RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 POLR3AO14802 1390 aaPredicted RBP17.1■□□□□ 0.33
SNX17-208ENST00000493711 ANKRD36BQ8N2N9 1353 aa17.1■□□□□ 0.33
SNX17-208ENST00000493711 ORAI2Q96SN7 254 aa17.09■□□□□ 0.33
SNX17-208ENST00000493711 ACEP12821 1306 aa17.09■□□□□ 0.33
SNX17-208ENST00000493711 XIRP1Q702N8 1843 aaKnown RBP17.09■□□□□ 0.33
SNX17-208ENST00000493711 NPHP3Q7Z494 1330 aa17.08■□□□□ 0.32
SNX17-208ENST00000493711 BRINP3Q76B58 766 aa17.08■□□□□ 0.32
SNX17-208ENST00000493711 CPSF1Q10570 1443 aaKnown RBP17.07■□□□□ 0.32
SNX17-208ENST00000493711 PSME1Q06323 249 aa17.07■□□□□ 0.32
SNX17-208ENST00000493711 PMFBP1Q8TBY8 1022 aa17.07■□□□□ 0.32
SNX17-208ENST00000493711 PANK3Q9H999 370 aa17.07■□□□□ 0.32
SNX17-208ENST00000493711 DDX10Q13206 875 aaKnown RBP17.06■□□□□ 0.32
SNX17-208ENST00000493711 KTN1Q86UP2 1357 aaKnown RBP17.05■□□□□ 0.32
SNX17-208ENST00000493711 KNSTRNQ9Y448 316 aa17.05■□□□□ 0.32
SNX17-208ENST00000493711 USP32Q8NFA0 1604 aa17.05■□□□□ 0.32
SNX17-208ENST00000493711 A0A1W2PP64 1363 aa17.04■□□□□ 0.32
SNX17-208ENST00000493711 ITSN1Q15811 1721 aa17.04■□□□□ 0.32
SNX17-208ENST00000493711 KIF1AQ12756 1690 aa17.04■□□□□ 0.32
SNX17-208ENST00000493711 TOPAZ1Q8N9V7 1692 aa17.04■□□□□ 0.32
SNX17-208ENST00000493711 FOXO3O43524 673 aa17.03■□□□□ 0.32
SNX17-208ENST00000493711 EDC4Q6P2E9 1401 aaKnown RBP17.03■□□□□ 0.32
SNX17-208ENST00000493711 TTC21AQ8NDW8 1320 aa17.02■□□□□ 0.32
SNX17-208ENST00000493711 CD163L1Q9NR16 1453 aa17.02■□□□□ 0.32
SNX17-208ENST00000493711 KRT28Q7Z3Y7 464 aa17.02■□□□□ 0.32
SNX17-208ENST00000493711 USP6P35125 1406 aa17.02■□□□□ 0.31
SNX17-208ENST00000493711 CGNL1Q0VF96 1302 aa17.01■□□□□ 0.31
SNX17-208ENST00000493711 CARD14Q9BXL6 1004 aa17■□□□□ 0.31
SNX17-208ENST00000493711 SBNO1A3KN83 1393 aa17■□□□□ 0.31
SNX17-208ENST00000493711 NSD3Q9BZ95 1437 aa16.99■□□□□ 0.31
SNX17-208ENST00000493711 PER1O15534 1290 aaPredicted RBP16.99■□□□□ 0.31
SNX17-208ENST00000493711 POTEAQ6S8J7 498 aa16.99■□□□□ 0.31
SNX17-208ENST00000493711 NPC1L1Q9UHC9 1359 aa16.99■□□□□ 0.31
SNX17-208ENST00000493711 SOS2Q07890 1332 aaPredicted RBP16.98■□□□□ 0.31
SNX17-208ENST00000493711 TTC21BQ7Z4L5 1316 aa16.98■□□□□ 0.31
SNX17-208ENST00000493711 MYOM1P52179 1685 aa16.98■□□□□ 0.31
SNX17-208ENST00000493711 ZBTB12Q9Y330 459 aaPredicted RBP16.98■□□□□ 0.31
SNX17-208ENST00000493711 NSD2O96028 1365 aa16.98■□□□□ 0.31
SNX17-208ENST00000493711 SSH2Q76I76 1423 aa16.97■□□□□ 0.31
SNX17-208ENST00000493711 PAK3O75914 559 aaPredicted RBP16.96■□□□□ 0.31
SNX17-208ENST00000493711 ARHGEF10O15013 1369 aa16.95■□□□□ 0.3
SNX17-208ENST00000493711 LRRC59Q96AG4 307 aaKnown RBP16.95■□□□□ 0.3
SNX17-208ENST00000493711 PXDNQ92626 1479 aa16.94■□□□□ 0.3
SNX17-208ENST00000493711 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.94■□□□□ 0.3
SNX17-208ENST00000493711 AHDC1Q5TGY3 1603 aaPredicted RBP16.94■□□□□ 0.3
SNX17-208ENST00000493711 FYB1O15117 783 aa16.93■□□□□ 0.3
SNX17-208ENST00000493711 XPCQ01831 940 aaPredicted RBP16.93■□□□□ 0.3
SNX17-208ENST00000493711 AMER1Q5JTC6 1135 aaPredicted RBP16.93■□□□□ 0.3
SNX17-208ENST00000493711 NLRP13Q86W25 1043 aa16.93■□□□□ 0.3
SNX17-208ENST00000493711 ABTB2Q8N961 1025 aa16.93■□□□□ 0.3
SNX17-208ENST00000493711 ROBO1Q9Y6N7 1651 aa16.93■□□□□ 0.3
SNX17-208ENST00000493711 SPATA31A3Q5VYP0 1347 aa16.93■□□□□ 0.3
SNX17-208ENST00000493711 USP31Q70CQ4 1352 aa16.92■□□□□ 0.3
SNX17-208ENST00000493711 COG3Q96JB2 828 aa16.92■□□□□ 0.3
SNX17-208ENST00000493711 TNS3Q68CZ2 1445 aa16.92■□□□□ 0.3
SNX17-208ENST00000493711 DIEXFQ68CQ4 756 aaKnown RBP16.91■□□□□ 0.3
SNX17-208ENST00000493711 DDX17Q92841 729 aaKnown RBP16.91■□□□□ 0.3
SNX17-208ENST00000493711 RBM42Q9BTD8 480 aaKnown RBP16.91■□□□□ 0.3
SNX17-208ENST00000493711 NLRP6P59044 892 aa16.9■□□□□ 0.3
SNX17-208ENST00000493711 NME9Q86XW9 330 aa16.9■□□□□ 0.3
SNX17-208ENST00000493711 RGPD8O14715 1765 aaPredicted RBP16.89■□□□□ 0.3
SNX17-208ENST00000493711 AKAP12Q02952 1782 aa16.89■□□□□ 0.3
SNX17-208ENST00000493711 ANP32CO43423 234 aa16.89■□□□□ 0.29
SNX17-208ENST00000493711 RALBP1Q15311 655 aa16.89■□□□□ 0.29
SNX17-208ENST00000493711 LMOD2Q6P5Q4 547 aa16.89■□□□□ 0.29
SNX17-208ENST00000493711 MORC1Q86VD1 984 aa16.89■□□□□ 0.29
SNX17-208ENST00000493711 MON2Q7Z3U7 1717 aa16.89■□□□□ 0.29
SNX17-208ENST00000493711 NHSL1Q5SYE7 1610 aa16.88■□□□□ 0.29
SNX17-208ENST00000493711 GGNBP2Q9H3C7 697 aa16.88■□□□□ 0.29
SNX17-208ENST00000493711 NRKQ7Z2Y5 1582 aa16.87■□□□□ 0.29
SNX17-208ENST00000493711 MKRN4PQ13434 485 aaPredicted RBP16.87■□□□□ 0.29
SNX17-208ENST00000493711 CC2D1BQ5T0F9 858 aaKnown RBP16.87■□□□□ 0.29
SNX17-208ENST00000493711 KCNH5Q8NCM2 988 aa16.87■□□□□ 0.29
SNX17-208ENST00000493711 USP19O94966 1318 aa16.85■□□□□ 0.29
SNX17-208ENST00000493711 OVOS2A0A0J9YW53 1432 aa16.85■□□□□ 0.29
SNX17-208ENST00000493711 OVOS2Q6IE36 1432 aa16.85■□□□□ 0.29
SNX17-208ENST00000493711 JCADQ9P266 1359 aa16.84■□□□□ 0.29
SNX17-208ENST00000493711 PARD3Q8TEW0 1356 aa16.83■□□□□ 0.28
SNX17-208ENST00000493711 PRKRIP1Q9H875 184 aaPredicted RBP16.83■□□□□ 0.28
SNX17-208ENST00000493711 TRPM3Q9HCF6 1732 aaPredicted RBP16.83■□□□□ 0.28
SNX17-208ENST00000493711 AATKQ6ZMQ8 1374 aa16.82■□□□□ 0.28
SNX17-208ENST00000493711 PNPLA6Q8IY17 1366 aa16.82■□□□□ 0.28
SNX17-208ENST00000493711 NUTM2GQ5VZR2 741 aa16.82■□□□□ 0.28
SNX17-208ENST00000493711 GCP02774 474 aa16.81■□□□□ 0.28
SNX17-208ENST00000493711 HAP1P54257 671 aaPredicted RBP16.81■□□□□ 0.28
SNX17-208ENST00000493711 ZRANB1Q9UGI0 708 aa16.81■□□□□ 0.28
SNX17-208ENST00000493711 COL16A1Q07092 1604 aaPredicted RBP16.81■□□□□ 0.28
SNX17-208ENST00000493711 SRCAPQ6ZRS2 3230 aa16.81■□□□□ 0.28
SNX17-208ENST00000493711 PHLPP1O60346 1717 aa16.8■□□□□ 0.28
SNX17-208ENST00000493711 ALS2Q96Q42 1657 aa16.79■□□□□ 0.28
SNX17-208ENST00000493711 SPATA31A6Q5VVP1 1343 aa16.79■□□□□ 0.28
SNX17-208ENST00000493711 MYBBP1AQ9BQG0 1328 aaKnown RBP16.79■□□□□ 0.28
SNX17-208ENST00000493711 UPF1Q92900 1129 aaKnown RBP eCLIP16.79■□□□□ 0.28
SNX17-208ENST00000493711 PIK3C2AO00443 1686 aa16.78■□□□□ 0.28
SNX17-208ENST00000493711 CNGB1Q14028 1251 aaPredicted RBP16.78■□□□□ 0.28
SNX17-208ENST00000493711 SLIT3O75094 1523 aa16.78■□□□□ 0.28
SNX17-208ENST00000493711 KIF24Q5T7B8 1368 aa16.77■□□□□ 0.28
SNX17-208ENST00000493711 USP54Q70EL1 1684 aa16.77■□□□□ 0.28
SNX17-208ENST00000493711 PPP2R1AP30153 589 aa16.76■□□□□ 0.27
SNX17-208ENST00000493711 TNNT2P45379 298 aaPredicted RBP16.76■□□□□ 0.27
SNX17-208ENST00000493711 CPDO75976 1380 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms