RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 TBX22Q9Y458 520 aa8.13□□□□□ -1.11
CSTF1-207ENST00000498689 GABBR2O75899 941 aa8.12□□□□□ -1.11
CSTF1-207ENST00000498689 PELP1Q8IZL8 1130 aaKnown RBP8.12□□□□□ -1.11
CSTF1-207ENST00000498689 KLRG1Q96E93 195 aa8.12□□□□□ -1.11
CSTF1-207ENST00000498689 CFDP1Q9UEE9 299 aaPredicted RBP8.12□□□□□ -1.11
CSTF1-207ENST00000498689 AMOTL2Q9Y2J4 779 aa8.12□□□□□ -1.11
CSTF1-207ENST00000498689 XPCQ01831 940 aaPredicted RBP8.11□□□□□ -1.11
CSTF1-207ENST00000498689 SGIP1Q9BQI5 828 aa8.11□□□□□ -1.11
CSTF1-207ENST00000498689 NRXN3Q9Y4C0 1643 aa8.11□□□□□ -1.11
CSTF1-207ENST00000498689 ARHGAP31Q2M1Z3 1444 aa8.1□□□□□ -1.11
CSTF1-207ENST00000498689 ARHGEF28Q8N1W1 1705 aaKnown RBP8.09□□□□□ -1.11
CSTF1-207ENST00000498689 KIF3CO14782 793 aa8.09□□□□□ -1.11
CSTF1-207ENST00000498689 CSRNP3Q8WYN3 585 aa8.09□□□□□ -1.11
CSTF1-207ENST00000498689 RIMS2Q9UQ26 1411 aa8.09□□□□□ -1.11
CSTF1-207ENST00000498689 ADCY9O60503 1353 aa8.08□□□□□ -1.12
CSTF1-207ENST00000498689 AATKQ6ZMQ8 1374 aa8.08□□□□□ -1.12
CSTF1-207ENST00000498689 CCDC141Q6ZP82 1450 aa8.07□□□□□ -1.12
CSTF1-207ENST00000498689 COL24A1Q17RW2 1714 aa8.07□□□□□ -1.12
CSTF1-207ENST00000498689 YBX3P16989 372 aaKnown RBP eCLIP8.07□□□□□ -1.12
CSTF1-207ENST00000498689 NEXMIFQ5QGS0 1516 aa8.07□□□□□ -1.12
CSTF1-207ENST00000498689 PIK3R4Q99570 1358 aa8.07□□□□□ -1.12
CSTF1-207ENST00000498689 RPRD2Q5VT52 1461 aaKnown RBP8.06□□□□□ -1.12
CSTF1-207ENST00000498689 ARHGEF5Q12774 1597 aa8.06□□□□□ -1.12
CSTF1-207ENST00000498689 HSPA1AP0DMV8 641 aaKnown RBP8.06□□□□□ -1.12
CSTF1-207ENST00000498689 HSPA1BP0DMV9 641 aaKnown RBP8.06□□□□□ -1.12
CSTF1-207ENST00000498689 RGPD8O14715 1765 aaPredicted RBP8.06□□□□□ -1.12
CSTF1-207ENST00000498689 MTUS2Q5JR59 1369 aa8.06□□□□□ -1.12
CSTF1-207ENST00000498689 MAP3K5Q99683 1374 aa8.06□□□□□ -1.12
CSTF1-207ENST00000498689 ADGRL2O95490 1459 aa8.06□□□□□ -1.12
CSTF1-207ENST00000498689 CCDC18Q5T9S5 1454 aa8.06□□□□□ -1.12
CSTF1-207ENST00000498689 PLEKHG5O94827 1062 aa8.05□□□□□ -1.12
CSTF1-207ENST00000498689 CD44P16070 742 aaKnown RBP8.05□□□□□ -1.12
CSTF1-207ENST00000498689 CABLES1Q8TDN4 633 aa8.05□□□□□ -1.12
CSTF1-207ENST00000498689 ARXQ96QS3 562 aa8.05□□□□□ -1.12
CSTF1-207ENST00000498689 CCNB3Q8WWL7 1395 aa8.05□□□□□ -1.12
CSTF1-207ENST00000498689 FAM196AQ6ZSG2 479 aa8.04□□□□□ -1.12
CSTF1-207ENST00000498689 A0A0C4DFX4 3053 aa8.04□□□□□ -1.12
CSTF1-207ENST00000498689 ABCC5O15440 1437 aa8.03□□□□□ -1.12
CSTF1-207ENST00000498689 NLGN2Q8NFZ4 835 aa8.03□□□□□ -1.12
CSTF1-207ENST00000498689 FARP1Q9Y4F1 1045 aaPredicted RBP8.03□□□□□ -1.12
CSTF1-207ENST00000498689 TUBGCP6Q96RT7 1819 aa8.02□□□□□ -1.13
CSTF1-207ENST00000498689 MLLT1Q03111 559 aaPredicted RBP8.02□□□□□ -1.13
CSTF1-207ENST00000498689 KLHL34Q8N239 644 aa8.02□□□□□ -1.13
CSTF1-207ENST00000498689 COL14A1Q05707 1796 aaKnown RBP8.02□□□□□ -1.13
CSTF1-207ENST00000498689 TOPAZ1Q8N9V7 1692 aa8.02□□□□□ -1.13
CSTF1-207ENST00000498689 PEAK1Q9H792 1746 aa8.01□□□□□ -1.13
CSTF1-207ENST00000498689 CHGAP10645 457 aaKnown RBP8.01□□□□□ -1.13
CSTF1-207ENST00000498689 LMTK2Q8IWU2 1503 aa8.01□□□□□ -1.13
CSTF1-207ENST00000498689 FOXO3O43524 673 aa8□□□□□ -1.13
CSTF1-207ENST00000498689 MTFR1LQ9H019 292 aa8□□□□□ -1.13
CSTF1-207ENST00000498689 SPATA31A5Q5VU36 1347 aa8□□□□□ -1.13
CSTF1-207ENST00000498689 SPATA31A7Q8IWB4 1347 aa8□□□□□ -1.13
CSTF1-207ENST00000498689 LHX8Q68G74 356 aa7.99□□□□□ -1.13
CSTF1-207ENST00000498689 PROM2Q8N271 834 aa7.99□□□□□ -1.13
CSTF1-207ENST00000498689 NPHP3Q7Z494 1330 aa7.99□□□□□ -1.13
CSTF1-207ENST00000498689 PTF1AQ7RTS3 328 aa7.98□□□□□ -1.13
CSTF1-207ENST00000498689 BTG4Q9NY30 223 aa7.98□□□□□ -1.13
CSTF1-207ENST00000498689 METP08581 1390 aa7.97□□□□□ -1.13
CSTF1-207ENST00000498689 CASKIN1Q8WXD9 1431 aa7.97□□□□□ -1.13
CSTF1-207ENST00000498689 TOMM70O94826 608 aa7.97□□□□□ -1.13
CSTF1-207ENST00000498689 BCL11BQ9C0K0 894 aaPredicted RBP7.97□□□□□ -1.13
CSTF1-207ENST00000498689 FYCO1Q9BQS8 1478 aa7.97□□□□□ -1.13
CSTF1-207ENST00000498689 CRYBG1Q9Y4K1 1723 aa7.97□□□□□ -1.13
CSTF1-207ENST00000498689 SPATA31A3Q5VYP0 1347 aa7.97□□□□□ -1.13
CSTF1-207ENST00000498689 ESCO1Q5FWF5 840 aa7.96□□□□□ -1.14
CSTF1-207ENST00000498689 DUOX2Q9NRD8 1548 aa7.96□□□□□ -1.14
CSTF1-207ENST00000498689 CUL9Q8IWT3 2517 aa7.96□□□□□ -1.14
CSTF1-207ENST00000498689 USP19O94966 1318 aa7.96□□□□□ -1.14
CSTF1-207ENST00000498689 QSER1Q2KHR3 1735 aa7.95□□□□□ -1.14
CSTF1-207ENST00000498689 GRIN3BO60391 1043 aa7.95□□□□□ -1.14
CSTF1-207ENST00000498689 RGS19P49795 217 aa7.95□□□□□ -1.14
CSTF1-207ENST00000498689 HAP1P54257 671 aaPredicted RBP7.95□□□□□ -1.14
CSTF1-207ENST00000498689 ABHD8Q96I13 439 aa7.95□□□□□ -1.14
CSTF1-207ENST00000498689 PARP4Q9UKK3 1724 aaKnown RBP7.95□□□□□ -1.14
CSTF1-207ENST00000498689 PAPPAQ13219 1627 aa7.94□□□□□ -1.14
CSTF1-207ENST00000498689 SLC15A2Q16348 729 aa7.94□□□□□ -1.14
CSTF1-207ENST00000498689 TECPR2O15040 1411 aa7.94□□□□□ -1.14
CSTF1-207ENST00000498689 TULP4Q9NRJ4 1543 aa7.93□□□□□ -1.14
CSTF1-207ENST00000498689 AKAP12Q02952 1782 aa7.93□□□□□ -1.14
CSTF1-207ENST00000498689 POTEIP0CG38 1075 aa7.93□□□□□ -1.14
CSTF1-207ENST00000498689 KIF1AQ12756 1690 aa7.92□□□□□ -1.14
CSTF1-207ENST00000498689 PLSCR1O15162 318 aa7.92□□□□□ -1.14
CSTF1-207ENST00000498689 HDGFP51858 240 aaKnown RBP7.92□□□□□ -1.14
CSTF1-207ENST00000498689 NMRK2Q9NPI5 230 aa7.92□□□□□ -1.14
CSTF1-207ENST00000498689 SLC52A1Q9NWF4 448 aa7.92□□□□□ -1.14
CSTF1-207ENST00000498689 SZT2Q5T011 3432 aa7.92□□□□□ -1.14
CSTF1-207ENST00000498689 SPDYE4A6NLX3 237 aa7.91□□□□□ -1.14
CSTF1-207ENST00000498689 FOXN1O15353 648 aa7.91□□□□□ -1.14
CSTF1-207ENST00000498689 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.91□□□□□ -1.14
CSTF1-207ENST00000498689 CREBZFQ9NS37 354 aa7.91□□□□□ -1.14
CSTF1-207ENST00000498689 STK32BQ9NY57 414 aa7.91□□□□□ -1.14
CSTF1-207ENST00000498689 SPATA31A1Q5TZJ5 1347 aa7.91□□□□□ -1.14
CSTF1-207ENST00000498689 CDC42BPGQ6DT37 1551 aa7.91□□□□□ -1.14
CSTF1-207ENST00000498689 FMN2Q9NZ56 1722 aa7.91□□□□□ -1.14
CSTF1-207ENST00000498689 VIRMAQ69YN4 1812 aaKnown RBP7.91□□□□□ -1.14
CSTF1-207ENST00000498689 KAT6BQ8WYB5 2073 aa7.91□□□□□ -1.14
CSTF1-207ENST00000498689 IQGAP3Q86VI3 1631 aa7.9□□□□□ -1.14
CSTF1-207ENST00000498689 TNS3Q68CZ2 1445 aa7.9□□□□□ -1.14
CSTF1-207ENST00000498689 DHX57Q6P158 1386 aaKnown RBP7.9□□□□□ -1.14
CSTF1-207ENST00000498689 ROBO2Q9HCK4 1378 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms