00000506858 CHRNA2Q15822 529 aa12.08□□□□□ -0.48
SCAMP1-202ENST00000506858 COG3Q96JB2 828 aa12.08□□□□□ -0.48
SCAMP1-202ENST00000506858 NRKQ7Z2Y5 1582 aa12.08□□□□□ -0.48
SCAMP1-202ENST00000506858 ARHGEF10O15013 1369 aa12.08□□□□□ -0.48
SCAMP1-202ENST00000506858 ALS2Q96Q42 1657 aa12.08□□□□□ -0.48
SCAMP1-202ENST00000506858 MED1Q15648 1581 aaPredicted RBP12.07□□□□□ -0.48
SCAMP1-202ENST00000506858 RRS1Q15050 365 aaKnown RBP12.07□□□□□ -0.48
SCAMP1-202ENST00000506858 MORC1Q86VD1 984 aa12.07□□□□□ -0.48
SCAMP1-202ENST00000506858 CHRDL2Q6WN34 429 aa12.06□□□□□ -0.48
SCAMP1-202ENST00000506858 USP19O94966 1318 aa12.06□□□□□ -0.48
SCAMP1-202ENST00000506858 BRD4O60885 1362 aaPredicted RBP12.06□□□□□ -0.48
SCAMP1-202ENST00000506858 USP31Q70CQ4 1352 aa12.06□□□□□ -0.48
SCAMP1-202ENST00000506858 LRP6O75581 1613 aa12.05□□□□□ -0.48
SCAMP1-202ENST00000506858 FAM83GA6ND36 823 aa12.05□□□□□ -0.48
SCAMP1-202ENST00000506858 OVOS2A0A0J9YW53 1432 aa12.05□□□□□ -0.48
SCAMP1-202ENST00000506858 OVOS2Q6IE36 1432 aa12.05□□□□□ -0.48
SCAMP1-202ENST00000506858 C8orf37Q96NL8 207 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms