RNA–Protein interactions for RNA: ENST00000505612.1

ITGA3-206, Transcript of integrin subunit alpha 3, humanhuman

TSL 4

Gene ITGA3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-206ENST00000505612 TNS3Q68CZ2 1445 aa18.47■□□□□ 0.55
ITGA3-206ENST00000505612 ADAMTS2O95450 1211 aa18.46■□□□□ 0.55
ITGA3-206ENST00000505612 PPIP5K1Q6PFW1 1433 aa18.46■□□□□ 0.55
ITGA3-206ENST00000505612 TMF1P82094 1093 aa18.45■□□□□ 0.54
ITGA3-206ENST00000505612 USP32Q8NFA0 1604 aa18.43■□□□□ 0.54
ITGA3-206ENST00000505612 C8orf37Q96NL8 207 aa18.43■□□□□ 0.54
ITGA3-206ENST00000505612 QRICH2Q9H0J4 1663 aa18.42■□□□□ 0.54
ITGA3-206ENST00000505612 CENPBP07199 599 aaPredicted RBP18.42■□□□□ 0.54
ITGA3-206ENST00000505612 TERF2IPQ9NYB0 399 aa18.42■□□□□ 0.54
ITGA3-206ENST00000505612 FNBP4Q8N3X1 1017 aaPredicted RBP18.41■□□□□ 0.54
ITGA3-206ENST00000505612 ABTB2Q8N961 1025 aa18.41■□□□□ 0.54
ITGA3-206ENST00000505612 RGS17Q9UGC6 210 aaPredicted RBP18.41■□□□□ 0.54
ITGA3-206ENST00000505612 HDGFL2Q7Z4V5 671 aaPredicted RBP18.4■□□□□ 0.54
ITGA3-206ENST00000505612 NLRP13Q86W25 1043 aa18.4■□□□□ 0.54
ITGA3-206ENST00000505612 TMC1Q8TDI8 760 aa18.4■□□□□ 0.54
ITGA3-206ENST00000505612 LRP6O75581 1613 aa18.4■□□□□ 0.54
ITGA3-206ENST00000505612 AFF2P51816 1311 aa18.4■□□□□ 0.54
ITGA3-206ENST00000505612 NINLQ9Y2I6 1382 aa18.4■□□□□ 0.54
ITGA3-206ENST00000505612 ITSN1Q15811 1721 aa18.39■□□□□ 0.53
ITGA3-206ENST00000505612 KTN1Q86UP2 1357 aaKnown RBP18.39■□□□□ 0.53
ITGA3-206ENST00000505612 USP21Q9UK80 565 aa18.37■□□□□ 0.53
ITGA3-206ENST00000505612 COL22A1Q8NFW1 1626 aaPredicted RBP18.37■□□□□ 0.53
ITGA3-206ENST00000505612 RGPD8O14715 1765 aaPredicted RBP18.37■□□□□ 0.53
ITGA3-206ENST00000505612 RXRBP28702 533 aa18.36■□□□□ 0.53
ITGA3-206ENST00000505612 TTC21AQ8NDW8 1320 aa18.36■□□□□ 0.53
ITGA3-206ENST00000505612 CABLES1Q8TDN4 633 aa18.36■□□□□ 0.53
ITGA3-206ENST00000505612 PRKRIP1Q9H875 184 aaPredicted RBP18.36■□□□□ 0.53
ITGA3-206ENST00000505612 QTRT2Q9H974 415 aaKnown RBP18.36■□□□□ 0.53
ITGA3-206ENST00000505612 USP6P35125 1406 aa18.35■□□□□ 0.53
ITGA3-206ENST00000505612 POTEAQ6S8J7 498 aa18.35■□□□□ 0.53
ITGA3-206ENST00000505612 TRPC5Q9UL62 973 aaPredicted RBP18.35■□□□□ 0.53
ITGA3-206ENST00000505612 ILDR2Q71H61 639 aa18.34■□□□□ 0.53
ITGA3-206ENST00000505612 SLC12A5Q9H2X9 1139 aa18.34■□□□□ 0.53
ITGA3-206ENST00000505612 TTC21BQ7Z4L5 1316 aa18.33■□□□□ 0.53
ITGA3-206ENST00000505612 PLEKHG5O94827 1062 aa18.33■□□□□ 0.52
ITGA3-206ENST00000505612 NLRP6P59044 892 aa18.33■□□□□ 0.52
ITGA3-206ENST00000505612 CPSF1Q10570 1443 aaKnown RBP18.32■□□□□ 0.52
ITGA3-206ENST00000505612 RBM6P78332 1123 aaKnown RBP18.32■□□□□ 0.52
ITGA3-206ENST00000505612 UNC5CLQ8IV45 518 aa18.32■□□□□ 0.52
ITGA3-206ENST00000505612 KCNH5Q8NCM2 988 aa18.31■□□□□ 0.52
ITGA3-206ENST00000505612 TOPAZ1Q8N9V7 1692 aa18.31■□□□□ 0.52
ITGA3-206ENST00000505612 NUTM2GQ5VZR2 741 aa18.3■□□□□ 0.52
ITGA3-206ENST00000505612 PRDM11Q9NQV5 511 aa18.3■□□□□ 0.52
ITGA3-206ENST00000505612 SSH2Q76I76 1423 aa18.3■□□□□ 0.52
ITGA3-206ENST00000505612 FAM83GA6ND36 823 aa18.29■□□□□ 0.52
ITGA3-206ENST00000505612 GCP02774 474 aa18.29■□□□□ 0.52
ITGA3-206ENST00000505612 USP19O94966 1318 aa18.28■□□□□ 0.52
ITGA3-206ENST00000505612 SOCS7O14512 581 aa18.28■□□□□ 0.52
ITGA3-206ENST00000505612 PER1O15534 1290 aaPredicted RBP18.28■□□□□ 0.52
ITGA3-206ENST00000505612 RALBP1Q15311 655 aa18.28■□□□□ 0.52
ITGA3-206ENST00000505612 POLR3GLQ9BT43 218 aa18.28■□□□□ 0.52
ITGA3-206ENST00000505612 TRPM3Q9HCF6 1732 aaPredicted RBP18.27■□□□□ 0.52
ITGA3-206ENST00000505612 EDC4Q6P2E9 1401 aaKnown RBP18.25■□□□□ 0.51
ITGA3-206ENST00000505612 ZC3H6P61129 1189 aaKnown RBP18.25■□□□□ 0.51
ITGA3-206ENST00000505612 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.25■□□□□ 0.51
ITGA3-206ENST00000505612 BTG4Q9NY30 223 aa18.25■□□□□ 0.51
ITGA3-206ENST00000505612 ALS2Q96Q42 1657 aa18.25■□□□□ 0.51
ITGA3-206ENST00000505612 SLIT2O94813 1529 aa18.24■□□□□ 0.51
ITGA3-206ENST00000505612 VPS72Q15906 364 aa18.24■□□□□ 0.51
ITGA3-206ENST00000505612 GJD4Q96KN9 370 aaPredicted RBP18.24■□□□□ 0.51
ITGA3-206ENST00000505612 CPDO75976 1380 aa18.24■□□□□ 0.51
ITGA3-206ENST00000505612 ANKRD36BQ8N2N9 1353 aa18.24■□□□□ 0.51
ITGA3-206ENST00000505612 BCL9LQ86UU0 1499 aa18.24■□□□□ 0.51
ITGA3-206ENST00000505612 A0A1W2PP64 1363 aa18.23■□□□□ 0.51
ITGA3-206ENST00000505612 KIAA0232Q92628 1395 aa18.23■□□□□ 0.51
ITGA3-206ENST00000505612 NPC1L1Q9UHC9 1359 aa18.23■□□□□ 0.51
ITGA3-206ENST00000505612 EVA1CP58658 441 aa18.23■□□□□ 0.51
ITGA3-206ENST00000505612 CDK12Q9NYV4 1490 aaPredicted RBP18.22■□□□□ 0.51
ITGA3-206ENST00000505612 USP31Q70CQ4 1352 aa18.22■□□□□ 0.51
ITGA3-206ENST00000505612 YTHDC1Q96MU7 727 aaKnown RBP18.22■□□□□ 0.51
ITGA3-206ENST00000505612 PANK3Q9H999 370 aa18.22■□□□□ 0.51
ITGA3-206ENST00000505612 CCDC9Q9Y3X0 531 aaKnown RBP18.22■□□□□ 0.51
ITGA3-206ENST00000505612 ATRNO75882 1429 aa18.22■□□□□ 0.51
ITGA3-206ENST00000505612 MYOM1P52179 1685 aa18.22■□□□□ 0.51
ITGA3-206ENST00000505612 PARD3Q8TEW0 1356 aa18.2■□□□□ 0.5
ITGA3-206ENST00000505612 COG3Q96JB2 828 aa18.2■□□□□ 0.5
ITGA3-206ENST00000505612 CD163L1Q9NR16 1453 aa18.2■□□□□ 0.5
ITGA3-206ENST00000505612 CHRNA2Q15822 529 aa18.18■□□□□ 0.5
ITGA3-206ENST00000505612 NME9Q86XW9 330 aa18.18■□□□□ 0.5
ITGA3-206ENST00000505612 MYBBP1AQ9BQG0 1328 aaKnown RBP18.18■□□□□ 0.5
ITGA3-206ENST00000505612 AATKQ6ZMQ8 1374 aa18.17■□□□□ 0.5
ITGA3-206ENST00000505612 ARHGEF25Q86VW2 580 aa18.17■□□□□ 0.5
ITGA3-206ENST00000505612 ONECUT3O60422 494 aaPredicted RBP18.16■□□□□ 0.5
ITGA3-206ENST00000505612 MRS2Q9HD23 443 aa18.15■□□□□ 0.5
ITGA3-206ENST00000505612 ZBTB7CA1YPR0 619 aa18.14■□□□□ 0.49
ITGA3-206ENST00000505612 FYB1O15117 783 aa18.14■□□□□ 0.49
ITGA3-206ENST00000505612 STRN4Q9NRL3 753 aa18.14■□□□□ 0.49
ITGA3-206ENST00000505612 KNSTRNQ9Y448 316 aa18.14■□□□□ 0.49
ITGA3-206ENST00000505612 COL14A1Q05707 1796 aaKnown RBP18.14■□□□□ 0.49
ITGA3-206ENST00000505612 MARF1Q9Y4F3 1742 aaKnown RBP18.13■□□□□ 0.49
ITGA3-206ENST00000505612 SOX12O15370 315 aa18.13■□□□□ 0.49
ITGA3-206ENST00000505612 CGNL1Q0VF96 1302 aa18.13■□□□□ 0.49
ITGA3-206ENST00000505612 SPATA31A5Q5VU36 1347 aa18.13■□□□□ 0.49
ITGA3-206ENST00000505612 SPATA31A7Q8IWB4 1347 aa18.13■□□□□ 0.49
ITGA3-206ENST00000505612 SLIT3O75094 1523 aa18.13■□□□□ 0.49
ITGA3-206ENST00000505612 AKAP12Q02952 1782 aa18.12■□□□□ 0.49
ITGA3-206ENST00000505612 ZRANB1Q9UGI0 708 aa18.12■□□□□ 0.49
ITGA3-206ENST00000505612 THRAP3Q9Y2W1 955 aaKnown RBP18.12■□□□□ 0.49
ITGA3-206ENST00000505612 AMER1Q5JTC6 1135 aaPredicted RBP18.11■□□□□ 0.49
ITGA3-206ENST00000505612 CARD14Q9BXL6 1004 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms