RNA–Protein interactions for RNA: ENST00000506827.1

ITGA3-209, Transcript of integrin subunit alpha 3, humanhuman

TSL 3

Gene ITGA3, Length 827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-209ENST00000506827 FBXO41Q8TF61 875 aa20.23■□□□□ 0.83
ITGA3-209ENST00000506827 DDX17Q92841 729 aaKnown RBP20.23■□□□□ 0.83
ITGA3-209ENST00000506827 NSD3Q9BZ95 1437 aa20.23■□□□□ 0.83
ITGA3-209ENST00000506827 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.22■□□□□ 0.83
ITGA3-209ENST00000506827 ABTB2Q8N961 1025 aa20.22■□□□□ 0.83
ITGA3-209ENST00000506827 AHDC1Q5TGY3 1603 aaPredicted RBP20.22■□□□□ 0.83
ITGA3-209ENST00000506827 PXDNQ92626 1479 aa20.22■□□□□ 0.83
ITGA3-209ENST00000506827 SPATA31A3Q5VYP0 1347 aa20.22■□□□□ 0.83
ITGA3-209ENST00000506827 ARHGEF10O15013 1369 aa20.21■□□□□ 0.83
ITGA3-209ENST00000506827 NSD2O96028 1365 aa20.21■□□□□ 0.83
ITGA3-209ENST00000506827 NPC1L1Q9UHC9 1359 aa20.21■□□□□ 0.83
ITGA3-209ENST00000506827 FYB1O15117 783 aa20.19■□□□□ 0.82
ITGA3-209ENST00000506827 NLRP13Q86W25 1043 aa20.19■□□□□ 0.82
ITGA3-209ENST00000506827 TNS3Q68CZ2 1445 aa20.19■□□□□ 0.82
ITGA3-209ENST00000506827 NHSL1Q5SYE7 1610 aa20.18■□□□□ 0.82
ITGA3-209ENST00000506827 AMER1Q5JTC6 1135 aaPredicted RBP20.18■□□□□ 0.82
ITGA3-209ENST00000506827 LMOD2Q6P5Q4 547 aa20.18■□□□□ 0.82
ITGA3-209ENST00000506827 AKAP12Q02952 1782 aa20.17■□□□□ 0.82
ITGA3-209ENST00000506827 NLRP6P59044 892 aa20.17■□□□□ 0.82
ITGA3-209ENST00000506827 COG3Q96JB2 828 aa20.17■□□□□ 0.82
ITGA3-209ENST00000506827 USP31Q70CQ4 1352 aa20.17■□□□□ 0.82
ITGA3-209ENST00000506827 NME9Q86XW9 330 aa20.16■□□□□ 0.82
ITGA3-209ENST00000506827 MON2Q7Z3U7 1717 aa20.15■□□□□ 0.82
ITGA3-209ENST00000506827 HSPA1LP34931 641 aa20.13■□□□□ 0.81
ITGA3-209ENST00000506827 KCNH5Q8NCM2 988 aa20.13■□□□□ 0.81
ITGA3-209ENST00000506827 GGNBP2Q9H3C7 697 aa20.13■□□□□ 0.81
ITGA3-209ENST00000506827 MORC1Q86VD1 984 aa20.12■□□□□ 0.81
ITGA3-209ENST00000506827 JCADQ9P266 1359 aa20.11■□□□□ 0.81
ITGA3-209ENST00000506827 CC2D1BQ5T0F9 858 aaKnown RBP20.11■□□□□ 0.81
ITGA3-209ENST00000506827 NRKQ7Z2Y5 1582 aa20.11■□□□□ 0.81
ITGA3-209ENST00000506827 RALBP1Q15311 655 aa20.1■□□□□ 0.81
ITGA3-209ENST00000506827 PHLPP1O60346 1717 aa20.1■□□□□ 0.81
ITGA3-209ENST00000506827 TRPM3Q9HCF6 1732 aaPredicted RBP20.1■□□□□ 0.81
ITGA3-209ENST00000506827 USP19O94966 1318 aa20.09■□□□□ 0.81
ITGA3-209ENST00000506827 NUTM2GQ5VZR2 741 aa20.09■□□□□ 0.81
ITGA3-209ENST00000506827 COL16A1Q07092 1604 aaPredicted RBP20.09■□□□□ 0.81
ITGA3-209ENST00000506827 PNPLA6Q8IY17 1366 aa20.08■□□□□ 0.81
ITGA3-209ENST00000506827 ANP32CO43423 234 aa20.08■□□□□ 0.81
ITGA3-209ENST00000506827 DIEXFQ68CQ4 756 aaKnown RBP20.08■□□□□ 0.81
ITGA3-209ENST00000506827 OVOS2A0A0J9YW53 1432 aa20.08■□□□□ 0.8
ITGA3-209ENST00000506827 OVOS2Q6IE36 1432 aa20.08■□□□□ 0.8
ITGA3-209ENST00000506827 HAP1P54257 671 aaPredicted RBP20.07■□□□□ 0.8
ITGA3-209ENST00000506827 ZRANB1Q9UGI0 708 aa20.07■□□□□ 0.8
ITGA3-209ENST00000506827 SPATA31A6Q5VVP1 1343 aa20.06■□□□□ 0.8
ITGA3-209ENST00000506827 GCP02774 474 aa20.06■□□□□ 0.8
ITGA3-209ENST00000506827 ALS2Q96Q42 1657 aa20.04■□□□□ 0.8
ITGA3-209ENST00000506827 AATKQ6ZMQ8 1374 aa20.04■□□□□ 0.8
ITGA3-209ENST00000506827 PRKRIP1Q9H875 184 aaPredicted RBP20.03■□□□□ 0.8
ITGA3-209ENST00000506827 MED1Q15648 1581 aaPredicted RBP20.03■□□□□ 0.8
ITGA3-209ENST00000506827 PIK3C2AO00443 1686 aa20.03■□□□□ 0.8
ITGA3-209ENST00000506827 CNGB1Q14028 1251 aaPredicted RBP20.02■□□□□ 0.8
ITGA3-209ENST00000506827 CABLES1Q8TDN4 633 aa20.02■□□□□ 0.8
ITGA3-209ENST00000506827 PARD3Q8TEW0 1356 aa20.02■□□□□ 0.8
ITGA3-209ENST00000506827 SLIT3O75094 1523 aa20■□□□□ 0.79
ITGA3-209ENST00000506827 KIF24Q5T7B8 1368 aa19.99■□□□□ 0.79
ITGA3-209ENST00000506827 PLEKHG5O94827 1062 aa19.99■□□□□ 0.79
ITGA3-209ENST00000506827 TNNT2P45379 298 aaPredicted RBP19.99■□□□□ 0.79
ITGA3-209ENST00000506827 USP54Q70EL1 1684 aa19.99■□□□□ 0.79
ITGA3-209ENST00000506827 COL22A1Q8NFW1 1626 aaPredicted RBP19.98■□□□□ 0.79
ITGA3-209ENST00000506827 CPDO75976 1380 aa19.98■□□□□ 0.79
ITGA3-209ENST00000506827 KIF20BQ96Q89 1820 aa19.98■□□□□ 0.79
ITGA3-209ENST00000506827 SOX12O15370 315 aa19.98■□□□□ 0.79
ITGA3-209ENST00000506827 ARHGEF25Q86VW2 580 aa19.98■□□□□ 0.79
ITGA3-209ENST00000506827 PPP2R1AP30153 589 aa19.97■□□□□ 0.79
ITGA3-209ENST00000506827 MYBBP1AQ9BQG0 1328 aaKnown RBP19.97■□□□□ 0.79
ITGA3-209ENST00000506827 ZC3H6P61129 1189 aaKnown RBP19.96■□□□□ 0.79
ITGA3-209ENST00000506827 POLKQ9UBT6 870 aa19.96■□□□□ 0.79
ITGA3-209ENST00000506827 SHPRHQ149N8 1683 aa19.96■□□□□ 0.79
ITGA3-209ENST00000506827 NUTM2BA6NNL0 878 aaPredicted RBP19.95■□□□□ 0.78
ITGA3-209ENST00000506827 NUTM2EB1AL46 878 aaPredicted RBP19.95■□□□□ 0.78
ITGA3-209ENST00000506827 AMPHP49418 695 aa19.95■□□□□ 0.78
ITGA3-209ENST00000506827 NUTM2AQ8IVF1 878 aaPredicted RBP19.95■□□□□ 0.78
ITGA3-209ENST00000506827 PRDM11Q9NQV5 511 aa19.95■□□□□ 0.78
ITGA3-209ENST00000506827 RRS1Q15050 365 aaKnown RBP19.94■□□□□ 0.78
ITGA3-209ENST00000506827 MAP3K19Q56UN5 1328 aa19.94■□□□□ 0.78
ITGA3-209ENST00000506827 ANKRD26Q9UPS8 1709 aa19.93■□□□□ 0.78
ITGA3-209ENST00000506827 MTHFSP49914 203 aa19.93■□□□□ 0.78
ITGA3-209ENST00000506827 IP6K1Q92551 441 aa19.93■□□□□ 0.78
ITGA3-209ENST00000506827 CFAP53Q96M91 514 aa19.93■□□□□ 0.78
ITGA3-209ENST00000506827 RTL1A6NKG5 1358 aa19.93■□□□□ 0.78
ITGA3-209ENST00000506827 KIAA0232Q92628 1395 aa19.93■□□□□ 0.78
ITGA3-209ENST00000506827 NFAT5O94916 1531 aa19.92■□□□□ 0.78
ITGA3-209ENST00000506827 PPM1GO15355 546 aaPredicted RBP19.92■□□□□ 0.78
ITGA3-209ENST00000506827 ADAMTS2O95450 1211 aa19.91■□□□□ 0.78
ITGA3-209ENST00000506827 FBLN1P23142 703 aa19.91■□□□□ 0.78
ITGA3-209ENST00000506827 EMILIN1Q9Y6C2 1016 aa19.91■□□□□ 0.78
ITGA3-209ENST00000506827 FLT4P35916 1363 aa19.91■□□□□ 0.78
ITGA3-209ENST00000506827 ZBTB7CA1YPR0 619 aa19.9■□□□□ 0.78
ITGA3-209ENST00000506827 SMG6Q86US8 1419 aaKnown RBP19.9■□□□□ 0.78
ITGA3-209ENST00000506827 FAM83GA6ND36 823 aa19.89■□□□□ 0.77
ITGA3-209ENST00000506827 HOXC9P31274 260 aa19.89■□□□□ 0.77
ITGA3-209ENST00000506827 MEX3CQ5U5Q3 659 aaKnown RBP19.89■□□□□ 0.77
ITGA3-209ENST00000506827 PHRF1Q9P1Y6 1649 aaKnown RBP19.88■□□□□ 0.77
ITGA3-209ENST00000506827 INSRP06213 1382 aa19.88■□□□□ 0.77
ITGA3-209ENST00000506827 MARF1Q9Y4F3 1742 aaKnown RBP19.88■□□□□ 0.77
ITGA3-209ENST00000506827 ABCC6O95255 1503 aa19.87■□□□□ 0.77
ITGA3-209ENST00000506827 BLMP54132 1417 aaPredicted RBP19.87■□□□□ 0.77
ITGA3-209ENST00000506827 ILDR1Q86SU0 546 aaPredicted RBP19.87■□□□□ 0.77
ITGA3-209ENST00000506827 NGLY1Q96IV0 654 aa19.87■□□□□ 0.77
ITGA3-209ENST00000506827 CRYBG1Q9Y4K1 1723 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms