RNA–Protein interactions for RNA: ENST00000488175.5

GCOM1-210, Transcript of GRINL1A complex locus 1, humanhuman

TSL 1 (best)

Gene GCOM1, Length 2,601 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-210ENST00000488175 TULP4Q9NRJ4 1543 aa20.65■□□□□ 0.9
GCOM1-210ENST00000488175 KIDINS220Q9ULH0 1771 aa20.65■□□□□ 0.9
GCOM1-210ENST00000488175 VGFO15240 615 aaPredicted RBP20.64■□□□□ 0.9
GCOM1-210ENST00000488175 TRAK2O60296 914 aa20.64■□□□□ 0.9
GCOM1-210ENST00000488175 LNPKQ9C0E8 428 aa20.64■□□□□ 0.9
GCOM1-210ENST00000488175 ZBTB40Q9NUA8 1239 aa20.64■□□□□ 0.9
GCOM1-210ENST00000488175 ASXL2Q76L83 1435 aa20.64■□□□□ 0.89
GCOM1-210ENST00000488175 HSCBQ8IWL3 235 aa20.63■□□□□ 0.89
GCOM1-210ENST00000488175 ZC3H13Q5T200 1668 aaKnown RBP20.63■□□□□ 0.89
GCOM1-210ENST00000488175 PUS7Q96PZ0 661 aaKnown RBP20.63■□□□□ 0.89
GCOM1-210ENST00000488175 RSPH6AQ9H0K4 717 aa20.63■□□□□ 0.89
GCOM1-210ENST00000488175 FSD2A1L4K1 749 aa20.62■□□□□ 0.89
GCOM1-210ENST00000488175 FYB1O15117 783 aa20.62■□□□□ 0.89
GCOM1-210ENST00000488175 USP32Q8NFA0 1604 aa20.62■□□□□ 0.89
GCOM1-210ENST00000488175 ADGRB2O60241 1585 aa20.61■□□□□ 0.89
GCOM1-210ENST00000488175 PPLO60437 1756 aa20.6■□□□□ 0.89
GCOM1-210ENST00000488175 MINK1Q8N4C8 1332 aaPredicted RBP20.6■□□□□ 0.89
GCOM1-210ENST00000488175 ABCC11Q96J66 1382 aa20.6■□□□□ 0.89
GCOM1-210ENST00000488175 ZNF692Q9BU19 519 aaPredicted RBP20.59■□□□□ 0.89
GCOM1-210ENST00000488175 GLI2P10070 1586 aa20.59■□□□□ 0.89
GCOM1-210ENST00000488175 FBLN1P23142 703 aa20.58■□□□□ 0.89
GCOM1-210ENST00000488175 NUCB1Q02818 461 aa20.58■□□□□ 0.89
GCOM1-210ENST00000488175 IPO8O15397 1037 aaKnown RBP20.58■□□□□ 0.89
GCOM1-210ENST00000488175 DIAPH1O60610 1272 aaKnown RBP20.58■□□□□ 0.89
GCOM1-210ENST00000488175 IDI1Q13907 227 aa20.57■□□□□ 0.88
GCOM1-210ENST00000488175 CHD1LQ86WJ1 897 aa20.57■□□□□ 0.88
GCOM1-210ENST00000488175 IL16Q14005 1332 aa20.57■□□□□ 0.88
GCOM1-210ENST00000488175 KIF16BQ96L93 1317 aa20.57■□□□□ 0.88
GCOM1-210ENST00000488175 C1orf115Q9H7X2 142 aa20.56■□□□□ 0.88
GCOM1-210ENST00000488175 RBM25P49756 843 aaKnown RBP20.55■□□□□ 0.88
GCOM1-210ENST00000488175 PRAM1Q96QH2 718 aa20.55■□□□□ 0.88
GCOM1-210ENST00000488175 TERF2IPQ9NYB0 399 aa20.55■□□□□ 0.88
GCOM1-210ENST00000488175 COL3A1P02461 1466 aaPredicted RBP20.54■□□□□ 0.88
GCOM1-210ENST00000488175 ANKRD45Q5TZF3 282 aa20.54■□□□□ 0.88
GCOM1-210ENST00000488175 FRMPD1Q5SYB0 1578 aa20.54■□□□□ 0.88
GCOM1-210ENST00000488175 FOXD4L1Q9NU39 408 aa20.54■□□□□ 0.88
GCOM1-210ENST00000488175 THUMPD2Q9BTF0 503 aaKnown RBP20.53■□□□□ 0.88
GCOM1-210ENST00000488175 RAPGEF3O95398 923 aa20.53■□□□□ 0.88
GCOM1-210ENST00000488175 ELL2O00472 640 aaPredicted RBP20.52■□□□□ 0.87
GCOM1-210ENST00000488175 HSP90AB1P08238 724 aaKnown RBP20.52■□□□□ 0.87
GCOM1-210ENST00000488175 PRKAR2BP31323 418 aa20.52■□□□□ 0.87
GCOM1-210ENST00000488175 DDIT3P35638 169 aa20.52■□□□□ 0.87
GCOM1-210ENST00000488175 TNPO1Q92973 898 aaKnown RBP20.52■□□□□ 0.87
GCOM1-210ENST00000488175 DDX11L8A8MPP1 907 aa20.51■□□□□ 0.87
GCOM1-210ENST00000488175 ABCC3O15438 1527 aa20.51■□□□□ 0.87
GCOM1-210ENST00000488175 ALDH1L2Q3SY69 923 aa20.51■□□□□ 0.87
GCOM1-210ENST00000488175 ARHGEF28Q8N1W1 1705 aaKnown RBP20.5■□□□□ 0.87
GCOM1-210ENST00000488175 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.5■□□□□ 0.87
GCOM1-210ENST00000488175 CABP1Q9NZU7 370 aa20.5■□□□□ 0.87
GCOM1-210ENST00000488175 POGZQ7Z3K3 1410 aa20.5■□□□□ 0.87
GCOM1-210ENST00000488175 CD2BP2O95400 341 aaKnown RBP20.5■□□□□ 0.87
GCOM1-210ENST00000488175 HMOX1P09601 288 aa20.5■□□□□ 0.87
GCOM1-210ENST00000488175 MRE11P49959 708 aa20.5■□□□□ 0.87
GCOM1-210ENST00000488175 SNX21Q969T3 373 aa20.5■□□□□ 0.87
GCOM1-210ENST00000488175 ZBTB7BO15156 539 aaPredicted RBP20.49■□□□□ 0.87
GCOM1-210ENST00000488175 CAMSAP1Q5T5Y3 1602 aa20.49■□□□□ 0.87
GCOM1-210ENST00000488175 NPM1P06748 294 aaKnown RBP eCLIP20.49■□□□□ 0.87
GCOM1-210ENST00000488175 TSPYL6Q8N831 410 aa20.49■□□□□ 0.87
GCOM1-210ENST00000488175 PHACTR3Q96KR7 559 aa20.49■□□□□ 0.87
GCOM1-210ENST00000488175 KIF2CQ99661 725 aa20.49■□□□□ 0.87
GCOM1-210ENST00000488175 GRPEL1Q9HAV7 217 aa20.49■□□□□ 0.87
GCOM1-210ENST00000488175 NEXMIFQ5QGS0 1516 aa20.49■□□□□ 0.87
GCOM1-210ENST00000488175 BMP2KLQ5H9B9 411 aa20.48■□□□□ 0.87
GCOM1-210ENST00000488175 RBM42Q9BTD8 480 aaKnown RBP20.48■□□□□ 0.87
GCOM1-210ENST00000488175 FCHSD2O94868 740 aa20.48■□□□□ 0.87
GCOM1-210ENST00000488175 HDGFL2Q7Z4V5 671 aaPredicted RBP20.48■□□□□ 0.87
GCOM1-210ENST00000488175 PNNQ9H307 717 aaKnown RBP20.48■□□□□ 0.87
GCOM1-210ENST00000488175 NCOA3Q9Y6Q9 1424 aa20.47■□□□□ 0.87
GCOM1-210ENST00000488175 HSP90AA1P07900 732 aaKnown RBP20.47■□□□□ 0.87
GCOM1-210ENST00000488175 CDK19Q9BWU1 502 aa20.47■□□□□ 0.87
GCOM1-210ENST00000488175 ATAD2Q6PL18 1390 aa20.47■□□□□ 0.87
GCOM1-210ENST00000488175 PPIP5K1Q6PFW1 1433 aa20.46■□□□□ 0.87
GCOM1-210ENST00000488175 CD163L1Q9NR16 1453 aa20.46■□□□□ 0.87
GCOM1-210ENST00000488175 MLH3Q9UHC1 1453 aa20.46■□□□□ 0.87
GCOM1-210ENST00000488175 VAMP4O75379 141 aa20.46■□□□□ 0.87
GCOM1-210ENST00000488175 HECW2Q9P2P5 1572 aa20.45■□□□□ 0.86
GCOM1-210ENST00000488175 TBC1D9Q6ZT07 1266 aa20.45■□□□□ 0.86
GCOM1-210ENST00000488175 PNPLA6Q8IY17 1366 aa20.45■□□□□ 0.86
GCOM1-210ENST00000488175 SIRT2Q8IXJ6 389 aa20.45■□□□□ 0.86
GCOM1-210ENST00000488175 GAS2L3Q86XJ1 694 aa20.44■□□□□ 0.86
GCOM1-210ENST00000488175 MRPL50Q8N5N7 158 aaKnown RBP20.44■□□□□ 0.86
GCOM1-210ENST00000488175 POLKQ9UBT6 870 aa20.44■□□□□ 0.86
GCOM1-210ENST00000488175 SIGLEC1Q9BZZ2 1709 aa20.44■□□□□ 0.86
GCOM1-210ENST00000488175 NAP1L5Q96NT1 182 aaPredicted RBP20.44■□□□□ 0.86
GCOM1-210ENST00000488175 RAB3GAP1Q15042 981 aa20.43■□□□□ 0.86
GCOM1-210ENST00000488175 CLCN1P35523 988 aa20.43■□□□□ 0.86
GCOM1-210ENST00000488175 GCC1Q96CN9 775 aa20.43■□□□□ 0.86
GCOM1-210ENST00000488175 GBP4Q96PP9 640 aa20.42■□□□□ 0.86
GCOM1-210ENST00000488175 NFE2L2Q16236 605 aa20.41■□□□□ 0.86
GCOM1-210ENST00000488175 PTPRMP28827 1452 aa20.41■□□□□ 0.86
GCOM1-210ENST00000488175 SLC52A1Q9NWF4 448 aa20.4■□□□□ 0.86
GCOM1-210ENST00000488175 CIZ1Q9ULV3 898 aaPredicted RBP20.4■□□□□ 0.86
GCOM1-210ENST00000488175 BRPF1P55201 1214 aaPredicted RBP20.4■□□□□ 0.86
GCOM1-210ENST00000488175 UBE2Q2Q8WVN8 375 aa20.4■□□□□ 0.86
GCOM1-210ENST00000488175 MBIPQ9NS73 344 aa20.4■□□□□ 0.86
GCOM1-210ENST00000488175 K7ELQ4 463 aaPredicted RBP20.4■□□□□ 0.86
GCOM1-210ENST00000488175 YTHDC2Q9H6S0 1430 aaKnown RBP20.39■□□□□ 0.85
GCOM1-210ENST00000488175 ZNF428Q96B54 188 aa20.39■□□□□ 0.85
GCOM1-210ENST00000488175 EMILIN1Q9Y6C2 1016 aa20.39■□□□□ 0.85
GCOM1-210ENST00000488175 LRRC7Q96NW7 1537 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms