RNA–Protein interactions for RNA: ENST00000490393.1

RIPPLY3-203, Transcript of ripply transcriptional repressor 3, humanhuman

TSL 1 (best)

Gene RIPPLY3, Length 1,885 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-203ENST00000490393 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.95■□□□□ 0.46
RIPPLY3-203ENST00000490393 PPP4R2Q9NY27 417 aa17.95■□□□□ 0.46
RIPPLY3-203ENST00000490393 ITSN1Q15811 1721 aa17.94■□□□□ 0.46
RIPPLY3-203ENST00000490393 NCKAP5LQ9HCH0 1330 aa17.94■□□□□ 0.46
RIPPLY3-203ENST00000490393 AATKQ6ZMQ8 1374 aa17.94■□□□□ 0.46
RIPPLY3-203ENST00000490393 IRX6P78412 446 aaPredicted RBP17.94■□□□□ 0.46
RIPPLY3-203ENST00000490393 SLFN5Q08AF3 891 aa17.94■□□□□ 0.46
RIPPLY3-203ENST00000490393 DUSP27Q5VZP5 1158 aa17.93■□□□□ 0.46
RIPPLY3-203ENST00000490393 CHD2O14647 1828 aaKnown RBP17.93■□□□□ 0.46
RIPPLY3-203ENST00000490393 KCNA6P17658 529 aa17.92■□□□□ 0.46
RIPPLY3-203ENST00000490393 PHF23Q9BUL5 403 aaPredicted RBP17.92■□□□□ 0.46
RIPPLY3-203ENST00000490393 POLKQ9UBT6 870 aa17.92■□□□□ 0.46
RIPPLY3-203ENST00000490393 CCDC27Q2M243 656 aa17.91■□□□□ 0.46
RIPPLY3-203ENST00000490393 ACEP12821 1306 aa17.91■□□□□ 0.46
RIPPLY3-203ENST00000490393 ANKARQ7Z5J8 1434 aa17.9■□□□□ 0.46
RIPPLY3-203ENST00000490393 IQSEC2Q5JU85 1478 aa17.9■□□□□ 0.46
RIPPLY3-203ENST00000490393 U2AF1L5P0DN76 240 aaPredicted RBP17.9■□□□□ 0.46
RIPPLY3-203ENST00000490393 U2AF1Q01081 240 aaKnown RBP eCLIP17.9■□□□□ 0.46
RIPPLY3-203ENST00000490393 NME9Q86XW9 330 aa17.9■□□□□ 0.46
RIPPLY3-203ENST00000490393 E9PSI1 815 aa17.89■□□□□ 0.45
RIPPLY3-203ENST00000490393 RRP1P56182 461 aaKnown RBP17.89■□□□□ 0.45
RIPPLY3-203ENST00000490393 TCP11L2Q8N4U5 519 aa17.89■□□□□ 0.45
RIPPLY3-203ENST00000490393 COG3Q96JB2 828 aa17.89■□□□□ 0.45
RIPPLY3-203ENST00000490393 TTC21BQ7Z4L5 1316 aa17.89■□□□□ 0.45
RIPPLY3-203ENST00000490393 SSH2Q76I76 1423 aa17.89■□□□□ 0.45
RIPPLY3-203ENST00000490393 MAP2P11137 1827 aaKnown RBP17.89■□□□□ 0.45
RIPPLY3-203ENST00000490393 DIAPH1O60610 1272 aaKnown RBP17.88■□□□□ 0.45
RIPPLY3-203ENST00000490393 WWC1Q8IX03 1113 aa17.88■□□□□ 0.45
RIPPLY3-203ENST00000490393 USP6P35125 1406 aa17.88■□□□□ 0.45
RIPPLY3-203ENST00000490393 NRKQ7Z2Y5 1582 aa17.88■□□□□ 0.45
RIPPLY3-203ENST00000490393 PNNQ9H307 717 aaKnown RBP17.88■□□□□ 0.45
RIPPLY3-203ENST00000490393 NPHP4O75161 1426 aaPredicted RBP17.88■□□□□ 0.45
RIPPLY3-203ENST00000490393 WDR63Q8IWG1 891 aa17.87■□□□□ 0.45
RIPPLY3-203ENST00000490393 PLEKHF1Q96S99 279 aa17.87■□□□□ 0.45
RIPPLY3-203ENST00000490393 NKTRP30414 1462 aaKnown RBP17.86■□□□□ 0.45
RIPPLY3-203ENST00000490393 TTC21AQ8NDW8 1320 aa17.85■□□□□ 0.45
RIPPLY3-203ENST00000490393 ZRANB1Q9UGI0 708 aa17.85■□□□□ 0.45
RIPPLY3-203ENST00000490393 FCHSD2O94868 740 aa17.84■□□□□ 0.45
RIPPLY3-203ENST00000490393 SPINK5Q9NQ38 1064 aaPredicted RBP17.84■□□□□ 0.45
RIPPLY3-203ENST00000490393 CDK12Q9NYV4 1490 aaPredicted RBP17.83■□□□□ 0.45
RIPPLY3-203ENST00000490393 FMN2Q9NZ56 1722 aa17.83■□□□□ 0.45
RIPPLY3-203ENST00000490393 NUTM2FA1L443 756 aa17.83■□□□□ 0.44
RIPPLY3-203ENST00000490393 U2SURPO15042 1029 aaKnown RBP17.83■□□□□ 0.44
RIPPLY3-203ENST00000490393 OVOS2A0A0J9YW53 1432 aa17.83■□□□□ 0.44
RIPPLY3-203ENST00000490393 OVOS2Q6IE36 1432 aa17.83■□□□□ 0.44
RIPPLY3-203ENST00000490393 USP31Q70CQ4 1352 aa17.82■□□□□ 0.44
RIPPLY3-203ENST00000490393 RGPD8O14715 1765 aaPredicted RBP17.82■□□□□ 0.44
RIPPLY3-203ENST00000490393 FBLN1P23142 703 aa17.81■□□□□ 0.44
RIPPLY3-203ENST00000490393 IL13P35225 146 aa17.8■□□□□ 0.44
RIPPLY3-203ENST00000490393 DMRT2Q9Y5R5 561 aa17.8■□□□□ 0.44
RIPPLY3-203ENST00000490393 EMILIN1Q9Y6C2 1016 aa17.8■□□□□ 0.44
RIPPLY3-203ENST00000490393 NGDNQ8NEJ9 315 aaKnown RBP17.8■□□□□ 0.44
RIPPLY3-203ENST00000490393 PMFBP1Q8TBY8 1022 aa17.8■□□□□ 0.44
RIPPLY3-203ENST00000490393 TMPOP42166 694 aaKnown RBP17.79■□□□□ 0.44
RIPPLY3-203ENST00000490393 NALCNQ8IZF0 1738 aa17.78■□□□□ 0.44
RIPPLY3-203ENST00000490393 RRP7AQ9Y3A4 280 aaKnown RBP17.78■□□□□ 0.44
RIPPLY3-203ENST00000490393 PPM1GO15355 546 aaPredicted RBP17.78■□□□□ 0.44
RIPPLY3-203ENST00000490393 NEUROD2Q15784 382 aa17.78■□□□□ 0.44
RIPPLY3-203ENST00000490393 NWD1Q149M9 1564 aa17.77■□□□□ 0.44
RIPPLY3-203ENST00000490393 ADGRL3Q9HAR2 1447 aa17.77■□□□□ 0.44
RIPPLY3-203ENST00000490393 MAPK8IP3Q9UPT6 1336 aa17.77■□□□□ 0.44
RIPPLY3-203ENST00000490393 RSPH6AQ9H0K4 717 aa17.77■□□□□ 0.43
RIPPLY3-203ENST00000490393 RRS1Q15050 365 aaKnown RBP17.75■□□□□ 0.43
RIPPLY3-203ENST00000490393 B4GALNT3Q6L9W6 998 aa17.75■□□□□ 0.43
RIPPLY3-203ENST00000490393 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.75■□□□□ 0.43
RIPPLY3-203ENST00000490393 IL16Q14005 1332 aa17.75■□□□□ 0.43
RIPPLY3-203ENST00000490393 TRIM35Q9UPQ4 493 aa17.74■□□□□ 0.43
RIPPLY3-203ENST00000490393 MYH16Q9H6N6 1097 aa17.73■□□□□ 0.43
RIPPLY3-203ENST00000490393 PHF8Q9UPP1 1060 aa17.73■□□□□ 0.43
RIPPLY3-203ENST00000490393 USP54Q70EL1 1684 aa17.72■□□□□ 0.43
RIPPLY3-203ENST00000490393 LRRC7Q96NW7 1537 aa17.72■□□□□ 0.43
RIPPLY3-203ENST00000490393 NEFMP07197 916 aa17.72■□□□□ 0.43
RIPPLY3-203ENST00000490393 EXOC6Q8TAG9 804 aa17.71■□□□□ 0.43
RIPPLY3-203ENST00000490393 PLIN1O60240 522 aa17.71■□□□□ 0.43
RIPPLY3-203ENST00000490393 PRKAR2BP31323 418 aa17.71■□□□□ 0.43
RIPPLY3-203ENST00000490393 RIPK4P57078 832 aa17.71■□□□□ 0.43
RIPPLY3-203ENST00000490393 CCDC136Q96JN2 1154 aa17.7■□□□□ 0.42
RIPPLY3-203ENST00000490393 PIK3C2AO00443 1686 aa17.7■□□□□ 0.42
RIPPLY3-203ENST00000490393 CT47B1P0C2W7 299 aaPredicted RBP17.69■□□□□ 0.42
RIPPLY3-203ENST00000490393 NFE2L2Q16236 605 aa17.69■□□□□ 0.42
RIPPLY3-203ENST00000490393 KIF24Q5T7B8 1368 aa17.69■□□□□ 0.42
RIPPLY3-203ENST00000490393 EIF4A2Q14240 407 aaKnown RBP17.68■□□□□ 0.42
RIPPLY3-203ENST00000490393 NCOA3Q9Y6Q9 1424 aa17.67■□□□□ 0.42
RIPPLY3-203ENST00000490393 NLRP6P59044 892 aa17.67■□□□□ 0.42
RIPPLY3-203ENST00000490393 PROSER2Q86WR7 435 aaPredicted RBP17.67■□□□□ 0.42
RIPPLY3-203ENST00000490393 TSHZ2Q9NRE2 1034 aa17.67■□□□□ 0.42
RIPPLY3-203ENST00000490393 PEAK1Q9H792 1746 aa17.67■□□□□ 0.42
RIPPLY3-203ENST00000490393 SBNO1A3KN83 1393 aa17.67■□□□□ 0.42
RIPPLY3-203ENST00000490393 MAP3K19Q56UN5 1328 aa17.67■□□□□ 0.42
RIPPLY3-203ENST00000490393 HMOX1P09601 288 aa17.67■□□□□ 0.42
RIPPLY3-203ENST00000490393 RBM33Q96EV2 1170 aaKnown RBP17.67■□□□□ 0.42
RIPPLY3-203ENST00000490393 PHACTR3Q96KR7 559 aa17.67■□□□□ 0.42
RIPPLY3-203ENST00000490393 C19orf44Q9H6X5 657 aa17.66■□□□□ 0.42
RIPPLY3-203ENST00000490393 BCAR3O75815 825 aa17.65■□□□□ 0.42
RIPPLY3-203ENST00000490393 RARSP54136 660 aaKnown RBP17.65■□□□□ 0.42
RIPPLY3-203ENST00000490393 CRBNQ96SW2 442 aa17.65■□□□□ 0.42
RIPPLY3-203ENST00000490393 FLT4P35916 1363 aa17.65■□□□□ 0.42
RIPPLY3-203ENST00000490393 MARF1Q9Y4F3 1742 aaKnown RBP17.65■□□□□ 0.42
RIPPLY3-203ENST00000490393 HSP90AB2PQ58FF8 381 aa17.65■□□□□ 0.42
RIPPLY3-203ENST00000490393 ESCO1Q5FWF5 840 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms