RNA–Protein interactions for RNA: ENST00000494300.1

NXF3-206, Transcript of nuclear RNA export factor 3, humanhuman

TSL 3

Gene NXF3, Length 543 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-206ENST00000494300 SYNMO15061 1565 aa8.69□□□□□ -1.02
NXF3-206ENST00000494300 ZMYND10O75800 440 aa8.68□□□□□ -1.02
NXF3-206ENST00000494300 RBM25P49756 843 aaKnown RBP8.68□□□□□ -1.02
NXF3-206ENST00000494300 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.68□□□□□ -1.02
NXF3-206ENST00000494300 NCKAP5LQ9HCH0 1330 aa8.68□□□□□ -1.02
NXF3-206ENST00000494300 PTPRTO14522 1441 aa8.68□□□□□ -1.02
NXF3-206ENST00000494300 ADGRB3O60242 1522 aa8.68□□□□□ -1.02
NXF3-206ENST00000494300 TRPM2O94759 1503 aa8.68□□□□□ -1.02
NXF3-206ENST00000494300 PIK3C2BO00750 1634 aa8.67□□□□□ -1.02
NXF3-206ENST00000494300 MFAP1P55081 439 aaKnown RBP8.67□□□□□ -1.02
NXF3-206ENST00000494300 SPHKAPQ2M3C7 1700 aa8.67□□□□□ -1.02
NXF3-206ENST00000494300 PCGF6Q9BYE7 350 aa8.67□□□□□ -1.02
NXF3-206ENST00000494300 RYDENQ9NUL5 291 aaKnown RBP8.67□□□□□ -1.02
NXF3-206ENST00000494300 TMEM2Q9UHN6 1383 aa8.67□□□□□ -1.02
NXF3-206ENST00000494300 SCAF11Q99590 1463 aaKnown RBP8.66□□□□□ -1.02
NXF3-206ENST00000494300 BRD2P25440 801 aaKnown RBP8.66□□□□□ -1.02
NXF3-206ENST00000494300 TMCO4Q5TGY1 634 aa8.66□□□□□ -1.02
NXF3-206ENST00000494300 NPHP4O75161 1426 aaPredicted RBP8.65□□□□□ -1.02
NXF3-206ENST00000494300 MICALL2Q8IY33 904 aa8.65□□□□□ -1.02
NXF3-206ENST00000494300 IL27Q8NEV9 243 aa8.65□□□□□ -1.02
NXF3-206ENST00000494300 UBR1Q8IWV7 1749 aa8.65□□□□□ -1.03
NXF3-206ENST00000494300 KDM5AP29375 1690 aaKnown RBP8.65□□□□□ -1.03
NXF3-206ENST00000494300 RIMS2Q9UQ26 1411 aa8.64□□□□□ -1.03
NXF3-206ENST00000494300 SLAIN1Q8ND83 568 aa8.64□□□□□ -1.03
NXF3-206ENST00000494300 GPBP1L1Q9HC44 474 aaPredicted RBP8.64□□□□□ -1.03
NXF3-206ENST00000494300 SLIT1O75093 1534 aa8.64□□□□□ -1.03
NXF3-206ENST00000494300 RPGRIP1LQ68CZ1 1315 aa8.63□□□□□ -1.03
NXF3-206ENST00000494300 PPP1R37O75864 691 aa8.63□□□□□ -1.03
NXF3-206ENST00000494300 RGL3Q3MIN7 710 aa8.63□□□□□ -1.03
NXF3-206ENST00000494300 NUTM2DQ5VT03 806 aaPredicted RBP8.63□□□□□ -1.03
NXF3-206ENST00000494300 DHX37Q8IY37 1157 aaKnown RBP8.63□□□□□ -1.03
NXF3-206ENST00000494300 UBE2Q2Q8WVN8 375 aa8.63□□□□□ -1.03
NXF3-206ENST00000494300 TMEM121BQ9BXQ6 578 aaPredicted RBP8.63□□□□□ -1.03
NXF3-206ENST00000494300 TMEM131LA2VDJ0 1609 aa8.62□□□□□ -1.03
NXF3-206ENST00000494300 CLTCL1P53675 1640 aa8.62□□□□□ -1.03
NXF3-206ENST00000494300 LTKP29376 864 aa8.62□□□□□ -1.03
NXF3-206ENST00000494300 POLR1AO95602 1720 aaPredicted RBP8.62□□□□□ -1.03
NXF3-206ENST00000494300 ARHGAP23Q9P227 1491 aa8.62□□□□□ -1.03
NXF3-206ENST00000494300 AEBP1Q8IUX7 1158 aa8.61□□□□□ -1.03
NXF3-206ENST00000494300 MED14O60244 1454 aa8.61□□□□□ -1.03
NXF3-206ENST00000494300 KIF1BO60333 1816 aa8.61□□□□□ -1.03
NXF3-206ENST00000494300 ANKRD30BQ9BXX2 1392 aa8.61□□□□□ -1.03
NXF3-206ENST00000494300 PLEKHG1Q9ULL1 1385 aa8.61□□□□□ -1.03
NXF3-206ENST00000494300 E9PSI1 815 aa8.6□□□□□ -1.03
NXF3-206ENST00000494300 STRCQ7RTU9 1775 aa8.6□□□□□ -1.03
NXF3-206ENST00000494300 IQGAP1P46940 1657 aa8.59□□□□□ -1.03
NXF3-206ENST00000494300 SLC26A8Q96RN1 970 aa8.59□□□□□ -1.03
NXF3-206ENST00000494300 ZFYVE9O95405 1425 aa8.59□□□□□ -1.03
NXF3-206ENST00000494300 ZNF335Q9H4Z2 1342 aaPredicted RBP8.58□□□□□ -1.04
NXF3-206ENST00000494300 NEURL4Q96JN8 1562 aa8.58□□□□□ -1.04
NXF3-206ENST00000494300 A6NJR5 290 aa8.58□□□□□ -1.04
NXF3-206ENST00000494300 NEUROD1Q13562 356 aa8.58□□□□□ -1.04
NXF3-206ENST00000494300 BARGINQ6ZT62 677 aa8.58□□□□□ -1.04
NXF3-206ENST00000494300 GZF1Q9H116 711 aaPredicted RBP8.58□□□□□ -1.04
NXF3-206ENST00000494300 SPATA31E1Q6ZUB1 1445 aa8.57□□□□□ -1.04
NXF3-206ENST00000494300 TRAK2O60296 914 aa8.57□□□□□ -1.04
NXF3-206ENST00000494300 CCER1Q8TC90 406 aaPredicted RBP8.57□□□□□ -1.04
NXF3-206ENST00000494300 DCAF11Q8TEB1 546 aa8.57□□□□□ -1.04
NXF3-206ENST00000494300 STAC3Q96MF2 364 aa8.57□□□□□ -1.04
NXF3-206ENST00000494300 DHX57Q6P158 1386 aaKnown RBP8.57□□□□□ -1.04
NXF3-206ENST00000494300 TESPA1A2RU30 521 aaPredicted RBP8.56□□□□□ -1.04
NXF3-206ENST00000494300 ONECUT3O60422 494 aaPredicted RBP8.56□□□□□ -1.04
NXF3-206ENST00000494300 FLIIQ13045 1269 aa8.56□□□□□ -1.04
NXF3-206ENST00000494300 KDM4CQ9H3R0 1056 aa8.56□□□□□ -1.04
NXF3-206ENST00000494300 TBX22Q9Y458 520 aa8.56□□□□□ -1.04
NXF3-206ENST00000494300 MYO5BQ9ULV0 1848 aa8.56□□□□□ -1.04
NXF3-206ENST00000494300 DIP2AQ14689 1571 aa8.56□□□□□ -1.04
NXF3-206ENST00000494300 CPS1P31327 1500 aa8.55□□□□□ -1.04
NXF3-206ENST00000494300 NEXMIFQ5QGS0 1516 aa8.55□□□□□ -1.04
NXF3-206ENST00000494300 KCNA6P17658 529 aa8.55□□□□□ -1.04
NXF3-206ENST00000494300 FAM177A1Q8N128 213 aaPredicted RBP8.55□□□□□ -1.04
NXF3-206ENST00000494300 CERKQ8TCT0 537 aa8.55□□□□□ -1.04
NXF3-206ENST00000494300 WDR70Q9NW82 654 aa8.55□□□□□ -1.04
NXF3-206ENST00000494300 TONSLQ96HA7 1378 aa8.55□□□□□ -1.04
NXF3-206ENST00000494300 PIK3R4Q99570 1358 aa8.54□□□□□ -1.04
NXF3-206ENST00000494300 PROSER2Q86WR7 435 aaPredicted RBP8.54□□□□□ -1.04
NXF3-206ENST00000494300 SIN3AQ96ST3 1273 aa8.53□□□□□ -1.04
NXF3-206ENST00000494300 ADGRF5Q8IZF2 1346 aa8.53□□□□□ -1.04
NXF3-206ENST00000494300 SETBP1Q9Y6X0 1596 aa8.52□□□□□ -1.04
NXF3-206ENST00000494300 MYOM2P54296 1465 aa8.52□□□□□ -1.05
NXF3-206ENST00000494300 TMEM92Q6UXU6 159 aa8.52□□□□□ -1.05
NXF3-206ENST00000494300 CADPS2Q86UW7 1296 aa8.52□□□□□ -1.05
NXF3-206ENST00000494300 AK7Q96M32 723 aa8.52□□□□□ -1.05
NXF3-206ENST00000494300 AMOTL2Q9Y2J4 779 aa8.52□□□□□ -1.05
NXF3-206ENST00000494300 ADAMTS13Q76LX8 1427 aa8.52□□□□□ -1.05
NXF3-206ENST00000494300 CLSPNQ9HAW4 1339 aa8.52□□□□□ -1.05
NXF3-206ENST00000494300 NKTRP30414 1462 aaKnown RBP8.51□□□□□ -1.05
NXF3-206ENST00000494300 PPLO60437 1756 aa8.51□□□□□ -1.05
NXF3-206ENST00000494300 TMC2Q8TDI7 906 aa8.51□□□□□ -1.05
NXF3-206ENST00000494300 ARHGEF1Q92888 912 aaKnown RBP8.51□□□□□ -1.05
NXF3-206ENST00000494300 USP35Q9P2H5 1018 aa8.51□□□□□ -1.05
NXF3-206ENST00000494300 UBAP1LF5GYI3 381 aa8.5□□□□□ -1.05
NXF3-206ENST00000494300 SNPHO15079 494 aa8.5□□□□□ -1.05
NXF3-206ENST00000494300 TOM1O60784 492 aa8.5□□□□□ -1.05
NXF3-206ENST00000494300 PIK3C2GO75747 1445 aa8.5□□□□□ -1.05
NXF3-206ENST00000494300 IRF5Q13568 498 aa8.5□□□□□ -1.05
NXF3-206ENST00000494300 FAM163AQ96GL9 167 aaPredicted RBP8.5□□□□□ -1.05
NXF3-206ENST00000494300 STK26Q9P289 416 aa8.5□□□□□ -1.05
NXF3-206ENST00000494300 LTBP4Q8N2S1 1624 aa8.5□□□□□ -1.05
NXF3-206ENST00000494300 IQSEC2Q5JU85 1478 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms