RNA–Protein interactions for RNA: ENST00000491974.1

SNHG28-202, Transcript of small nucleolar RNA host gene 28, humanhuman

TSL 2

Gene SNHG28, Length 1,064 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-202ENST00000491974 NHSL1Q5SYE7 1610 aa22.81■■□□□ 1.24
SNHG28-202ENST00000491974 SSH2Q76I76 1423 aa22.81■■□□□ 1.24
SNHG28-202ENST00000491974 LMOD2Q6P5Q4 547 aa22.8■■□□□ 1.24
SNHG28-202ENST00000491974 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.79■■□□□ 1.24
SNHG28-202ENST00000491974 EDC4Q6P2E9 1401 aaKnown RBP22.79■■□□□ 1.24
SNHG28-202ENST00000491974 TTC21AQ8NDW8 1320 aa22.79■■□□□ 1.24
SNHG28-202ENST00000491974 TNS3Q68CZ2 1445 aa22.78■■□□□ 1.24
SNHG28-202ENST00000491974 ABTB2Q8N961 1025 aa22.78■■□□□ 1.24
SNHG28-202ENST00000491974 PHLPP1O60346 1717 aa22.77■■□□□ 1.23
SNHG28-202ENST00000491974 ARHGEF10O15013 1369 aa22.76■■□□□ 1.23
SNHG28-202ENST00000491974 JCADQ9P266 1359 aa22.76■■□□□ 1.23
SNHG28-202ENST00000491974 COL16A1Q07092 1604 aaPredicted RBP22.76■■□□□ 1.23
SNHG28-202ENST00000491974 MYOM1P52179 1685 aa22.74■■□□□ 1.23
SNHG28-202ENST00000491974 NSD3Q9BZ95 1437 aa22.74■■□□□ 1.23
SNHG28-202ENST00000491974 KNSTRNQ9Y448 316 aa22.74■■□□□ 1.23
SNHG28-202ENST00000491974 PNPLA6Q8IY17 1366 aa22.74■■□□□ 1.23
SNHG28-202ENST00000491974 NLRP6P59044 892 aa22.73■■□□□ 1.23
SNHG28-202ENST00000491974 DDX10Q13206 875 aaKnown RBP22.73■■□□□ 1.23
SNHG28-202ENST00000491974 NUTM2GQ5VZR2 741 aa22.73■■□□□ 1.23
SNHG28-202ENST00000491974 NLRP13Q86W25 1043 aa22.73■■□□□ 1.23
SNHG28-202ENST00000491974 NME9Q86XW9 330 aa22.73■■□□□ 1.23
SNHG28-202ENST00000491974 PER1O15534 1290 aaPredicted RBP22.72■■□□□ 1.23
SNHG28-202ENST00000491974 FYB1O15117 783 aa22.71■■□□□ 1.23
SNHG28-202ENST00000491974 CGNL1Q0VF96 1302 aa22.71■■□□□ 1.23
SNHG28-202ENST00000491974 AKAP12Q02952 1782 aa22.71■■□□□ 1.23
SNHG28-202ENST00000491974 TRPM3Q9HCF6 1732 aaPredicted RBP22.7■■□□□ 1.22
SNHG28-202ENST00000491974 ZRANB1Q9UGI0 708 aa22.69■■□□□ 1.22
SNHG28-202ENST00000491974 MON2Q7Z3U7 1717 aa22.68■■□□□ 1.22
SNHG28-202ENST00000491974 USP31Q70CQ4 1352 aa22.68■■□□□ 1.22
SNHG28-202ENST00000491974 PLEKHG5O94827 1062 aa22.68■■□□□ 1.22
SNHG28-202ENST00000491974 SPATA31A6Q5VVP1 1343 aa22.67■■□□□ 1.22
SNHG28-202ENST00000491974 CABLES1Q8TDN4 633 aa22.67■■□□□ 1.22
SNHG28-202ENST00000491974 COG3Q96JB2 828 aa22.67■■□□□ 1.22
SNHG28-202ENST00000491974 GGNBP2Q9H3C7 697 aa22.67■■□□□ 1.22
SNHG28-202ENST00000491974 USP19O94966 1318 aa22.65■■□□□ 1.22
SNHG28-202ENST00000491974 NRKQ7Z2Y5 1582 aa22.65■■□□□ 1.22
SNHG28-202ENST00000491974 HAP1P54257 671 aaPredicted RBP22.65■■□□□ 1.22
SNHG28-202ENST00000491974 AMER1Q5JTC6 1135 aaPredicted RBP22.65■■□□□ 1.22
SNHG28-202ENST00000491974 NUTM2BA6NNL0 878 aaPredicted RBP22.64■■□□□ 1.21
SNHG28-202ENST00000491974 NUTM2EB1AL46 878 aaPredicted RBP22.64■■□□□ 1.21
SNHG28-202ENST00000491974 NUTM2AQ8IVF1 878 aaPredicted RBP22.64■■□□□ 1.21
SNHG28-202ENST00000491974 ALS2Q96Q42 1657 aa22.63■■□□□ 1.21
SNHG28-202ENST00000491974 GCP02774 474 aa22.63■■□□□ 1.21
SNHG28-202ENST00000491974 KCNH5Q8NCM2 988 aa22.62■■□□□ 1.21
SNHG28-202ENST00000491974 NSD2O96028 1365 aa22.62■■□□□ 1.21
SNHG28-202ENST00000491974 OVOS2A0A0J9YW53 1432 aa22.6■■□□□ 1.21
SNHG28-202ENST00000491974 OVOS2Q6IE36 1432 aa22.6■■□□□ 1.21
SNHG28-202ENST00000491974 PIK3C2AO00443 1686 aa22.59■■□□□ 1.21
SNHG28-202ENST00000491974 NPC1L1Q9UHC9 1359 aa22.59■■□□□ 1.21
SNHG28-202ENST00000491974 SHPRHQ149N8 1683 aa22.58■■□□□ 1.21
SNHG28-202ENST00000491974 COL22A1Q8NFW1 1626 aaPredicted RBP22.58■■□□□ 1.21
SNHG28-202ENST00000491974 SOX12O15370 315 aa22.58■■□□□ 1.21
SNHG28-202ENST00000491974 ADAMTS2O95450 1211 aa22.58■■□□□ 1.21
SNHG28-202ENST00000491974 CC2D1BQ5T0F9 858 aaKnown RBP22.58■■□□□ 1.21
SNHG28-202ENST00000491974 MORC1Q86VD1 984 aa22.58■■□□□ 1.21
SNHG28-202ENST00000491974 MED1Q15648 1581 aaPredicted RBP22.58■■□□□ 1.2
SNHG28-202ENST00000491974 ZC3H6P61129 1189 aaKnown RBP22.56■■□□□ 1.2
SNHG28-202ENST00000491974 CNGB1Q14028 1251 aaPredicted RBP22.55■■□□□ 1.2
SNHG28-202ENST00000491974 SLIT3O75094 1523 aa22.54■■□□□ 1.2
SNHG28-202ENST00000491974 MEX3CQ5U5Q3 659 aaKnown RBP22.54■■□□□ 1.2
SNHG28-202ENST00000491974 ARHGEF25Q86VW2 580 aa22.52■■□□□ 1.2
SNHG28-202ENST00000491974 PRDM11Q9NQV5 511 aa22.52■■□□□ 1.2
SNHG28-202ENST00000491974 CPDO75976 1380 aa22.51■■□□□ 1.19
SNHG28-202ENST00000491974 KIAA0232Q92628 1395 aa22.51■■□□□ 1.19
SNHG28-202ENST00000491974 LRP6O75581 1613 aa22.51■■□□□ 1.19
SNHG28-202ENST00000491974 FAM83GA6ND36 823 aa22.51■■□□□ 1.19
SNHG28-202ENST00000491974 FBLN1P23142 703 aa22.51■■□□□ 1.19
SNHG28-202ENST00000491974 TNNT2P45379 298 aaPredicted RBP22.51■■□□□ 1.19
SNHG28-202ENST00000491974 ZBTB7CA1YPR0 619 aa22.5■■□□□ 1.19
SNHG28-202ENST00000491974 NGLY1Q96IV0 654 aa22.49■■□□□ 1.19
SNHG28-202ENST00000491974 C8orf37Q96NL8 207 aa22.49■■□□□ 1.19
SNHG28-202ENST00000491974 AATKQ6ZMQ8 1374 aa22.49■■□□□ 1.19
SNHG28-202ENST00000491974 CHRNA2Q15822 529 aa22.48■■□□□ 1.19
SNHG28-202ENST00000491974 USP54Q70EL1 1684 aa22.48■■□□□ 1.19
SNHG28-202ENST00000491974 RRS1Q15050 365 aaKnown RBP22.47■■□□□ 1.19
SNHG28-202ENST00000491974 MAP3K19Q56UN5 1328 aa22.47■■□□□ 1.19
SNHG28-202ENST00000491974 NFAT5O94916 1531 aa22.47■■□□□ 1.19
SNHG28-202ENST00000491974 KIF20BQ96Q89 1820 aa22.46■■□□□ 1.19
SNHG28-202ENST00000491974 AMPHP49418 695 aa22.45■■□□□ 1.18
SNHG28-202ENST00000491974 POLKQ9UBT6 870 aa22.45■■□□□ 1.18
SNHG28-202ENST00000491974 PHRF1Q9P1Y6 1649 aaKnown RBP22.45■■□□□ 1.18
SNHG28-202ENST00000491974 MARF1Q9Y4F3 1742 aaKnown RBP22.45■■□□□ 1.18
SNHG28-202ENST00000491974 CRYBG1Q9Y4K1 1723 aa22.45■■□□□ 1.18
SNHG28-202ENST00000491974 RALBP1Q15311 655 aa22.44■■□□□ 1.18
SNHG28-202ENST00000491974 FNBP4Q8N3X1 1017 aaPredicted RBP22.44■■□□□ 1.18
SNHG28-202ENST00000491974 IP6K1Q92551 441 aa22.43■■□□□ 1.18
SNHG28-202ENST00000491974 EMILIN1Q9Y6C2 1016 aa22.43■■□□□ 1.18
SNHG28-202ENST00000491974 PARD3Q8TEW0 1356 aa22.42■■□□□ 1.18
SNHG28-202ENST00000491974 BTG4Q9NY30 223 aa22.42■■□□□ 1.18
SNHG28-202ENST00000491974 ABCA3Q99758 1704 aa22.42■■□□□ 1.18
SNHG28-202ENST00000491974 PPM1GO15355 546 aaPredicted RBP22.41■■□□□ 1.18
SNHG28-202ENST00000491974 AXIN2Q9Y2T1 843 aa22.41■■□□□ 1.18
SNHG28-202ENST00000491974 KIF24Q5T7B8 1368 aa22.4■■□□□ 1.18
SNHG28-202ENST00000491974 AFF2P51816 1311 aa22.4■■□□□ 1.18
SNHG28-202ENST00000491974 HOXC9P31274 260 aa22.4■■□□□ 1.18
SNHG28-202ENST00000491974 PRKRIP1Q9H875 184 aaPredicted RBP22.4■■□□□ 1.18
SNHG28-202ENST00000491974 PPP2R1AP30153 589 aa22.39■■□□□ 1.17
SNHG28-202ENST00000491974 USP21Q9UK80 565 aa22.39■■□□□ 1.17
SNHG28-202ENST00000491974 RTL1A6NKG5 1358 aa22.38■■□□□ 1.17
SNHG28-202ENST00000491974 ANP32CO43423 234 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms