RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 CLUAP1Q96AJ1 413 aa19.8■□□□□ 0.76
CALD1-222ENST00000495522 WAPLQ7Z5K2 1190 aa19.79■□□□□ 0.76
CALD1-222ENST00000495522 COG6Q9Y2V7 657 aa19.79■□□□□ 0.76
CALD1-222ENST00000495522 AAMPQ13685 434 aa19.78■□□□□ 0.76
CALD1-222ENST00000495522 ESF1Q9H501 851 aaKnown RBP19.78■□□□□ 0.76
CALD1-222ENST00000495522 MAPK8IP3Q9UPT6 1336 aa19.78■□□□□ 0.76
CALD1-222ENST00000495522 NRXN3Q9Y4C0 1643 aa19.78■□□□□ 0.76
CALD1-222ENST00000495522 PNPLA6Q8IY17 1366 aa19.78■□□□□ 0.76
CALD1-222ENST00000495522 FAM161AQ3B820 660 aa19.77■□□□□ 0.76
CALD1-222ENST00000495522 ZMYM3Q14202 1370 aa19.77■□□□□ 0.76
CALD1-222ENST00000495522 DIAPH1O60610 1272 aaKnown RBP19.77■□□□□ 0.75
CALD1-222ENST00000495522 CT47B1P0C2W7 299 aaPredicted RBP19.77■□□□□ 0.75
CALD1-222ENST00000495522 TMPOP42166 694 aaKnown RBP19.77■□□□□ 0.75
CALD1-222ENST00000495522 PNNQ9H307 717 aaKnown RBP19.76■□□□□ 0.75
CALD1-222ENST00000495522 IGHDP01880 384 aa19.75■□□□□ 0.75
CALD1-222ENST00000495522 CDC42BPGQ6DT37 1551 aa19.74■□□□□ 0.75
CALD1-222ENST00000495522 RGS3P49796 1198 aa19.74■□□□□ 0.75
CALD1-222ENST00000495522 TRIM35Q9UPQ4 493 aa19.74■□□□□ 0.75
CALD1-222ENST00000495522 C8orf34Q49A92 452 aa19.73■□□□□ 0.75
CALD1-222ENST00000495522 DDRGK1Q96HY6 314 aa19.73■□□□□ 0.75
CALD1-222ENST00000495522 METP08581 1390 aa19.73■□□□□ 0.75
CALD1-222ENST00000495522 IL16Q14005 1332 aa19.73■□□□□ 0.75
CALD1-222ENST00000495522 HDGFP51858 240 aaKnown RBP19.73■□□□□ 0.75
CALD1-222ENST00000495522 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.73■□□□□ 0.75
CALD1-222ENST00000495522 KNDC1Q76NI1 1749 aa19.72■□□□□ 0.75
CALD1-222ENST00000495522 WASLO00401 505 aaPredicted RBP19.72■□□□□ 0.75
CALD1-222ENST00000495522 BCL2L13Q9BXK5 485 aa19.72■□□□□ 0.75
CALD1-222ENST00000495522 EDC4Q6P2E9 1401 aaKnown RBP19.71■□□□□ 0.75
CALD1-222ENST00000495522 RLBP1P12271 317 aa19.71■□□□□ 0.75
CALD1-222ENST00000495522 CPSF1Q10570 1443 aaKnown RBP19.71■□□□□ 0.75
CALD1-222ENST00000495522 FAM135BQ49AJ0 1406 aa19.71■□□□□ 0.75
CALD1-222ENST00000495522 PPIP5K1Q6PFW1 1433 aa19.71■□□□□ 0.75
CALD1-222ENST00000495522 TNRQ92752 1358 aa19.7■□□□□ 0.74
CALD1-222ENST00000495522 PMFBP1Q8TBY8 1022 aa19.7■□□□□ 0.74
CALD1-222ENST00000495522 TSR2Q969E8 191 aaKnown RBP19.7■□□□□ 0.74
CALD1-222ENST00000495522 SIRT1Q96EB6 747 aa19.7■□□□□ 0.74
CALD1-222ENST00000495522 TECPR2O15040 1411 aa19.7■□□□□ 0.74
CALD1-222ENST00000495522 FCHSD2O94868 740 aa19.69■□□□□ 0.74
CALD1-222ENST00000495522 RIPK4P57078 832 aa19.69■□□□□ 0.74
CALD1-222ENST00000495522 NBR1Q14596 966 aa19.69■□□□□ 0.74
CALD1-222ENST00000495522 POLKQ9UBT6 870 aa19.69■□□□□ 0.74
CALD1-222ENST00000495522 ZKSCAN2Q63HK3 967 aa19.68■□□□□ 0.74
CALD1-222ENST00000495522 TNNQ9UQP3 1299 aa19.68■□□□□ 0.74
CALD1-222ENST00000495522 EXOSC9Q06265 439 aaKnown RBP19.68■□□□□ 0.74
CALD1-222ENST00000495522 TXNDC2Q86VQ3 553 aa19.68■□□□□ 0.74
CALD1-222ENST00000495522 CPS1P31327 1500 aa19.68■□□□□ 0.74
CALD1-222ENST00000495522 LRRC7Q96NW7 1537 aa19.68■□□□□ 0.74
CALD1-222ENST00000495522 MVPQ14764 893 aaKnown RBP19.66■□□□□ 0.74
CALD1-222ENST00000495522 MAP2P11137 1827 aaKnown RBP19.65■□□□□ 0.74
CALD1-222ENST00000495522 TMEM2Q9UHN6 1383 aa19.65■□□□□ 0.74
CALD1-222ENST00000495522 PPM1GO15355 546 aaPredicted RBP19.65■□□□□ 0.74
CALD1-222ENST00000495522 NUDT16Q96DE0 195 aaKnown RBP19.65■□□□□ 0.74
CALD1-222ENST00000495522 RSPH6AQ9H0K4 717 aa19.65■□□□□ 0.74
CALD1-222ENST00000495522 SMC4Q9NTJ3 1288 aa19.65■□□□□ 0.74
CALD1-222ENST00000495522 UBR1Q8IWV7 1749 aa19.65■□□□□ 0.74
CALD1-222ENST00000495522 NEFMP07197 916 aa19.64■□□□□ 0.74
CALD1-222ENST00000495522 FTSJ3Q8IY81 847 aaKnown RBP19.64■□□□□ 0.74
CALD1-222ENST00000495522 DZIP1LQ8IYY4 767 aaKnown RBP19.64■□□□□ 0.74
CALD1-222ENST00000495522 PCDHB15Q9Y5E8 787 aa19.64■□□□□ 0.74
CALD1-222ENST00000495522 VIRMAQ69YN4 1812 aaKnown RBP19.64■□□□□ 0.73
CALD1-222ENST00000495522 MON2Q7Z3U7 1717 aa19.64■□□□□ 0.73
CALD1-222ENST00000495522 CCDC61Q9Y6R9 512 aa19.63■□□□□ 0.73
CALD1-222ENST00000495522 AATKQ6ZMQ8 1374 aa19.63■□□□□ 0.73
CALD1-222ENST00000495522 PRKAR2BP31323 418 aa19.63■□□□□ 0.73
CALD1-222ENST00000495522 CDK12Q9NYV4 1490 aaPredicted RBP19.63■□□□□ 0.73
CALD1-222ENST00000495522 FBLN1P23142 703 aa19.62■□□□□ 0.73
CALD1-222ENST00000495522 NME9Q86XW9 330 aa19.62■□□□□ 0.73
CALD1-222ENST00000495522 RWDD1Q9H446 243 aaPredicted RBP19.62■□□□□ 0.73
CALD1-222ENST00000495522 SSH1Q8WYL5 1049 aa19.61■□□□□ 0.73
CALD1-222ENST00000495522 AKAP12Q02952 1782 aa19.61■□□□□ 0.73
CALD1-222ENST00000495522 RTL5Q5HYW3 569 aaPredicted RBP19.6■□□□□ 0.73
CALD1-222ENST00000495522 EMILIN1Q9Y6C2 1016 aa19.6■□□□□ 0.73
CALD1-222ENST00000495522 ITSN1Q15811 1721 aa19.6■□□□□ 0.73
CALD1-222ENST00000495522 COG3Q96JB2 828 aa19.6■□□□□ 0.73
CALD1-222ENST00000495522 TRIM27P14373 513 aa19.59■□□□□ 0.73
CALD1-222ENST00000495522 IL13P35225 146 aa19.59■□□□□ 0.73
CALD1-222ENST00000495522 NFE2L2Q16236 605 aa19.59■□□□□ 0.73
CALD1-222ENST00000495522 ATF7IPQ6VMQ6 1270 aa19.59■□□□□ 0.73
CALD1-222ENST00000495522 C3P01024 1663 aa19.58■□□□□ 0.73
CALD1-222ENST00000495522 ADAMTS13Q76LX8 1427 aa19.58■□□□□ 0.72
CALD1-222ENST00000495522 ZNF692Q9BU19 519 aaPredicted RBP19.58■□□□□ 0.72
CALD1-222ENST00000495522 KIF16BQ96L93 1317 aa19.57■□□□□ 0.72
CALD1-222ENST00000495522 ZRANB1Q9UGI0 708 aa19.57■□□□□ 0.72
CALD1-222ENST00000495522 ROBO2Q9HCK4 1378 aa19.57■□□□□ 0.72
CALD1-222ENST00000495522 NCKAP5LQ9HCH0 1330 aa19.57■□□□□ 0.72
CALD1-222ENST00000495522 ALDH1L2Q3SY69 923 aa19.57■□□□□ 0.72
CALD1-222ENST00000495522 HMOX1P09601 288 aa19.56■□□□□ 0.72
CALD1-222ENST00000495522 CALD1Q05682 793 aaKnown RBP19.56■□□□□ 0.72
CALD1-222ENST00000495522 NOB1Q9ULX3 412 aaKnown RBP19.56■□□□□ 0.72
CALD1-222ENST00000495522 DDX19BQ9UMR2 479 aa19.56■□□□□ 0.72
CALD1-222ENST00000495522 PLEKHG1Q9ULL1 1385 aa19.56■□□□□ 0.72
CALD1-222ENST00000495522 PRR36Q9H6K5 1346 aa19.56■□□□□ 0.72
CALD1-222ENST00000495522 DAXXQ9UER7 740 aaPredicted RBP19.56■□□□□ 0.72
CALD1-222ENST00000495522 PDZRN3Q9UPQ7 1066 aa19.56■□□□□ 0.72
CALD1-222ENST00000495522 LAS1LQ9Y4W2 734 aaKnown RBP19.56■□□□□ 0.72
CALD1-222ENST00000495522 IPO8O15397 1037 aaKnown RBP19.55■□□□□ 0.72
CALD1-222ENST00000495522 PHACTR3Q96KR7 559 aa19.55■□□□□ 0.72
CALD1-222ENST00000495522 ZNF428Q96B54 188 aa19.54■□□□□ 0.72
CALD1-222ENST00000495522 ITPRIPQ8IWB1 547 aa19.54■□□□□ 0.72
CALD1-222ENST00000495522 FER1L4A9Z1Z3 1794 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms