RNA–Protein interactions for RNA: ENST00000490077.5

TNXB-206, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,756 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-206ENST00000490077 FTSJ3Q8IY81 847 aaKnown RBP16.98■□□□□ 0.31
TNXB-206ENST00000490077 TSPOAP1O95153 1857 aa16.98■□□□□ 0.31
TNXB-206ENST00000490077 MVPQ14764 893 aaKnown RBP16.98■□□□□ 0.31
TNXB-206ENST00000490077 LMTK2Q8IWU2 1503 aa16.98■□□□□ 0.31
TNXB-206ENST00000490077 PPLO60437 1756 aa16.97■□□□□ 0.31
TNXB-206ENST00000490077 SBNO2Q9Y2G9 1366 aa16.97■□□□□ 0.31
TNXB-206ENST00000490077 WDR63Q8IWG1 891 aa16.97■□□□□ 0.31
TNXB-206ENST00000490077 DZIP1LQ8IYY4 767 aaKnown RBP16.97■□□□□ 0.31
TNXB-206ENST00000490077 CFAP53Q96M91 514 aa16.97■□□□□ 0.31
TNXB-206ENST00000490077 TBC1D2Q9BYX2 928 aa16.97■□□□□ 0.31
TNXB-206ENST00000490077 KIAA1210Q9ULL0 1709 aa16.97■□□□□ 0.31
TNXB-206ENST00000490077 RRS1Q15050 365 aaKnown RBP16.97■□□□□ 0.31
TNXB-206ENST00000490077 KRT24Q2M2I5 525 aa16.97■□□□□ 0.31
TNXB-206ENST00000490077 ANKRD36BQ8N2N9 1353 aa16.97■□□□□ 0.31
TNXB-206ENST00000490077 SOX12O15370 315 aa16.96■□□□□ 0.31
TNXB-206ENST00000490077 PLPPR3Q6T4P5 718 aa16.96■□□□□ 0.31
TNXB-206ENST00000490077 PRKAR2BP31323 418 aa16.95■□□□□ 0.3
TNXB-206ENST00000490077 LNPKQ9C0E8 428 aa16.95■□□□□ 0.3
TNXB-206ENST00000490077 NME9Q86XW9 330 aa16.95■□□□□ 0.3
TNXB-206ENST00000490077 MYO5BQ9ULV0 1848 aa16.95■□□□□ 0.3
TNXB-206ENST00000490077 ZKSCAN2Q63HK3 967 aa16.94■□□□□ 0.3
TNXB-206ENST00000490077 GZF1Q9H116 711 aaPredicted RBP16.94■□□□□ 0.3
TNXB-206ENST00000490077 CD163L1Q9NR16 1453 aa16.94■□□□□ 0.3
TNXB-206ENST00000490077 NEXMIFQ5QGS0 1516 aa16.93■□□□□ 0.3
TNXB-206ENST00000490077 FOXD4L1Q9NU39 408 aa16.93■□□□□ 0.3
TNXB-206ENST00000490077 POLKQ9UBT6 870 aa16.93■□□□□ 0.3
TNXB-206ENST00000490077 STAG3Q9UJ98 1225 aa16.93■□□□□ 0.3
TNXB-206ENST00000490077 TXNDC2Q86VQ3 553 aa16.92■□□□□ 0.3
TNXB-206ENST00000490077 ZC3H13Q5T200 1668 aaKnown RBP16.92■□□□□ 0.3
TNXB-206ENST00000490077 MYO3AQ8NEV4 1616 aa16.91■□□□□ 0.3
TNXB-206ENST00000490077 MYH16Q9H6N6 1097 aa16.91■□□□□ 0.3
TNXB-206ENST00000490077 USP35Q9P2H5 1018 aa16.91■□□□□ 0.3
TNXB-206ENST00000490077 ANTXR1Q9H6X2 564 aa16.91■□□□□ 0.3
TNXB-206ENST00000490077 DIAPH1O60610 1272 aaKnown RBP16.9■□□□□ 0.3
TNXB-206ENST00000490077 TBC1D32Q96NH3 1257 aa16.9■□□□□ 0.3
TNXB-206ENST00000490077 MAPK8IP3Q9UPT6 1336 aa16.9■□□□□ 0.3
TNXB-206ENST00000490077 ARHGEF28Q8N1W1 1705 aaKnown RBP16.9■□□□□ 0.3
TNXB-206ENST00000490077 ATF7IPQ6VMQ6 1270 aa16.89■□□□□ 0.3
TNXB-206ENST00000490077 AEBP1Q8IUX7 1158 aa16.89■□□□□ 0.29
TNXB-206ENST00000490077 RBM42Q9BTD8 480 aaKnown RBP16.89■□□□□ 0.29
TNXB-206ENST00000490077 ABCC11Q96J66 1382 aa16.88■□□□□ 0.29
TNXB-206ENST00000490077 PIK3C2BO00750 1634 aa16.88■□□□□ 0.29
TNXB-206ENST00000490077 CCDC27Q2M243 656 aa16.88■□□□□ 0.29
TNXB-206ENST00000490077 PMFBP1Q8TBY8 1022 aa16.88■□□□□ 0.29
TNXB-206ENST00000490077 RWDD1Q9H446 243 aaPredicted RBP16.88■□□□□ 0.29
TNXB-206ENST00000490077 SETBP1Q9Y6X0 1596 aa16.88■□□□□ 0.29
TNXB-206ENST00000490077 CD2BP2O95400 341 aaKnown RBP16.88■□□□□ 0.29
TNXB-206ENST00000490077 PTPRMP28827 1452 aa16.87■□□□□ 0.29
TNXB-206ENST00000490077 NEURL4Q96JN8 1562 aa16.87■□□□□ 0.29
TNXB-206ENST00000490077 COL3A1P02461 1466 aaPredicted RBP16.87■□□□□ 0.29
TNXB-206ENST00000490077 C8orf58Q8NAV2 365 aa16.87■□□□□ 0.29
TNXB-206ENST00000490077 RPGRIP1LQ68CZ1 1315 aa16.86■□□□□ 0.29
TNXB-206ENST00000490077 RSPH6AQ9H0K4 717 aa16.86■□□□□ 0.29
TNXB-206ENST00000490077 ZBTB40Q9NUA8 1239 aa16.86■□□□□ 0.29
TNXB-206ENST00000490077 MIS18AQ9NYP9 233 aa16.86■□□□□ 0.29
TNXB-206ENST00000490077 YTHDC2Q9H6S0 1430 aaKnown RBP16.86■□□□□ 0.29
TNXB-206ENST00000490077 SIRT2Q8IXJ6 389 aa16.86■□□□□ 0.29
TNXB-206ENST00000490077 APBB1O00213 710 aa16.85■□□□□ 0.29
TNXB-206ENST00000490077 C16orf71Q8IYS4 520 aaPredicted RBP16.84■□□□□ 0.29
TNXB-206ENST00000490077 KIF13AQ9H1H9 1805 aa16.84■□□□□ 0.29
TNXB-206ENST00000490077 C22orf23Q9BZE7 217 aa16.83■□□□□ 0.28
TNXB-206ENST00000490077 TERF2IPQ9NYB0 399 aa16.83■□□□□ 0.28
TNXB-206ENST00000490077 SLC24A1O60721 1099 aa16.82■□□□□ 0.28
TNXB-206ENST00000490077 OTUD7AQ8TE49 926 aaPredicted RBP16.82■□□□□ 0.28
TNXB-206ENST00000490077 PANK2Q9BZ23 570 aa16.82■□□□□ 0.28
TNXB-206ENST00000490077 MBIPQ9NS73 344 aa16.82■□□□□ 0.28
TNXB-206ENST00000490077 ANKRD45Q5TZF3 282 aa16.82■□□□□ 0.28
TNXB-206ENST00000490077 VAMP4O75379 141 aa16.81■□□□□ 0.28
TNXB-206ENST00000490077 METP08581 1390 aa16.8■□□□□ 0.28
TNXB-206ENST00000490077 HDGFL2Q7Z4V5 671 aaPredicted RBP16.79■□□□□ 0.28
TNXB-206ENST00000490077 SLC52A1Q9NWF4 448 aa16.79■□□□□ 0.28
TNXB-206ENST00000490077 MCM10Q7L590 875 aa16.79■□□□□ 0.28
TNXB-206ENST00000490077 NGEFQ8N5V2 710 aa16.79■□□□□ 0.28
TNXB-206ENST00000490077 ARHGAP31Q2M1Z3 1444 aa16.79■□□□□ 0.28
TNXB-206ENST00000490077 FOXO3O43524 673 aa16.78■□□□□ 0.28
TNXB-206ENST00000490077 SMC5Q8IY18 1101 aa16.78■□□□□ 0.28
TNXB-206ENST00000490077 ZBTB7BO15156 539 aaPredicted RBP16.77■□□□□ 0.28
TNXB-206ENST00000490077 CHAMP1Q96JM3 812 aa16.77■□□□□ 0.28
TNXB-206ENST00000490077 LRRC7Q96NW7 1537 aa16.77■□□□□ 0.28
TNXB-206ENST00000490077 IL13P35225 146 aa16.77■□□□□ 0.28
TNXB-206ENST00000490077 DDX19BQ9UMR2 479 aa16.77■□□□□ 0.28
TNXB-206ENST00000490077 ADGRB2O60241 1585 aa16.77■□□□□ 0.27
TNXB-206ENST00000490077 MRPL50Q8N5N7 158 aaKnown RBP16.77■□□□□ 0.27
TNXB-206ENST00000490077 SMARCA5O60264 1052 aaPredicted RBP16.76■□□□□ 0.27
TNXB-206ENST00000490077 PPIP5K1Q6PFW1 1433 aa16.76■□□□□ 0.27
TNXB-206ENST00000490077 ARHGEF40Q8TER5 1519 aa16.76■□□□□ 0.27
TNXB-206ENST00000490077 PLEKHG5O94827 1062 aa16.76■□□□□ 0.27
TNXB-206ENST00000490077 PRR36Q9H6K5 1346 aa16.76■□□□□ 0.27
TNXB-206ENST00000490077 HDAC1Q13547 482 aaPredicted RBP16.75■□□□□ 0.27
TNXB-206ENST00000490077 KIF2CQ99661 725 aa16.75■□□□□ 0.27
TNXB-206ENST00000490077 TMEM131LA2VDJ0 1609 aa16.75■□□□□ 0.27
TNXB-206ENST00000490077 PNPLA6Q8IY17 1366 aa16.74■□□□□ 0.27
TNXB-206ENST00000490077 CEBPAP49715 358 aaPredicted RBP16.74■□□□□ 0.27
TNXB-206ENST00000490077 NUCB1Q02818 461 aa16.74■□□□□ 0.27
TNXB-206ENST00000490077 CHD1LQ86WJ1 897 aa16.74■□□□□ 0.27
TNXB-206ENST00000490077 ALKQ9UM73 1620 aa16.74■□□□□ 0.27
TNXB-206ENST00000490077 HSP90AB2PQ58FF8 381 aa16.74■□□□□ 0.27
TNXB-206ENST00000490077 NUDT16Q96DE0 195 aaKnown RBP16.74■□□□□ 0.27
TNXB-206ENST00000490077 FCHSD2O94868 740 aa16.73■□□□□ 0.27
TNXB-206ENST00000490077 BECN1Q14457 450 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms