RNA–Protein interactions for RNA: ENST00000493217.1

TSC22D4-205, Transcript of TSC22 domain family member 4, humanhuman

TSL 1 (best)

Gene TSC22D4, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-205ENST00000493217 ESF1Q9H501 851 aaKnown RBP24.39■■□□□ 1.5
TSC22D4-205ENST00000493217 COG6Q9Y2V7 657 aa24.39■■□□□ 1.5
TSC22D4-205ENST00000493217 METP08581 1390 aa24.39■■□□□ 1.5
TSC22D4-205ENST00000493217 FRAT1Q92837 279 aaPredicted RBP24.39■■□□□ 1.49
TSC22D4-205ENST00000493217 CLUAP1Q96AJ1 413 aa24.39■■□□□ 1.49
TSC22D4-205ENST00000493217 DIAPH1O60610 1272 aaKnown RBP24.38■■□□□ 1.49
TSC22D4-205ENST00000493217 IGHDP01880 384 aa24.37■■□□□ 1.49
TSC22D4-205ENST00000493217 TRIM35Q9UPQ4 493 aa24.37■■□□□ 1.49
TSC22D4-205ENST00000493217 WASLO00401 505 aaPredicted RBP24.36■■□□□ 1.49
TSC22D4-205ENST00000493217 MAPK8IP3Q9UPT6 1336 aa24.35■■□□□ 1.49
TSC22D4-205ENST00000493217 AAMPQ13685 434 aa24.34■■□□□ 1.49
TSC22D4-205ENST00000493217 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.34■■□□□ 1.49
TSC22D4-205ENST00000493217 CPSF1Q10570 1443 aaKnown RBP24.34■■□□□ 1.49
TSC22D4-205ENST00000493217 CT47B1P0C2W7 299 aaPredicted RBP24.34■■□□□ 1.49
TSC22D4-205ENST00000493217 HDGFP51858 240 aaKnown RBP24.34■■□□□ 1.49
TSC22D4-205ENST00000493217 SIRT1Q96EB6 747 aa24.33■■□□□ 1.49
TSC22D4-205ENST00000493217 RLBP1P12271 317 aa24.33■■□□□ 1.48
TSC22D4-205ENST00000493217 BCL2L13Q9BXK5 485 aa24.33■■□□□ 1.48
TSC22D4-205ENST00000493217 TECPR2O15040 1411 aa24.32■■□□□ 1.48
TSC22D4-205ENST00000493217 FAM135BQ49AJ0 1406 aa24.32■■□□□ 1.48
TSC22D4-205ENST00000493217 FAM161AQ3B820 660 aa24.32■■□□□ 1.48
TSC22D4-205ENST00000493217 PNNQ9H307 717 aaKnown RBP24.32■■□□□ 1.48
TSC22D4-205ENST00000493217 POLKQ9UBT6 870 aa24.32■■□□□ 1.48
TSC22D4-205ENST00000493217 CDC42BPGQ6DT37 1551 aa24.32■■□□□ 1.48
TSC22D4-205ENST00000493217 TNRQ92752 1358 aa24.32■■□□□ 1.48
TSC22D4-205ENST00000493217 C8orf34Q49A92 452 aa24.31■■□□□ 1.48
TSC22D4-205ENST00000493217 TXNDC2Q86VQ3 553 aa24.31■■□□□ 1.48
TSC22D4-205ENST00000493217 IL16Q14005 1332 aa24.31■■□□□ 1.48
TSC22D4-205ENST00000493217 PPIP5K1Q6PFW1 1433 aa24.31■■□□□ 1.48
TSC22D4-205ENST00000493217 KNDC1Q76NI1 1749 aa24.3■■□□□ 1.48
TSC22D4-205ENST00000493217 TSR2Q969E8 191 aaKnown RBP24.3■■□□□ 1.48
TSC22D4-205ENST00000493217 EDC4Q6P2E9 1401 aaKnown RBP24.3■■□□□ 1.48
TSC22D4-205ENST00000493217 FCHSD2O94868 740 aa24.3■■□□□ 1.48
TSC22D4-205ENST00000493217 RGS3P49796 1198 aa24.3■■□□□ 1.48
TSC22D4-205ENST00000493217 TNNQ9UQP3 1299 aa24.3■■□□□ 1.48
TSC22D4-205ENST00000493217 RIPK4P57078 832 aa24.29■■□□□ 1.48
TSC22D4-205ENST00000493217 FBLN1P23142 703 aa24.28■■□□□ 1.48
TSC22D4-205ENST00000493217 TMEM2Q9UHN6 1383 aa24.28■■□□□ 1.48
TSC22D4-205ENST00000493217 EXOSC9Q06265 439 aaKnown RBP24.26■■□□□ 1.47
TSC22D4-205ENST00000493217 NUDT16Q96DE0 195 aaKnown RBP24.26■■□□□ 1.47
TSC22D4-205ENST00000493217 CPS1P31327 1500 aa24.26■■□□□ 1.47
TSC22D4-205ENST00000493217 UBR1Q8IWV7 1749 aa24.26■■□□□ 1.47
TSC22D4-205ENST00000493217 MAP2P11137 1827 aaKnown RBP24.25■■□□□ 1.47
TSC22D4-205ENST00000493217 CCDC61Q9Y6R9 512 aa24.25■■□□□ 1.47
TSC22D4-205ENST00000493217 RSPH6AQ9H0K4 717 aa24.25■■□□□ 1.47
TSC22D4-205ENST00000493217 LRRC7Q96NW7 1537 aa24.24■■□□□ 1.47
TSC22D4-205ENST00000493217 PPM1GO15355 546 aaPredicted RBP24.24■■□□□ 1.47
TSC22D4-205ENST00000493217 ZKSCAN2Q63HK3 967 aa24.24■■□□□ 1.47
TSC22D4-205ENST00000493217 PMFBP1Q8TBY8 1022 aa24.24■■□□□ 1.47
TSC22D4-205ENST00000493217 PCDHB15Q9Y5E8 787 aa24.24■■□□□ 1.47
TSC22D4-205ENST00000493217 NME9Q86XW9 330 aa24.22■■□□□ 1.47
TSC22D4-205ENST00000493217 AATKQ6ZMQ8 1374 aa24.22■■□□□ 1.47
TSC22D4-205ENST00000493217 MVPQ14764 893 aaKnown RBP24.22■■□□□ 1.47
TSC22D4-205ENST00000493217 NCKAP5LQ9HCH0 1330 aa24.21■■□□□ 1.47
TSC22D4-205ENST00000493217 PRKAR2BP31323 418 aa24.21■■□□□ 1.47
TSC22D4-205ENST00000493217 DDRGK1Q96HY6 314 aa24.21■■□□□ 1.47
TSC22D4-205ENST00000493217 EMILIN1Q9Y6C2 1016 aa24.2■■□□□ 1.47
TSC22D4-205ENST00000493217 MON2Q7Z3U7 1717 aa24.2■■□□□ 1.46
TSC22D4-205ENST00000493217 ADAMTS13Q76LX8 1427 aa24.2■■□□□ 1.46
TSC22D4-205ENST00000493217 DZIP1LQ8IYY4 767 aaKnown RBP24.2■■□□□ 1.46
TSC22D4-205ENST00000493217 SSH1Q8WYL5 1049 aa24.2■■□□□ 1.46
TSC22D4-205ENST00000493217 SMC4Q9NTJ3 1288 aa24.2■■□□□ 1.46
TSC22D4-205ENST00000493217 NBR1Q14596 966 aa24.19■■□□□ 1.46
TSC22D4-205ENST00000493217 ZRANB1Q9UGI0 708 aa24.19■■□□□ 1.46
TSC22D4-205ENST00000493217 CDK12Q9NYV4 1490 aaPredicted RBP24.18■■□□□ 1.46
TSC22D4-205ENST00000493217 ROBO2Q9HCK4 1378 aa24.18■■□□□ 1.46
TSC22D4-205ENST00000493217 IL13P35225 146 aa24.18■■□□□ 1.46
TSC22D4-205ENST00000493217 FTSJ3Q8IY81 847 aaKnown RBP24.17■■□□□ 1.46
TSC22D4-205ENST00000493217 ZNF692Q9BU19 519 aaPredicted RBP24.17■■□□□ 1.46
TSC22D4-205ENST00000493217 PRR36Q9H6K5 1346 aa24.17■■□□□ 1.46
TSC22D4-205ENST00000493217 NEFMP07197 916 aa24.17■■□□□ 1.46
TSC22D4-205ENST00000493217 TRIM27P14373 513 aa24.17■■□□□ 1.46
TSC22D4-205ENST00000493217 AKAP12Q02952 1782 aa24.16■■□□□ 1.46
TSC22D4-205ENST00000493217 COG3Q96JB2 828 aa24.16■■□□□ 1.46
TSC22D4-205ENST00000493217 PHACTR3Q96KR7 559 aa24.16■■□□□ 1.46
TSC22D4-205ENST00000493217 C3P01024 1663 aa24.15■■□□□ 1.46
TSC22D4-205ENST00000493217 HMOX1P09601 288 aa24.15■■□□□ 1.46
TSC22D4-205ENST00000493217 LTKP29376 864 aa24.15■■□□□ 1.46
TSC22D4-205ENST00000493217 PLEKHG1Q9ULL1 1385 aa24.15■■□□□ 1.46
TSC22D4-205ENST00000493217 NFE2L2Q16236 605 aa24.14■■□□□ 1.46
TSC22D4-205ENST00000493217 ATF7IPQ6VMQ6 1270 aa24.14■■□□□ 1.46
TSC22D4-205ENST00000493217 RWDD1Q9H446 243 aaPredicted RBP24.14■■□□□ 1.46
TSC22D4-205ENST00000493217 ITSN1Q15811 1721 aa24.12■■□□□ 1.45
TSC22D4-205ENST00000493217 NOB1Q9ULX3 412 aaKnown RBP24.12■■□□□ 1.45
TSC22D4-205ENST00000493217 VIRMAQ69YN4 1812 aaKnown RBP24.11■■□□□ 1.45
TSC22D4-205ENST00000493217 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.11■■□□□ 1.45
TSC22D4-205ENST00000493217 RRS1Q15050 365 aaKnown RBP24.11■■□□□ 1.45
TSC22D4-205ENST00000493217 ALDH1L2Q3SY69 923 aa24.11■■□□□ 1.45
TSC22D4-205ENST00000493217 KIF16BQ96L93 1317 aa24.09■■□□□ 1.45
TSC22D4-205ENST00000493217 DDX19BQ9UMR2 479 aa24.09■■□□□ 1.45
TSC22D4-205ENST00000493217 ZNF428Q96B54 188 aa24.09■■□□□ 1.45
TSC22D4-205ENST00000493217 PDZRN3Q9UPQ7 1066 aa24.09■■□□□ 1.45
TSC22D4-205ENST00000493217 CEBPAP49715 358 aaPredicted RBP24.08■■□□□ 1.45
TSC22D4-205ENST00000493217 CALD1Q05682 793 aaKnown RBP24.07■■□□□ 1.44
TSC22D4-205ENST00000493217 IPO8O15397 1037 aaKnown RBP24.07■■□□□ 1.44
TSC22D4-205ENST00000493217 BRPF1P55201 1214 aaPredicted RBP24.07■■□□□ 1.44
TSC22D4-205ENST00000493217 PLEKHG3A1L390 1219 aa24.06■■□□□ 1.44
TSC22D4-205ENST00000493217 ITPRIPQ8IWB1 547 aa24.06■■□□□ 1.44
TSC22D4-205ENST00000493217 TOPAZ1Q8N9V7 1692 aa24.05■■□□□ 1.44
TSC22D4-205ENST00000493217 TTC21BQ7Z4L5 1316 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms