RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH11X-208	ENST00000504220	JARID2	Q92833	1246 aa	Predicted RBP	4.65	□□□□□ -1.66
PCDH11X-208	ENST00000504220	GCC2	Q8IWJ2	1684 aa		4.65	□□□□□ -1.66
PCDH11X-208	ENST00000504220	DUOX2	Q9NRD8	1548 aa		4.65	□□□□□ -1.66
PCDH11X-208	ENST00000504220	BRPF1	P55201	1214 aa	Predicted RBP	4.65	□□□□□ -1.67
PCDH11X-208	ENST00000504220	NBPF10	Q6P3W6	841 aa	Known RBP	4.65	□□□□□ -1.67
PCDH11X-208	ENST00000504220	CEP152	O94986	1710 aa		4.65	□□□□□ -1.67
PCDH11X-208	ENST00000504220	PTMA	P06454	111 aa	Known RBP	4.65	□□□□□ -1.67
PCDH11X-208	ENST00000504220	CADPS2	Q86UW7	1296 aa		4.65	□□□□□ -1.67
PCDH11X-208	ENST00000504220	SPATA31D1	Q6ZQQ2	1576 aa		4.64	□□□□□ -1.67
PCDH11X-208	ENST00000504220	ZNF500	O60304	480 aa	Predicted RBP	4.64	□□□□□ -1.67
PCDH11X-208	ENST00000504220	ANKRD23	Q86SG2	305 aa		4.64	□□□□□ -1.67
PCDH11X-208	ENST00000504220	MKL1	Q969V6	931 aa		4.64	□□□□□ -1.67
PCDH11X-208	ENST00000504220	GZF1	Q9H116	711 aa	Predicted RBP	4.64	□□□□□ -1.67
PCDH11X-208	ENST00000504220	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	4.64	□□□□□ -1.67
PCDH11X-208	ENST00000504220	AFAP1	Q8N556	730 aa		4.64	□□□□□ -1.67
PCDH11X-208	ENST00000504220	PPP4R2	Q9NY27	417 aa		4.64	□□□□□ -1.67
PCDH11X-208	ENST00000504220	SETD1B	Q9UPS6	1966 aa	Known RBP	4.64	□□□□□ -1.67
PCDH11X-208	ENST00000504220	PATL2	C9JE40	543 aa	Known RBP	4.64	□□□□□ -1.67
PCDH11X-208	ENST00000504220	ERBIN	Q96RT1	1412 aa		4.64	□□□□□ -1.67
PCDH11X-208	ENST00000504220	CEP120	Q8N960	986 aa		4.63	□□□□□ -1.67
PCDH11X-208	ENST00000504220	GAS2L2	Q8NHY3	880 aa		4.63	□□□□□ -1.67
PCDH11X-208	ENST00000504220	GTPBP4	Q9BZE4	634 aa	Known RBP	4.63	□□□□□ -1.67
PCDH11X-208	ENST00000504220	FGD6	Q6ZV73	1430 aa		4.63	□□□□□ -1.67
PCDH11X-208	ENST00000504220	OTUD6B	Q8N6M0	293 aa		4.63	□□□□□ -1.67
PCDH11X-208	ENST00000504220	ABCC3	O15438	1527 aa		4.63	□□□□□ -1.67
PCDH11X-208	ENST00000504220	ANKRD33B	A6NCL7	494 aa		4.63	□□□□□ -1.67
PCDH11X-208	ENST00000504220	LETM1	O95202	739 aa	Predicted RBP	4.63	□□□□□ -1.67
PCDH11X-208	ENST00000504220	BECN1	Q14457	450 aa		4.63	□□□□□ -1.67
PCDH11X-208	ENST00000504220	CC2D1B	Q5T0F9	858 aa	Known RBP	4.63	□□□□□ -1.67
PCDH11X-208	ENST00000504220	AXDND1	Q5T1B0	1012 aa	Predicted RBP	4.63	□□□□□ -1.67
PCDH11X-208	ENST00000504220	C1orf115	Q9H7X2	142 aa		4.63	□□□□□ -1.67
PCDH11X-208	ENST00000504220	PIK3C2B	O00750	1634 aa		4.63	□□□□□ -1.67
PCDH11X-208	ENST00000504220	IQGAP3	Q86VI3	1631 aa		4.63	□□□□□ -1.67
PCDH11X-208	ENST00000504220	RALBP1	Q15311	655 aa		4.62	□□□□□ -1.67
PCDH11X-208	ENST00000504220	DNAJC21	Q5F1R6	531 aa	Known RBP	4.62	□□□□□ -1.67
PCDH11X-208	ENST00000504220	SLK	Q9H2G2	1235 aa	Predicted RBP	4.62	□□□□□ -1.67
PCDH11X-208	ENST00000504220	PZP	P20742	1482 aa		4.62	□□□□□ -1.67
PCDH11X-208	ENST00000504220	DHX57	Q6P158	1386 aa	Known RBP	4.62	□□□□□ -1.67
PCDH11X-208	ENST00000504220	DAPK1	P53355	1430 aa		4.62	□□□□□ -1.67
PCDH11X-208	ENST00000504220	UBR1	Q8IWV7	1749 aa		4.62	□□□□□ -1.67
PCDH11X-208	ENST00000504220	CCDC94	Q9BW85	323 aa	Predicted RBP	4.62	□□□□□ -1.67
PCDH11X-208	ENST00000504220	ANTXR1	Q9H6X2	564 aa		4.62	□□□□□ -1.67
PCDH11X-208	ENST00000504220	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	4.62	□□□□□ -1.67
PCDH11X-208	ENST00000504220	DHX29	Q7Z478	1369 aa	Known RBP	4.62	□□□□□ -1.67
PCDH11X-208	ENST00000504220	TET3	O43151	1660 aa		4.62	□□□□□ -1.67
PCDH11X-208	ENST00000504220	ABCC5	O15440	1437 aa		4.62	□□□□□ -1.67
PCDH11X-208	ENST00000504220	PTPRK	Q15262	1439 aa		4.62	□□□□□ -1.67
PCDH11X-208	ENST00000504220	PLA2R1	Q13018	1463 aa		4.62	□□□□□ -1.67
PCDH11X-208	ENST00000504220	ANAPC15	P60006	121 aa		4.62	□□□□□ -1.67
PCDH11X-208	ENST00000504220	BACH2	Q9BYV9	841 aa		4.62	□□□□□ -1.67
PCDH11X-208	ENST00000504220	PNN	Q9H307	717 aa	Known RBP	4.62	□□□□□ -1.67
PCDH11X-208	ENST00000504220	COQ9	O75208	318 aa		4.62	□□□□□ -1.67
PCDH11X-208	ENST00000504220	CT47B1	P0C2W7	299 aa	Predicted RBP	4.62	□□□□□ -1.67
PCDH11X-208	ENST00000504220	NME8	Q8N427	588 aa		4.62	□□□□□ -1.67
PCDH11X-208	ENST00000504220	NEURL4	Q96JN8	1562 aa		4.61	□□□□□ -1.67
PCDH11X-208	ENST00000504220	KIF3B	O15066	747 aa		4.61	□□□□□ -1.67
PCDH11X-208	ENST00000504220	OFD1	O75665	1012 aa		4.61	□□□□□ -1.67
PCDH11X-208	ENST00000504220	ATG3	Q9NT62	314 aa		4.61	□□□□□ -1.67
PCDH11X-208	ENST00000504220	KIF16B	Q96L93	1317 aa		4.61	□□□□□ -1.67
PCDH11X-208	ENST00000504220	ARHGAP31	Q2M1Z3	1444 aa		4.61	□□□□□ -1.67
PCDH11X-208	ENST00000504220	SLC4A3	P48751	1232 aa		4.61	□□□□□ -1.67
PCDH11X-208	ENST00000504220	MTA1	Q13330	715 aa		4.61	□□□□□ -1.67
PCDH11X-208	ENST00000504220	USP19	O94966	1318 aa		4.61	□□□□□ -1.67
PCDH11X-208	ENST00000504220	EFCAB6	Q5THR3	1501 aa		4.61	□□□□□ -1.67
PCDH11X-208	ENST00000504220	TTC36	A6NLP5	189 aa		4.61	□□□□□ -1.67
PCDH11X-208	ENST00000504220	SLFN14	P0C7P3	912 aa		4.61	□□□□□ -1.67
PCDH11X-208	ENST00000504220	TSHZ1	Q6ZSZ6	1077 aa		4.61	□□□□□ -1.67
PCDH11X-208	ENST00000504220	KIAA1211	Q6ZU35	1233 aa		4.61	□□□□□ -1.67
PCDH11X-208	ENST00000504220	SPAG9	O60271	1321 aa	Known RBP	4.6	□□□□□ -1.67
PCDH11X-208	ENST00000504220	CARD11	Q9BXL7	1154 aa		4.6	□□□□□ -1.67
PCDH11X-208	ENST00000504220	RAI14	Q9P0K7	980 aa		4.6	□□□□□ -1.67
PCDH11X-208	ENST00000504220	SKIL	P12757	684 aa		4.6	□□□□□ -1.67
PCDH11X-208	ENST00000504220	CCT2	P78371	535 aa	Known RBP	4.6	□□□□□ -1.67
PCDH11X-208	ENST00000504220	SET	Q01105	290 aa	Predicted RBP	4.6	□□□□□ -1.67
PCDH11X-208	ENST00000504220	MYH16	Q9H6N6	1097 aa		4.6	□□□□□ -1.67
PCDH11X-208	ENST00000504220	FAM53C	Q9NYF3	392 aa		4.6	□□□□□ -1.67
PCDH11X-208	ENST00000504220	IQSEC2	Q5JU85	1478 aa		4.6	□□□□□ -1.67
PCDH11X-208	ENST00000504220	RRBP1	Q9P2E9	1410 aa	Known RBP	4.6	□□□□□ -1.67
PCDH11X-208	ENST00000504220	GOLGA6L22	H0YM25	854 aa		4.6	□□□□□ -1.67
PCDH11X-208	ENST00000504220	APBB1	O00213	710 aa		4.6	□□□□□ -1.67
PCDH11X-208	ENST00000504220	TCERG1	O14776	1098 aa	Known RBP	4.6	□□□□□ -1.67
PCDH11X-208	ENST00000504220	NBPF9	Q3BBW0	867 aa		4.6	□□□□□ -1.67
PCDH11X-208	ENST00000504220	UGGT1	Q9NYU2	1555 aa		4.6	□□□□□ -1.67
PCDH11X-208	ENST00000504220	ROCK1	Q13464	1354 aa		4.59	□□□□□ -1.67
PCDH11X-208	ENST00000504220	ESPN	B1AK53	854 aa		4.59	□□□□□ -1.67
PCDH11X-208	ENST00000504220	MAP2K1	Q02750	393 aa	Predicted RBP	4.59	□□□□□ -1.67
PCDH11X-208	ENST00000504220	CCDC27	Q2M243	656 aa		4.59	□□□□□ -1.67
PCDH11X-208	ENST00000504220	EVI5L	Q96CN4	794 aa		4.59	□□□□□ -1.67
PCDH11X-208	ENST00000504220	SYNM	O15061	1565 aa		4.59	□□□□□ -1.67
PCDH11X-208	ENST00000504220		E9PCH4	1651 aa		4.59	□□□□□ -1.67
PCDH11X-208	ENST00000504220	OS9	Q13438	667 aa	Predicted RBP	4.59	□□□□□ -1.67
PCDH11X-208	ENST00000504220	FEZ2	Q9UHY8	353 aa	Predicted RBP	4.59	□□□□□ -1.67
PCDH11X-208	ENST00000504220	PTPRT	O14522	1441 aa		4.59	□□□□□ -1.67
PCDH11X-208	ENST00000504220	NCOA1	Q15788	1441 aa		4.59	□□□□□ -1.67
PCDH11X-208	ENST00000504220	A2ML1	A8K2U0	1454 aa		4.59	□□□□□ -1.68
PCDH11X-208	ENST00000504220	LTBP4	Q8N2S1	1624 aa		4.59	□□□□□ -1.68
PCDH11X-208	ENST00000504220	RPRD2	Q5VT52	1461 aa	Known RBP	4.58	□□□□□ -1.68
PCDH11X-208	ENST00000504220	GSC	P56915	257 aa	Predicted RBP	4.58	□□□□□ -1.68
PCDH11X-208	ENST00000504220	MAMSTR	Q6ZN01	415 aa		4.58	□□□□□ -1.68
PCDH11X-208	ENST00000504220	AEBP1	Q8IUX7	1158 aa		4.58	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms