RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 SSH2Q76I76 1423 aa15.84■□□□□ 0.13
LSM2-214ENST00000493387 AKAP12Q02952 1782 aa15.83■□□□□ 0.12
LSM2-214ENST00000493387 PAK3O75914 559 aaPredicted RBP15.83■□□□□ 0.12
LSM2-214ENST00000493387 XPCQ01831 940 aaPredicted RBP15.83■□□□□ 0.12
LSM2-214ENST00000493387 CGNL1Q0VF96 1302 aa15.83■□□□□ 0.12
LSM2-214ENST00000493387 NHSL1Q5SYE7 1610 aa15.83■□□□□ 0.12
LSM2-214ENST00000493387 PER1O15534 1290 aaPredicted RBP15.82■□□□□ 0.12
LSM2-214ENST00000493387 NSD3Q9BZ95 1437 aa15.82■□□□□ 0.12
LSM2-214ENST00000493387 PXDNQ92626 1479 aa15.82■□□□□ 0.12
LSM2-214ENST00000493387 ARHGEF10O15013 1369 aa15.81■□□□□ 0.12
LSM2-214ENST00000493387 SPATA31A3Q5VYP0 1347 aa15.81■□□□□ 0.12
LSM2-214ENST00000493387 MON2Q7Z3U7 1717 aa15.81■□□□□ 0.12
LSM2-214ENST00000493387 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.81■□□□□ 0.12
LSM2-214ENST00000493387 TNS3Q68CZ2 1445 aa15.8■□□□□ 0.12
LSM2-214ENST00000493387 ABTB2Q8N961 1025 aa15.8■□□□□ 0.12
LSM2-214ENST00000493387 NSD2O96028 1365 aa15.79■□□□□ 0.12
LSM2-214ENST00000493387 NPC1L1Q9UHC9 1359 aa15.79■□□□□ 0.12
LSM2-214ENST00000493387 LMOD2Q6P5Q4 547 aa15.79■□□□□ 0.12
LSM2-214ENST00000493387 NLRP13Q86W25 1043 aa15.79■□□□□ 0.12
LSM2-214ENST00000493387 PIAS4Q8N2W9 510 aaPredicted RBP15.79■□□□□ 0.12
LSM2-214ENST00000493387 PHLPP1O60346 1717 aa15.78■□□□□ 0.12
LSM2-214ENST00000493387 FYB1O15117 783 aa15.78■□□□□ 0.12
LSM2-214ENST00000493387 ILDR1Q86SU0 546 aaPredicted RBP15.78■□□□□ 0.12
LSM2-214ENST00000493387 USP31Q70CQ4 1352 aa15.77■□□□□ 0.12
LSM2-214ENST00000493387 HSPA1LP34931 641 aa15.77■□□□□ 0.12
LSM2-214ENST00000493387 NLRP6P59044 892 aa15.77■□□□□ 0.12
LSM2-214ENST00000493387 AMER1Q5JTC6 1135 aaPredicted RBP15.77■□□□□ 0.12
LSM2-214ENST00000493387 TRPM3Q9HCF6 1732 aaPredicted RBP15.77■□□□□ 0.11
LSM2-214ENST00000493387 NRKQ7Z2Y5 1582 aa15.76■□□□□ 0.11
LSM2-214ENST00000493387 NME9Q86XW9 330 aa15.76■□□□□ 0.11
LSM2-214ENST00000493387 COG3Q96JB2 828 aa15.76■□□□□ 0.11
LSM2-214ENST00000493387 COL16A1Q07092 1604 aaPredicted RBP15.75■□□□□ 0.11
LSM2-214ENST00000493387 JCADQ9P266 1359 aa15.75■□□□□ 0.11
LSM2-214ENST00000493387 GGNBP2Q9H3C7 697 aa15.74■□□□□ 0.11
LSM2-214ENST00000493387 KCNH5Q8NCM2 988 aa15.73■□□□□ 0.11
LSM2-214ENST00000493387 PNPLA6Q8IY17 1366 aa15.73■□□□□ 0.11
LSM2-214ENST00000493387 ALS2Q96Q42 1657 aa15.73■□□□□ 0.11
LSM2-214ENST00000493387 USP19O94966 1318 aa15.72■□□□□ 0.11
LSM2-214ENST00000493387 NUTM2GQ5VZR2 741 aa15.72■□□□□ 0.11
LSM2-214ENST00000493387 MORC1Q86VD1 984 aa15.72■□□□□ 0.11
LSM2-214ENST00000493387 CC2D1BQ5T0F9 858 aaKnown RBP15.71■□□□□ 0.11
LSM2-214ENST00000493387 OVOS2A0A0J9YW53 1432 aa15.7■□□□□ 0.1
LSM2-214ENST00000493387 OVOS2Q6IE36 1432 aa15.7■□□□□ 0.1
LSM2-214ENST00000493387 HAP1P54257 671 aaPredicted RBP15.7■□□□□ 0.1
LSM2-214ENST00000493387 RALBP1Q15311 655 aa15.7■□□□□ 0.1
LSM2-214ENST00000493387 ZRANB1Q9UGI0 708 aa15.7■□□□□ 0.1
LSM2-214ENST00000493387 PIK3C2AO00443 1686 aa15.7■□□□□ 0.1
LSM2-214ENST00000493387 SPATA31A6Q5VVP1 1343 aa15.69■□□□□ 0.1
LSM2-214ENST00000493387 KIF20BQ96Q89 1820 aa15.69■□□□□ 0.1
LSM2-214ENST00000493387 GCP02774 474 aa15.69■□□□□ 0.1
LSM2-214ENST00000493387 MED1Q15648 1581 aaPredicted RBP15.69■□□□□ 0.1
LSM2-214ENST00000493387 ANP32CO43423 234 aa15.68■□□□□ 0.1
LSM2-214ENST00000493387 USP54Q70EL1 1684 aa15.67■□□□□ 0.1
LSM2-214ENST00000493387 DIEXFQ68CQ4 756 aaKnown RBP15.67■□□□□ 0.1
LSM2-214ENST00000493387 COL22A1Q8NFW1 1626 aaPredicted RBP15.67■□□□□ 0.1
LSM2-214ENST00000493387 SHPRHQ149N8 1683 aa15.67■□□□□ 0.1
LSM2-214ENST00000493387 AATKQ6ZMQ8 1374 aa15.66■□□□□ 0.1
LSM2-214ENST00000493387 CABLES1Q8TDN4 633 aa15.66■□□□□ 0.1
LSM2-214ENST00000493387 SLIT3O75094 1523 aa15.66■□□□□ 0.1
LSM2-214ENST00000493387 CNGB1Q14028 1251 aaPredicted RBP15.65■□□□□ 0.1
LSM2-214ENST00000493387 ANKRD26Q9UPS8 1709 aa15.65■□□□□ 0.1
LSM2-214ENST00000493387 PARD3Q8TEW0 1356 aa15.64■□□□□ 0.09
LSM2-214ENST00000493387 PLEKHG5O94827 1062 aa15.64■□□□□ 0.09
LSM2-214ENST00000493387 PRKRIP1Q9H875 184 aaPredicted RBP15.64■□□□□ 0.09
LSM2-214ENST00000493387 CPDO75976 1380 aa15.63■□□□□ 0.09
LSM2-214ENST00000493387 SOX12O15370 315 aa15.63■□□□□ 0.09
LSM2-214ENST00000493387 ADRA2BP18089 450 aa15.63■□□□□ 0.09
LSM2-214ENST00000493387 TNNT2P45379 298 aaPredicted RBP15.63■□□□□ 0.09
LSM2-214ENST00000493387 NUTM2BA6NNL0 878 aaPredicted RBP15.62■□□□□ 0.09
LSM2-214ENST00000493387 NUTM2EB1AL46 878 aaPredicted RBP15.62■□□□□ 0.09
LSM2-214ENST00000493387 ARHGEF25Q86VW2 580 aa15.62■□□□□ 0.09
LSM2-214ENST00000493387 NUTM2AQ8IVF1 878 aaPredicted RBP15.62■□□□□ 0.09
LSM2-214ENST00000493387 KIF24Q5T7B8 1368 aa15.62■□□□□ 0.09
LSM2-214ENST00000493387 ZC3H6P61129 1189 aaKnown RBP15.61■□□□□ 0.09
LSM2-214ENST00000493387 PRDM11Q9NQV5 511 aa15.61■□□□□ 0.09
LSM2-214ENST00000493387 MYBBP1AQ9BQG0 1328 aaKnown RBP15.61■□□□□ 0.09
LSM2-214ENST00000493387 MARF1Q9Y4F3 1742 aaKnown RBP15.6■□□□□ 0.09
LSM2-214ENST00000493387 NFAT5O94916 1531 aa15.6■□□□□ 0.09
LSM2-214ENST00000493387 PPP2R1AP30153 589 aa15.6■□□□□ 0.09
LSM2-214ENST00000493387 AMPHP49418 695 aa15.6■□□□□ 0.09
LSM2-214ENST00000493387 POLKQ9UBT6 870 aa15.6■□□□□ 0.09
LSM2-214ENST00000493387 MAP3K19Q56UN5 1328 aa15.6■□□□□ 0.09
LSM2-214ENST00000493387 PHRF1Q9P1Y6 1649 aaKnown RBP15.59■□□□□ 0.09
LSM2-214ENST00000493387 RRS1Q15050 365 aaKnown RBP15.59■□□□□ 0.09
LSM2-214ENST00000493387 CRYBG1Q9Y4K1 1723 aa15.59■□□□□ 0.09
LSM2-214ENST00000493387 RTL1A6NKG5 1358 aa15.59■□□□□ 0.09
LSM2-214ENST00000493387 KIAA0232Q92628 1395 aa15.59■□□□□ 0.09
LSM2-214ENST00000493387 ADAMTS2O95450 1211 aa15.58■□□□□ 0.08
LSM2-214ENST00000493387 MTHFSP49914 203 aa15.58■□□□□ 0.08
LSM2-214ENST00000493387 MEX3CQ5U5Q3 659 aaKnown RBP15.58■□□□□ 0.08
LSM2-214ENST00000493387 IP6K1Q92551 441 aa15.58■□□□□ 0.08
LSM2-214ENST00000493387 ABCA3Q99758 1704 aa15.57■□□□□ 0.08
LSM2-214ENST00000493387 ZBTB7CA1YPR0 619 aa15.57■□□□□ 0.08
LSM2-214ENST00000493387 FAM83GA6ND36 823 aa15.57■□□□□ 0.08
LSM2-214ENST00000493387 FBLN1P23142 703 aa15.57■□□□□ 0.08
LSM2-214ENST00000493387 CFAP53Q96M91 514 aa15.57■□□□□ 0.08
LSM2-214ENST00000493387 PPM1GO15355 546 aaPredicted RBP15.56■□□□□ 0.08
LSM2-214ENST00000493387 EMILIN1Q9Y6C2 1016 aa15.56■□□□□ 0.08
LSM2-214ENST00000493387 FLT4P35916 1363 aa15.56■□□□□ 0.08
LSM2-214ENST00000493387 SMG6Q86US8 1419 aaKnown RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms