RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 ARHGEF28Q8N1W1 1705 aaKnown RBP15.04■□□□□ -0
UBE3D-206ENST00000505226 COL3A1P02461 1466 aaPredicted RBP15.03■□□□□ -0
UBE3D-206ENST00000505226 A0A1W2PP64 1363 aa15.03■□□□□ -0
UBE3D-206ENST00000505226 FRMPD1Q5SYB0 1578 aa15.03■□□□□ -0
UBE3D-206ENST00000505226 CT47B1P0C2W7 299 aaPredicted RBP15.03■□□□□ -0
UBE3D-206ENST00000505226 CHMP5Q9NZZ3 219 aa15.03■□□□□ -0
UBE3D-206ENST00000505226 NSD2O96028 1365 aa15.02■□□□□ -0
UBE3D-206ENST00000505226 RSPH6AQ9H0K4 717 aa15.02■□□□□ -0
UBE3D-206ENST00000505226 DDX19BQ9UMR2 479 aa15.02■□□□□ -0
UBE3D-206ENST00000505226 GOLGA6L3A6NEY3 463 aa15.02□□□□□ -0.01
UBE3D-206ENST00000505226 TRAK2O60296 914 aa15.02□□□□□ -0.01
UBE3D-206ENST00000505226 ASXL2Q76L83 1435 aa15.01□□□□□ -0.01
UBE3D-206ENST00000505226 DDIT3P35638 169 aa15.01□□□□□ -0.01
UBE3D-206ENST00000505226 PUS7Q96PZ0 661 aaKnown RBP15.01□□□□□ -0.01
UBE3D-206ENST00000505226 ABCC11Q96J66 1382 aa15.01□□□□□ -0.01
UBE3D-206ENST00000505226 SIGLEC1Q9BZZ2 1709 aa15.01□□□□□ -0.01
UBE3D-206ENST00000505226 CAMSAP1Q5T5Y3 1602 aa15□□□□□ -0.01
UBE3D-206ENST00000505226 RPGRIP1LQ68CZ1 1315 aa15□□□□□ -0.01
UBE3D-206ENST00000505226 FYB1O15117 783 aa15□□□□□ -0.01
UBE3D-206ENST00000505226 RIPK4P57078 832 aa15□□□□□ -0.01
UBE3D-206ENST00000505226 LNPKQ9C0E8 428 aa14.99□□□□□ -0.01
UBE3D-206ENST00000505226 STK26Q9P289 416 aa14.99□□□□□ -0.01
UBE3D-206ENST00000505226 NUCB1Q02818 461 aa14.99□□□□□ -0.01
UBE3D-206ENST00000505226 NCOA3Q9Y6Q9 1424 aa14.99□□□□□ -0.01
UBE3D-206ENST00000505226 RBM25P49756 843 aaKnown RBP14.98□□□□□ -0.01
UBE3D-206ENST00000505226 NEXMIFQ5QGS0 1516 aa14.98□□□□□ -0.01
UBE3D-206ENST00000505226 KIF2CQ99661 725 aa14.97□□□□□ -0.01
UBE3D-206ENST00000505226 ABCC3O15438 1527 aa14.97□□□□□ -0.01
UBE3D-206ENST00000505226 FBLN1P23142 703 aa14.97□□□□□ -0.01
UBE3D-206ENST00000505226 CD163L1Q9NR16 1453 aa14.97□□□□□ -0.01
UBE3D-206ENST00000505226 SRPK2P78362 688 aaKnown RBP14.97□□□□□ -0.01
UBE3D-206ENST00000505226 HSCBQ8IWL3 235 aa14.97□□□□□ -0.01
UBE3D-206ENST00000505226 IL16Q14005 1332 aa14.96□□□□□ -0.01
UBE3D-206ENST00000505226 CD2BP2O95400 341 aaKnown RBP14.96□□□□□ -0.01
UBE3D-206ENST00000505226 HECW2Q9P2P5 1572 aa14.96□□□□□ -0.01
UBE3D-206ENST00000505226 VGFO15240 615 aaPredicted RBP14.96□□□□□ -0.02
UBE3D-206ENST00000505226 CHD1LQ86WJ1 897 aa14.95□□□□□ -0.02
UBE3D-206ENST00000505226 TNPO1Q92973 898 aaKnown RBP14.94□□□□□ -0.02
UBE3D-206ENST00000505226 IDI1Q13907 227 aa14.94□□□□□ -0.02
UBE3D-206ENST00000505226 C1orf115Q9H7X2 142 aa14.94□□□□□ -0.02
UBE3D-206ENST00000505226 MINK1Q8N4C8 1332 aaPredicted RBP14.94□□□□□ -0.02
UBE3D-206ENST00000505226 SNX21Q969T3 373 aa14.93□□□□□ -0.02
UBE3D-206ENST00000505226 PIK3C2BO00750 1634 aa14.93□□□□□ -0.02
UBE3D-206ENST00000505226 PPIP5K1Q6PFW1 1433 aa14.93□□□□□ -0.02
UBE3D-206ENST00000505226 POGZQ7Z3K3 1410 aa14.93□□□□□ -0.02
UBE3D-206ENST00000505226 PNPLA6Q8IY17 1366 aa14.93□□□□□ -0.02
UBE3D-206ENST00000505226 DIAPH1O60610 1272 aaKnown RBP14.93□□□□□ -0.02
UBE3D-206ENST00000505226 GAS2L3Q86XJ1 694 aa14.93□□□□□ -0.02
UBE3D-206ENST00000505226 UBE2Q2Q8WVN8 375 aa14.93□□□□□ -0.02
UBE3D-206ENST00000505226 KIF16BQ96L93 1317 aa14.92□□□□□ -0.02
UBE3D-206ENST00000505226 ZBTB7BO15156 539 aaPredicted RBP14.92□□□□□ -0.02
UBE3D-206ENST00000505226 THUMPD2Q9BTF0 503 aaKnown RBP14.92□□□□□ -0.02
UBE3D-206ENST00000505226 RBM42Q9BTD8 480 aaKnown RBP14.92□□□□□ -0.02
UBE3D-206ENST00000505226 MLH3Q9UHC1 1453 aa14.91□□□□□ -0.02
UBE3D-206ENST00000505226 IPO8O15397 1037 aaKnown RBP14.91□□□□□ -0.02
UBE3D-206ENST00000505226 SIRT2Q8IXJ6 389 aa14.91□□□□□ -0.02
UBE3D-206ENST00000505226 TSPYL6Q8N831 410 aa14.91□□□□□ -0.02
UBE3D-206ENST00000505226 GRPEL1Q9HAV7 217 aa14.91□□□□□ -0.02
UBE3D-206ENST00000505226 MRE11P49959 708 aa14.91□□□□□ -0.02
UBE3D-206ENST00000505226 ALDH1L2Q3SY69 923 aa14.91□□□□□ -0.02
UBE3D-206ENST00000505226 PHACTR3Q96KR7 559 aa14.91□□□□□ -0.02
UBE3D-206ENST00000505226 PRAM1Q96QH2 718 aa14.91□□□□□ -0.02
UBE3D-206ENST00000505226 FOXD4L1Q9NU39 408 aa14.91□□□□□ -0.02
UBE3D-206ENST00000505226 PTPRMP28827 1452 aa14.91□□□□□ -0.02
UBE3D-206ENST00000505226 BMP2KLQ5H9B9 411 aa14.91□□□□□ -0.02
UBE3D-206ENST00000505226 ANKRD45Q5TZF3 282 aa14.91□□□□□ -0.02
UBE3D-206ENST00000505226 DDX11L8A8MPP1 907 aa14.9□□□□□ -0.02
UBE3D-206ENST00000505226 CLCN1P35523 988 aa14.9□□□□□ -0.02
UBE3D-206ENST00000505226 ERBB4Q15303 1308 aa14.9□□□□□ -0.02
UBE3D-206ENST00000505226 MED14O60244 1454 aa14.9□□□□□ -0.02
UBE3D-206ENST00000505226 LRRC7Q96NW7 1537 aa14.89□□□□□ -0.03
UBE3D-206ENST00000505226 PRKAR2BP31323 418 aa14.89□□□□□ -0.03
UBE3D-206ENST00000505226 RAB3GAP1Q15042 981 aa14.89□□□□□ -0.03
UBE3D-206ENST00000505226 ANKRD26Q9UPS8 1709 aa14.89□□□□□ -0.03
UBE3D-206ENST00000505226 VAMP4O75379 141 aa14.89□□□□□ -0.03
UBE3D-206ENST00000505226 RAPGEF3O95398 923 aa14.89□□□□□ -0.03
UBE3D-206ENST00000505226 CFAP74Q9C0B2 1584 aa14.88□□□□□ -0.03
UBE3D-206ENST00000505226 TBC1D9Q6ZT07 1266 aa14.88□□□□□ -0.03
UBE3D-206ENST00000505226 TERF2IPQ9NYB0 399 aa14.88□□□□□ -0.03
UBE3D-206ENST00000505226 MRPL50Q8N5N7 158 aaKnown RBP14.88□□□□□ -0.03
UBE3D-206ENST00000505226 CABP1Q9NZU7 370 aa14.88□□□□□ -0.03
UBE3D-206ENST00000505226 ELL2O00472 640 aaPredicted RBP14.88□□□□□ -0.03
UBE3D-206ENST00000505226 FCHSD2O94868 740 aa14.88□□□□□ -0.03
UBE3D-206ENST00000505226 MYO5BQ9ULV0 1848 aa14.87□□□□□ -0.03
UBE3D-206ENST00000505226 HSP90AB1P08238 724 aaKnown RBP14.87□□□□□ -0.03
UBE3D-206ENST00000505226 BRPF1P55201 1214 aaPredicted RBP14.87□□□□□ -0.03
UBE3D-206ENST00000505226 HMOX1P09601 288 aa14.87□□□□□ -0.03
UBE3D-206ENST00000505226 POLKQ9UBT6 870 aa14.87□□□□□ -0.03
UBE3D-206ENST00000505226 FAM135BQ49AJ0 1406 aa14.86□□□□□ -0.03
UBE3D-206ENST00000505226 ATAD2Q6PL18 1390 aa14.86□□□□□ -0.03
UBE3D-206ENST00000505226 CDK19Q9BWU1 502 aa14.86□□□□□ -0.03
UBE3D-206ENST00000505226 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.86□□□□□ -0.03
UBE3D-206ENST00000505226 GAS2L2Q8NHY3 880 aa14.85□□□□□ -0.03
UBE3D-206ENST00000505226 PNNQ9H307 717 aaKnown RBP14.85□□□□□ -0.03
UBE3D-206ENST00000505226 ZFYVE9O95405 1425 aa14.85□□□□□ -0.03
UBE3D-206ENST00000505226 CIZ1Q9ULV3 898 aaPredicted RBP14.85□□□□□ -0.03
UBE3D-206ENST00000505226 PIK3R4Q99570 1358 aa14.84□□□□□ -0.03
UBE3D-206ENST00000505226 GCC1Q96CN9 775 aa14.84□□□□□ -0.03
UBE3D-206ENST00000505226 YTHDC2Q9H6S0 1430 aaKnown RBP14.84□□□□□ -0.03
UBE3D-206ENST00000505226 SSFA2P28290 1259 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms