RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 ORAI2Q96SN7 254 aa10.37□□□□□ -0.75
UBE4B-209ENST00000487244 CIZ1Q9ULV3 898 aaPredicted RBP10.37□□□□□ -0.75
UBE4B-209ENST00000487244 NBPF1Q3BBV0 1214 aa10.36□□□□□ -0.75
UBE4B-209ENST00000487244 KIF12Q96FN5 646 aa10.36□□□□□ -0.75
UBE4B-209ENST00000487244 STAC3Q96MF2 364 aa10.36□□□□□ -0.75
UBE4B-209ENST00000487244 SIRT1Q96EB6 747 aa10.35□□□□□ -0.75
UBE4B-209ENST00000487244 LRP6O75581 1613 aa10.35□□□□□ -0.75
UBE4B-209ENST00000487244 ILDR2Q71H61 639 aa10.34□□□□□ -0.75
UBE4B-209ENST00000487244 HIRIP3Q9BW71 556 aaPredicted RBP10.34□□□□□ -0.75
UBE4B-209ENST00000487244 PCGF6Q9BYE7 350 aa10.34□□□□□ -0.75
UBE4B-209ENST00000487244 POGKQ9P215 609 aa10.34□□□□□ -0.75
UBE4B-209ENST00000487244 JCADQ9P266 1359 aa10.34□□□□□ -0.75
UBE4B-209ENST00000487244 KIF1AQ12756 1690 aa10.34□□□□□ -0.75
UBE4B-209ENST00000487244 MINK1Q8N4C8 1332 aaPredicted RBP10.33□□□□□ -0.76
UBE4B-209ENST00000487244 MAP3K13O43283 966 aa10.33□□□□□ -0.76
UBE4B-209ENST00000487244 GALR2O43603 387 aaPredicted RBP10.33□□□□□ -0.76
UBE4B-209ENST00000487244 PXDNQ92626 1479 aa10.33□□□□□ -0.76
UBE4B-209ENST00000487244 QRICH2Q9H0J4 1663 aa10.33□□□□□ -0.76
UBE4B-209ENST00000487244 PYGBP11216 843 aa10.32□□□□□ -0.76
UBE4B-209ENST00000487244 XPCQ01831 940 aaPredicted RBP10.32□□□□□ -0.76
UBE4B-209ENST00000487244 ESCO1Q5FWF5 840 aa10.32□□□□□ -0.76
UBE4B-209ENST00000487244 PNPLA6Q8IY17 1366 aa10.31□□□□□ -0.76
UBE4B-209ENST00000487244 NBPF8Q3BBV2 869 aa10.31□□□□□ -0.76
UBE4B-209ENST00000487244 MS4A3Q96HJ5 214 aa10.31□□□□□ -0.76
UBE4B-209ENST00000487244 DCBLD2Q96PD2 775 aa10.31□□□□□ -0.76
UBE4B-209ENST00000487244 TULP4Q9NRJ4 1543 aa10.31□□□□□ -0.76
UBE4B-209ENST00000487244 FOXO3O43524 673 aa10.3□□□□□ -0.76
UBE4B-209ENST00000487244 RGS17Q9UGC6 210 aaPredicted RBP10.3□□□□□ -0.76
UBE4B-209ENST00000487244 TOPAZ1Q8N9V7 1692 aa10.3□□□□□ -0.76
UBE4B-209ENST00000487244 SOS2Q07890 1332 aaPredicted RBP10.3□□□□□ -0.76
UBE4B-209ENST00000487244 PRR36Q9H6K5 1346 aa10.3□□□□□ -0.76
UBE4B-209ENST00000487244 COL22A1Q8NFW1 1626 aaPredicted RBP10.29□□□□□ -0.76
UBE4B-209ENST00000487244 TONSLQ96HA7 1378 aa10.29□□□□□ -0.76
UBE4B-209ENST00000487244 PCDHB13Q9Y5F0 798 aa10.29□□□□□ -0.76
UBE4B-209ENST00000487244 ANKARQ7Z5J8 1434 aa10.29□□□□□ -0.76
UBE4B-209ENST00000487244 ITSN1Q15811 1721 aa10.29□□□□□ -0.76
UBE4B-209ENST00000487244 ATP7BP35670 1465 aa10.29□□□□□ -0.76
UBE4B-209ENST00000487244 ROCK2O75116 1388 aaKnown RBP10.28□□□□□ -0.76
UBE4B-209ENST00000487244 TRPM3Q9HCF6 1732 aaPredicted RBP10.28□□□□□ -0.76
UBE4B-209ENST00000487244 LRRC59Q96AG4 307 aaKnown RBP10.28□□□□□ -0.76
UBE4B-209ENST00000487244 SGIP1Q9BQI5 828 aa10.28□□□□□ -0.76
UBE4B-209ENST00000487244 SPATA31A6Q5VVP1 1343 aa10.28□□□□□ -0.76
UBE4B-209ENST00000487244 NPHP3Q7Z494 1330 aa10.28□□□□□ -0.76
UBE4B-209ENST00000487244 NUTM2BA6NNL0 878 aaPredicted RBP10.27□□□□□ -0.77
UBE4B-209ENST00000487244 NUTM2EB1AL46 878 aaPredicted RBP10.27□□□□□ -0.77
UBE4B-209ENST00000487244 WASLO00401 505 aaPredicted RBP10.27□□□□□ -0.77
UBE4B-209ENST00000487244 NUTM2AQ8IVF1 878 aaPredicted RBP10.27□□□□□ -0.77
UBE4B-209ENST00000487244 PHF8Q9UPP1 1060 aa10.27□□□□□ -0.77
UBE4B-209ENST00000487244 RALGAPBQ86X10 1494 aa10.27□□□□□ -0.77
UBE4B-209ENST00000487244 ABCA3Q99758 1704 aa10.27□□□□□ -0.77
UBE4B-209ENST00000487244 GPRASP1Q5JY77 1395 aa10.26□□□□□ -0.77
UBE4B-209ENST00000487244 PMFBP1Q8TBY8 1022 aa10.26□□□□□ -0.77
UBE4B-209ENST00000487244 MARF1Q9Y4F3 1742 aaKnown RBP10.26□□□□□ -0.77
UBE4B-209ENST00000487244 CENPJQ9HC77 1338 aaPredicted RBP10.26□□□□□ -0.77
UBE4B-209ENST00000487244 CHRM1P11229 460 aaPredicted RBP10.25□□□□□ -0.77
UBE4B-209ENST00000487244 EIF3AQ14152 1382 aaKnown RBP10.25□□□□□ -0.77
UBE4B-209ENST00000487244 ALS2Q96Q42 1657 aa10.25□□□□□ -0.77
UBE4B-209ENST00000487244 MEX3CQ5U5Q3 659 aaKnown RBP10.24□□□□□ -0.77
UBE4B-209ENST00000487244 POTEAQ6S8J7 498 aa10.24□□□□□ -0.77
UBE4B-209ENST00000487244 CDK19Q9BWU1 502 aa10.24□□□□□ -0.77
UBE4B-209ENST00000487244 TNS3Q68CZ2 1445 aa10.24□□□□□ -0.77
UBE4B-209ENST00000487244 KRT28Q7Z3Y7 464 aa10.23□□□□□ -0.77
UBE4B-209ENST00000487244 NUDT16Q96DE0 195 aaKnown RBP10.23□□□□□ -0.77
UBE4B-209ENST00000487244 CRYBG1Q9Y4K1 1723 aa10.23□□□□□ -0.77
UBE4B-209ENST00000487244 SPATA31A3Q5VYP0 1347 aa10.23□□□□□ -0.77
UBE4B-209ENST00000487244 ADAMTS2O95450 1211 aa10.22□□□□□ -0.77
UBE4B-209ENST00000487244 IFNL1Q8IU54 200 aa10.22□□□□□ -0.77
UBE4B-209ENST00000487244 CABP2Q9NPB3 220 aa10.22□□□□□ -0.77
UBE4B-209ENST00000487244 PSME1Q06323 249 aa10.21□□□□□ -0.77
UBE4B-209ENST00000487244 C8orf37Q96NL8 207 aa10.21□□□□□ -0.77
UBE4B-209ENST00000487244 CARD11Q9BXL7 1154 aa10.21□□□□□ -0.77
UBE4B-209ENST00000487244 SBNO1A3KN83 1393 aa10.21□□□□□ -0.78
UBE4B-209ENST00000487244 AFF2P51816 1311 aa10.2□□□□□ -0.78
UBE4B-209ENST00000487244 SRPK2P78362 688 aaKnown RBP10.2□□□□□ -0.78
UBE4B-209ENST00000487244 PPIP5K1Q6PFW1 1433 aa10.2□□□□□ -0.78
UBE4B-209ENST00000487244 POLR3AO14802 1390 aaPredicted RBP10.19□□□□□ -0.78
UBE4B-209ENST00000487244 POTEIP0CG38 1075 aa10.19□□□□□ -0.78
UBE4B-209ENST00000487244 ZNF467Q7Z7K2 595 aaPredicted RBP10.19□□□□□ -0.78
UBE4B-209ENST00000487244 NGDNQ8NEJ9 315 aaKnown RBP10.19□□□□□ -0.78
UBE4B-209ENST00000487244 CABLES1Q8TDN4 633 aa10.19□□□□□ -0.78
UBE4B-209ENST00000487244 PCDHB8Q9UN66 801 aa10.19□□□□□ -0.78
UBE4B-209ENST00000487244 AKAP12Q02952 1782 aa10.19□□□□□ -0.78
UBE4B-209ENST00000487244 PLCH1Q4KWH8 1693 aa10.18□□□□□ -0.78
UBE4B-209ENST00000487244 ACEP12821 1306 aa10.18□□□□□ -0.78
UBE4B-209ENST00000487244 CLSPNQ9HAW4 1339 aa10.18□□□□□ -0.78
UBE4B-209ENST00000487244 LMOD2Q6P5Q4 547 aa10.18□□□□□ -0.78
UBE4B-209ENST00000487244 CCER1Q8TC90 406 aaPredicted RBP10.18□□□□□ -0.78
UBE4B-209ENST00000487244 PHRF1Q9P1Y6 1649 aaKnown RBP10.18□□□□□ -0.78
UBE4B-209ENST00000487244 ARHGEF10O15013 1369 aa10.17□□□□□ -0.78
UBE4B-209ENST00000487244 SBNO2Q9Y2G9 1366 aa10.17□□□□□ -0.78
UBE4B-209ENST00000487244 EVC2Q86UK5 1308 aa10.17□□□□□ -0.78
UBE4B-209ENST00000487244 PLEKHG3A1L390 1219 aa10.17□□□□□ -0.78
UBE4B-209ENST00000487244 TIE1P35590 1138 aa10.17□□□□□ -0.78
UBE4B-209ENST00000487244 TRPC6Q9Y210 931 aa10.17□□□□□ -0.78
UBE4B-209ENST00000487244 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.16□□□□□ -0.78
UBE4B-209ENST00000487244 SOCS7O14512 581 aa10.16□□□□□ -0.78
UBE4B-209ENST00000487244 NGLY1Q96IV0 654 aa10.16□□□□□ -0.78
UBE4B-209ENST00000487244 NRKQ7Z2Y5 1582 aa10.16□□□□□ -0.78
UBE4B-209ENST00000487244 PIK3C2AO00443 1686 aa10.15□□□□□ -0.78
UBE4B-209ENST00000487244 ATMINO43313 823 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms