RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 CT47B1P0C2W7 299 aaPredicted RBP19.92■□□□□ 0.78
PCDHA1-203ENST00000504120 MRE11P49959 708 aa19.91■□□□□ 0.78
PCDHA1-203ENST00000504120 WWC1Q8IX03 1113 aa19.91■□□□□ 0.78
PCDHA1-203ENST00000504120 NAIPQ13075 1403 aa19.91■□□□□ 0.78
PCDHA1-203ENST00000504120 HIP1O00291 1037 aa19.91■□□□□ 0.78
PCDHA1-203ENST00000504120 ABTB2Q8N961 1025 aa19.91■□□□□ 0.78
PCDHA1-203ENST00000504120 NBPF8Q3BBV2 869 aa19.89■□□□□ 0.78
PCDHA1-203ENST00000504120 FAM43AQ8N2R8 423 aa19.89■□□□□ 0.78
PCDHA1-203ENST00000504120 RABEP1Q15276 862 aa19.89■□□□□ 0.77
PCDHA1-203ENST00000504120 ERC1Q8IUD2 1116 aa19.89■□□□□ 0.77
PCDHA1-203ENST00000504120 RBM33Q96EV2 1170 aaKnown RBP19.89■□□□□ 0.77
PCDHA1-203ENST00000504120 NAT10Q9H0A0 1025 aaKnown RBP19.89■□□□□ 0.77
PCDHA1-203ENST00000504120 WDR63Q8IWG1 891 aa19.89■□□□□ 0.77
PCDHA1-203ENST00000504120 GNAI2P04899 355 aa19.88■□□□□ 0.77
PCDHA1-203ENST00000504120 ZNF692Q9BU19 519 aaPredicted RBP19.88■□□□□ 0.77
PCDHA1-203ENST00000504120 BRMS1Q9HCU9 246 aa19.88■□□□□ 0.77
PCDHA1-203ENST00000504120 TXNDC2Q86VQ3 553 aa19.88■□□□□ 0.77
PCDHA1-203ENST00000504120 LETM1O95202 739 aaPredicted RBP19.87■□□□□ 0.77
PCDHA1-203ENST00000504120 XBP1P17861 261 aa19.87■□□□□ 0.77
PCDHA1-203ENST00000504120 PNISRQ8TF01 805 aaKnown RBP19.87■□□□□ 0.77
PCDHA1-203ENST00000504120 SLC12A5Q9H2X9 1139 aa19.87■□□□□ 0.77
PCDHA1-203ENST00000504120 NOB1Q9ULX3 412 aaKnown RBP19.87■□□□□ 0.77
PCDHA1-203ENST00000504120 MBD3O95983 291 aa19.87■□□□□ 0.77
PCDHA1-203ENST00000504120 FOSBP53539 338 aa19.87■□□□□ 0.77
PCDHA1-203ENST00000504120 PRM3Q9NNZ6 103 aa19.87■□□□□ 0.77
PCDHA1-203ENST00000504120 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.87■□□□□ 0.77
PCDHA1-203ENST00000504120 SMG6Q86US8 1419 aaKnown RBP19.86■□□□□ 0.77
PCDHA1-203ENST00000504120 SLC52A1Q9NWF4 448 aa19.86■□□□□ 0.77
PCDHA1-203ENST00000504120 PDCP20941 246 aa19.86■□□□□ 0.77
PCDHA1-203ENST00000504120 NASPP49321 788 aaPredicted RBP19.86■□□□□ 0.77
PCDHA1-203ENST00000504120 FBXW7Q969H0 707 aa19.86■□□□□ 0.77
PCDHA1-203ENST00000504120 TBC1D2BQ9UPU7 963 aa19.86■□□□□ 0.77
PCDHA1-203ENST00000504120 CCDC141Q6ZP82 1450 aa19.85■□□□□ 0.77
PCDHA1-203ENST00000504120 NEK4P51957 841 aa19.85■□□□□ 0.77
PCDHA1-203ENST00000504120 DNAJC5BQ9UF47 199 aa19.85■□□□□ 0.77
PCDHA1-203ENST00000504120 CCDC39Q9UFE4 941 aa19.85■□□□□ 0.77
PCDHA1-203ENST00000504120 ERBINQ96RT1 1412 aa19.85■□□□□ 0.77
PCDHA1-203ENST00000504120 OLFM4Q6UX06 510 aa19.85■□□□□ 0.77
PCDHA1-203ENST00000504120 CCT4P50991 539 aaKnown RBP19.84■□□□□ 0.77
PCDHA1-203ENST00000504120 CDK19Q9BWU1 502 aa19.84■□□□□ 0.77
PCDHA1-203ENST00000504120 IFT57Q9NWB7 429 aa19.84■□□□□ 0.77
PCDHA1-203ENST00000504120 TRAK2O60296 914 aa19.84■□□□□ 0.77
PCDHA1-203ENST00000504120 SDF4Q9BRK5 362 aa19.84■□□□□ 0.77
PCDHA1-203ENST00000504120 SART3Q15020 963 aaKnown RBP19.84■□□□□ 0.77
PCDHA1-203ENST00000504120 PTPN23Q9H3S7 1636 aa19.84■□□□□ 0.77
PCDHA1-203ENST00000504120 SETQ01105 290 aaPredicted RBP19.84■□□□□ 0.77
PCDHA1-203ENST00000504120 TSR2Q969E8 191 aaKnown RBP19.84■□□□□ 0.77
PCDHA1-203ENST00000504120 CCDC27Q2M243 656 aa19.83■□□□□ 0.77
PCDHA1-203ENST00000504120 BCAR3O75815 825 aa19.83■□□□□ 0.77
PCDHA1-203ENST00000504120 ESCO1Q5FWF5 840 aa19.83■□□□□ 0.77
PCDHA1-203ENST00000504120 RPGRIP1LQ68CZ1 1315 aa19.83■□□□□ 0.76
PCDHA1-203ENST00000504120 SLC4A2P04920 1241 aa19.82■□□□□ 0.76
PCDHA1-203ENST00000504120 MEX3CQ5U5Q3 659 aaKnown RBP19.82■□□□□ 0.76
PCDHA1-203ENST00000504120 CABP1Q9NZU7 370 aa19.82■□□□□ 0.76
PCDHA1-203ENST00000504120 CAMSAP2Q08AD1 1489 aa19.82■□□□□ 0.76
PCDHA1-203ENST00000504120 PLB1Q6P1J6 1458 aa19.82■□□□□ 0.76
PCDHA1-203ENST00000504120 TEX35Q5T0J7 233 aa19.82■□□□□ 0.76
PCDHA1-203ENST00000504120 KIF14Q15058 1648 aa19.81■□□□□ 0.76
PCDHA1-203ENST00000504120 SULT6B1Q6IMI4 303 aa19.81■□□□□ 0.76
PCDHA1-203ENST00000504120 C1orf115Q9H7X2 142 aa19.81■□□□□ 0.76
PCDHA1-203ENST00000504120 HDGFL1Q5TGJ6 251 aa19.81■□□□□ 0.76
PCDHA1-203ENST00000504120 CCDC43Q96MW1 224 aaKnown RBP19.81■□□□□ 0.76
PCDHA1-203ENST00000504120 FAM13BQ9NYF5 915 aa19.81■□□□□ 0.76
PCDHA1-203ENST00000504120 DNAJC2Q99543 621 aaKnown RBP19.81■□□□□ 0.76
PCDHA1-203ENST00000504120 ARHGEF11O15085 1522 aa19.81■□□□□ 0.76
PCDHA1-203ENST00000504120 KIF6Q6ZMV9 814 aa19.8■□□□□ 0.76
PCDHA1-203ENST00000504120 ARGLU1Q9NWB6 273 aaPredicted RBP19.8■□□□□ 0.76
PCDHA1-203ENST00000504120 ATF7IPQ6VMQ6 1270 aa19.8■□□□□ 0.76
PCDHA1-203ENST00000504120 MNS1Q8NEH6 495 aa19.8■□□□□ 0.76
PCDHA1-203ENST00000504120 AKNAQ7Z591 1439 aa19.8■□□□□ 0.76
PCDHA1-203ENST00000504120 TATP17735 454 aaPredicted RBP19.79■□□□□ 0.76
PCDHA1-203ENST00000504120 ZNF771Q7L3S4 317 aaPredicted RBP19.79■□□□□ 0.76
PCDHA1-203ENST00000504120 ANKRD30BQ9BXX2 1392 aa19.79■□□□□ 0.76
PCDHA1-203ENST00000504120 FYB1O15117 783 aa19.79■□□□□ 0.76
PCDHA1-203ENST00000504120 MVPQ14764 893 aaKnown RBP19.79■□□□□ 0.76
PCDHA1-203ENST00000504120 CAVIN1Q6NZI2 390 aaKnown RBP19.78■□□□□ 0.76
PCDHA1-203ENST00000504120 CWC22Q9HCG8 908 aaKnown RBP19.78■□□□□ 0.76
PCDHA1-203ENST00000504120 THEMISQ8N1K5 641 aaPredicted RBP19.78■□□□□ 0.76
PCDHA1-203ENST00000504120 LRRCC1Q9C099 1032 aa19.78■□□□□ 0.76
PCDHA1-203ENST00000504120 ABCC5O15440 1437 aa19.78■□□□□ 0.76
PCDHA1-203ENST00000504120 ATAD2Q6PL18 1390 aa19.77■□□□□ 0.76
PCDHA1-203ENST00000504120 KINO60870 393 aaKnown RBP19.77■□□□□ 0.76
PCDHA1-203ENST00000504120 RNF214Q8ND24 703 aa19.77■□□□□ 0.75
PCDHA1-203ENST00000504120 BACH2Q9BYV9 841 aa19.77■□□□□ 0.75
PCDHA1-203ENST00000504120 SRCIN1Q9C0H9 1055 aa19.77■□□□□ 0.75
PCDHA1-203ENST00000504120 RTEL1-TNFRSF6BF6WH68 1400 aa19.77■□□□□ 0.75
PCDHA1-203ENST00000504120 PROSER2Q86WR7 435 aaPredicted RBP19.76■□□□□ 0.75
PCDHA1-203ENST00000504120 ZNF428Q96B54 188 aa19.76■□□□□ 0.75
PCDHA1-203ENST00000504120 ZNF396Q96N95 335 aaPredicted RBP19.76■□□□□ 0.75
PCDHA1-203ENST00000504120 PRPF40AO75400 957 aaKnown RBP19.76■□□□□ 0.75
PCDHA1-203ENST00000504120 TSPY26PQ9H489 355 aa19.76■□□□□ 0.75
PCDHA1-203ENST00000504120 CCDC158Q5M9N0 1113 aa19.75■□□□□ 0.75
PCDHA1-203ENST00000504120 ACBD3Q9H3P7 528 aa19.75■□□□□ 0.75
PCDHA1-203ENST00000504120 ZNF608Q9ULD9 1512 aaPredicted RBP19.75■□□□□ 0.75
PCDHA1-203ENST00000504120 THOC2Q8NI27 1593 aaKnown RBP19.74■□□□□ 0.75
PCDHA1-203ENST00000504120 ANKRD1Q15327 319 aa19.74■□□□□ 0.75
PCDHA1-203ENST00000504120 CYP46A1Q9Y6A2 500 aa19.74■□□□□ 0.75
PCDHA1-203ENST00000504120 SLC3A2P08195 630 aaKnown RBP19.74■□□□□ 0.75
PCDHA1-203ENST00000504120 TRIM5Q9C035 493 aa19.74■□□□□ 0.75
PCDHA1-203ENST00000504120 NAP1L1P55209 391 aaKnown RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms