RNA–Protein interactions for RNA: ENST00000489419.1

CSMD2-209, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2

Gene CSMD2, Length 2,431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-209ENST00000489419 KNDC1Q76NI1 1749 aa11.47□□□□□ -0.57
CSMD2-209ENST00000489419 U2AF1L5P0DN76 240 aaPredicted RBP11.47□□□□□ -0.57
CSMD2-209ENST00000489419 U2AF1Q01081 240 aaKnown RBP eCLIP11.47□□□□□ -0.57
CSMD2-209ENST00000489419 AAMPQ13685 434 aa11.47□□□□□ -0.57
CSMD2-209ENST00000489419 C20orf194Q5TEA3 1177 aa11.47□□□□□ -0.57
CSMD2-209ENST00000489419 GGNBP2Q9H3C7 697 aa11.47□□□□□ -0.57
CSMD2-209ENST00000489419 COL3A1P02461 1466 aaPredicted RBP11.47□□□□□ -0.57
CSMD2-209ENST00000489419 ADGRB2O60241 1585 aa11.46□□□□□ -0.57
CSMD2-209ENST00000489419 TMEM2Q9UHN6 1383 aa11.46□□□□□ -0.57
CSMD2-209ENST00000489419 WASLO00401 505 aaPredicted RBP11.46□□□□□ -0.57
CSMD2-209ENST00000489419 CENPQQ7L2Z9 268 aaPredicted RBP11.46□□□□□ -0.57
CSMD2-209ENST00000489419 RTN4Q9NQC3 1192 aaKnown RBP11.46□□□□□ -0.57
CSMD2-209ENST00000489419 WAPLQ7Z5K2 1190 aa11.46□□□□□ -0.58
CSMD2-209ENST00000489419 DMRT2Q9Y5R5 561 aa11.46□□□□□ -0.58
CSMD2-209ENST00000489419 MSH5O43196 834 aa11.45□□□□□ -0.58
CSMD2-209ENST00000489419 CT47B1P0C2W7 299 aaPredicted RBP11.45□□□□□ -0.58
CSMD2-209ENST00000489419 ADRA2BP18089 450 aa11.45□□□□□ -0.58
CSMD2-209ENST00000489419 MYH16Q9H6N6 1097 aa11.45□□□□□ -0.58
CSMD2-209ENST00000489419 KDM2BQ8NHM5 1336 aa11.45□□□□□ -0.58
CSMD2-209ENST00000489419 METP08581 1390 aa11.45□□□□□ -0.58
CSMD2-209ENST00000489419 CPSF1Q10570 1443 aaKnown RBP11.45□□□□□ -0.58
CSMD2-209ENST00000489419 CPS1P31327 1500 aa11.44□□□□□ -0.58
CSMD2-209ENST00000489419 KIF20BQ96Q89 1820 aa11.44□□□□□ -0.58
CSMD2-209ENST00000489419 A0A0U1RQG5 324 aaPredicted RBP11.44□□□□□ -0.58
CSMD2-209ENST00000489419 PLEKHF1Q96S99 279 aa11.44□□□□□ -0.58
CSMD2-209ENST00000489419 UBR1Q8IWV7 1749 aa11.44□□□□□ -0.58
CSMD2-209ENST00000489419 EDC4Q6P2E9 1401 aaKnown RBP11.44□□□□□ -0.58
CSMD2-209ENST00000489419 TAF7LQ5H9L4 462 aa11.44□□□□□ -0.58
CSMD2-209ENST00000489419 ZMYND15Q9H091 742 aa11.44□□□□□ -0.58
CSMD2-209ENST00000489419 DIAPH1O60610 1272 aaKnown RBP11.43□□□□□ -0.58
CSMD2-209ENST00000489419 IL16Q14005 1332 aa11.43□□□□□ -0.58
CSMD2-209ENST00000489419 CDC42BPGQ6DT37 1551 aa11.43□□□□□ -0.58
CSMD2-209ENST00000489419 BCAR3O75815 825 aa11.43□□□□□ -0.58
CSMD2-209ENST00000489419 RARSP54136 660 aaKnown RBP11.42□□□□□ -0.58
CSMD2-209ENST00000489419 NEUROD2Q15784 382 aa11.42□□□□□ -0.58
CSMD2-209ENST00000489419 ZNF692Q9BU19 519 aaPredicted RBP11.42□□□□□ -0.58
CSMD2-209ENST00000489419 RRP7AQ9Y3A4 280 aaKnown RBP11.42□□□□□ -0.58
CSMD2-209ENST00000489419 CCDC61Q9Y6R9 512 aa11.42□□□□□ -0.58
CSMD2-209ENST00000489419 PLEKHG1Q9ULL1 1385 aa11.42□□□□□ -0.58
CSMD2-209ENST00000489419 FCHSD2O94868 740 aa11.41□□□□□ -0.58
CSMD2-209ENST00000489419 ANP32AP39687 249 aaKnown RBP11.41□□□□□ -0.58
CSMD2-209ENST00000489419 TMPOP42166 694 aaKnown RBP11.41□□□□□ -0.58
CSMD2-209ENST00000489419 TXNDC2Q86VQ3 553 aa11.41□□□□□ -0.58
CSMD2-209ENST00000489419 NUDT16Q96DE0 195 aaKnown RBP11.41□□□□□ -0.58
CSMD2-209ENST00000489419 BACH2Q9BYV9 841 aa11.41□□□□□ -0.58
CSMD2-209ENST00000489419 MAPK8IP3Q9UPT6 1336 aa11.41□□□□□ -0.58
CSMD2-209ENST00000489419 AATKQ6ZMQ8 1374 aa11.41□□□□□ -0.58
CSMD2-209ENST00000489419 PPIP5K1Q6PFW1 1433 aa11.41□□□□□ -0.58
CSMD2-209ENST00000489419 U2SURPO15042 1029 aaKnown RBP11.4□□□□□ -0.58
CSMD2-209ENST00000489419 PDE4AP27815 886 aa11.4□□□□□ -0.58
CSMD2-209ENST00000489419 GLIPR1L2Q4G1C9 344 aa11.4□□□□□ -0.58
CSMD2-209ENST00000489419 ADAMTS13Q76LX8 1427 aa11.4□□□□□ -0.58
CSMD2-209ENST00000489419 POLKQ9UBT6 870 aa11.39□□□□□ -0.59
CSMD2-209ENST00000489419 RBM10P98175 930 aaKnown RBP11.38□□□□□ -0.59
CSMD2-209ENST00000489419 CANXP27824 592 aaKnown RBP11.38□□□□□ -0.59
CSMD2-209ENST00000489419 ILDR2Q71H61 639 aa11.38□□□□□ -0.59
CSMD2-209ENST00000489419 TRIM35Q9UPQ4 493 aa11.38□□□□□ -0.59
CSMD2-209ENST00000489419 EID1Q9Y6B2 187 aa11.38□□□□□ -0.59
CSMD2-209ENST00000489419 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.37□□□□□ -0.59
CSMD2-209ENST00000489419 IPO9Q96P70 1041 aaKnown RBP11.37□□□□□ -0.59
CSMD2-209ENST00000489419 SLIT1O75093 1534 aa11.37□□□□□ -0.59
CSMD2-209ENST00000489419 ARHGAP23Q9P227 1491 aa11.37□□□□□ -0.59
CSMD2-209ENST00000489419 NEFMP07197 916 aa11.37□□□□□ -0.59
CSMD2-209ENST00000489419 MON2Q7Z3U7 1717 aa11.37□□□□□ -0.59
CSMD2-209ENST00000489419 CDK12Q9NYV4 1490 aaPredicted RBP11.36□□□□□ -0.59
CSMD2-209ENST00000489419 PLEKHG3A1L390 1219 aa11.36□□□□□ -0.59
CSMD2-209ENST00000489419 IL27Q8NEV9 243 aa11.36□□□□□ -0.59
CSMD2-209ENST00000489419 CLUAP1Q96AJ1 413 aa11.36□□□□□ -0.59
CSMD2-209ENST00000489419 TBX22Q9Y458 520 aa11.36□□□□□ -0.59
CSMD2-209ENST00000489419 ROBO2Q9HCK4 1378 aa11.36□□□□□ -0.59
CSMD2-209ENST00000489419 LTKP29376 864 aa11.36□□□□□ -0.59
CSMD2-209ENST00000489419 RIPK4P57078 832 aa11.36□□□□□ -0.59
CSMD2-209ENST00000489419 COG3Q96JB2 828 aa11.36□□□□□ -0.59
CSMD2-209ENST00000489419 AKAP12Q02952 1782 aa11.36□□□□□ -0.59
CSMD2-209ENST00000489419 RSPH6AQ9H0K4 717 aa11.35□□□□□ -0.59
CSMD2-209ENST00000489419 CALD1Q05682 793 aaKnown RBP11.35□□□□□ -0.59
CSMD2-209ENST00000489419 ZNF428Q96B54 188 aa11.35□□□□□ -0.59
CSMD2-209ENST00000489419 THEMISQ8N1K5 641 aaPredicted RBP11.34□□□□□ -0.59
CSMD2-209ENST00000489419 PMFBP1Q8TBY8 1022 aa11.34□□□□□ -0.59
CSMD2-209ENST00000489419 NOP58Q9Y2X3 529 aaKnown RBP11.34□□□□□ -0.59
CSMD2-209ENST00000489419 C3P01024 1663 aa11.34□□□□□ -0.59
CSMD2-209ENST00000489419 IL13P35225 146 aa11.34□□□□□ -0.59
CSMD2-209ENST00000489419 NME9Q86XW9 330 aa11.34□□□□□ -0.59
CSMD2-209ENST00000489419 PANK1Q8TE04 598 aa11.34□□□□□ -0.59
CSMD2-209ENST00000489419 MAP2P11137 1827 aaKnown RBP11.34□□□□□ -0.59
CSMD2-209ENST00000489419 PRR36Q9H6K5 1346 aa11.33□□□□□ -0.6
CSMD2-209ENST00000489419 ITSN1Q15811 1721 aa11.33□□□□□ -0.6
CSMD2-209ENST00000489419 ZKSCAN2Q63HK3 967 aa11.33□□□□□ -0.6
CSMD2-209ENST00000489419 HOMEZQ8IX15 550 aa11.33□□□□□ -0.6
CSMD2-209ENST00000489419 FRAT1Q92837 279 aaPredicted RBP11.33□□□□□ -0.6
CSMD2-209ENST00000489419 COG6Q9Y2V7 657 aa11.33□□□□□ -0.6
CSMD2-209ENST00000489419 DIP2AQ14689 1571 aa11.33□□□□□ -0.6
CSMD2-209ENST00000489419 NFE2L2Q16236 605 aa11.33□□□□□ -0.6
CSMD2-209ENST00000489419 EXOSC9Q06265 439 aaKnown RBP11.32□□□□□ -0.6
CSMD2-209ENST00000489419 LRRC7Q96NW7 1537 aa11.32□□□□□ -0.6
CSMD2-209ENST00000489419 PTCH1Q13635 1447 aa11.32□□□□□ -0.6
CSMD2-209ENST00000489419 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.32□□□□□ -0.6
CSMD2-209ENST00000489419 PRKAR2BP31323 418 aa11.31□□□□□ -0.6
CSMD2-209ENST00000489419 ALDH1L2Q3SY69 923 aa11.31□□□□□ -0.6
CSMD2-209ENST00000489419 TOPAZ1Q8N9V7 1692 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms