RNA–Protein interactions for RNA: ENST00000487168.1

KRIT1-223, Transcript of KRIT1, ankyrin repeat containing, human

TSL 2

Gene KRIT1, Length 600 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KRIT1-223	ENST00000487168	QRICH2	Q9H0J4	1663 aa		14.14	□□□□□ -0.15
KRIT1-223	ENST00000487168	POLR3A	O14802	1390 aa	Predicted RBP	14.14	□□□□□ -0.15
KRIT1-223	ENST00000487168	PLCB2	Q00722	1185 aa		14.14	□□□□□ -0.15
KRIT1-223	ENST00000487168	SAFB2	Q14151	953 aa	Known RBP eCLIP	14.14	□□□□□ -0.15
KRIT1-223	ENST00000487168	RGS17	Q9UGC6	210 aa	Predicted RBP	14.14	□□□□□ -0.15
KRIT1-223	ENST00000487168	SOCS7	O14512	581 aa		14.13	□□□□□ -0.15
KRIT1-223	ENST00000487168	CCDC61	Q9Y6R9	512 aa		14.13	□□□□□ -0.15
KRIT1-223	ENST00000487168	CDK12	Q9NYV4	1490 aa	Predicted RBP	14.12	□□□□□ -0.15
KRIT1-223	ENST00000487168	PLEKHG3	A1L390	1219 aa		14.12	□□□□□ -0.15
KRIT1-223	ENST00000487168	MEX3C	Q5U5Q3	659 aa	Known RBP	14.12	□□□□□ -0.15
KRIT1-223	ENST00000487168	ILDR2	Q71H61	639 aa		14.12	□□□□□ -0.15
KRIT1-223	ENST00000487168	KRT28	Q7Z3Y7	464 aa		14.12	□□□□□ -0.15
KRIT1-223	ENST00000487168	DDX17	Q92841	729 aa	Known RBP	14.12	□□□□□ -0.15
KRIT1-223	ENST00000487168	TRPM3	Q9HCF6	1732 aa	Predicted RBP	14.12	□□□□□ -0.15
KRIT1-223	ENST00000487168	PRR36	Q9H6K5	1346 aa		14.12	□□□□□ -0.15
KRIT1-223	ENST00000487168	NUDT16	Q96DE0	195 aa	Known RBP	14.11	□□□□□ -0.15
KRIT1-223	ENST00000487168	HIRIP3	Q9BW71	556 aa	Predicted RBP	14.11	□□□□□ -0.15
KRIT1-223	ENST00000487168	ALS2	Q96Q42	1657 aa		14.1	□□□□□ -0.15
KRIT1-223	ENST00000487168	MARF1	Q9Y4F3	1742 aa	Known RBP	14.1	□□□□□ -0.15
KRIT1-223	ENST00000487168	PUS7	Q96PZ0	661 aa	Known RBP	14.1	□□□□□ -0.15
KRIT1-223	ENST00000487168	CDK19	Q9BWU1	502 aa		14.1	□□□□□ -0.15
KRIT1-223	ENST00000487168	EVC2	Q86UK5	1308 aa		14.1	□□□□□ -0.15
KRIT1-223	ENST00000487168	NUTM2F	A1L443	756 aa		14.09	□□□□□ -0.15
KRIT1-223	ENST00000487168	IFNLR1	Q8IU57	520 aa	Predicted RBP	14.09	□□□□□ -0.15
KRIT1-223	ENST00000487168	FNBP4	Q8N3X1	1017 aa	Predicted RBP	14.09	□□□□□ -0.15
KRIT1-223	ENST00000487168	NBPF8	Q3BBV2	869 aa		14.08	□□□□□ -0.16
KRIT1-223	ENST00000487168	PIP4P2	Q8N4L2	257 aa		14.08	□□□□□ -0.16
KRIT1-223	ENST00000487168	ATAD2	Q6PL18	1390 aa		14.08	□□□□□ -0.16
KRIT1-223	ENST00000487168	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	14.07	□□□□□ -0.16
KRIT1-223	ENST00000487168	PITPNM1	O00562	1244 aa		14.07	□□□□□ -0.16
KRIT1-223	ENST00000487168	NGDN	Q8NEJ9	315 aa	Known RBP	14.06	□□□□□ -0.16
KRIT1-223	ENST00000487168	CARD11	Q9BXL7	1154 aa		14.06	□□□□□ -0.16
KRIT1-223	ENST00000487168	AFF2	P51816	1311 aa		14.06	□□□□□ -0.16
KRIT1-223	ENST00000487168	ABCA3	Q99758	1704 aa		14.06	□□□□□ -0.16
KRIT1-223	ENST00000487168	NWD2	Q9ULI1	1742 aa		14.05	□□□□□ -0.16
KRIT1-223	ENST00000487168	NUTM2B	A6NNL0	878 aa	Predicted RBP	14.05	□□□□□ -0.16
KRIT1-223	ENST00000487168	NUTM2E	B1AL46	878 aa	Predicted RBP	14.05	□□□□□ -0.16
KRIT1-223	ENST00000487168	POTEA	Q6S8J7	498 aa		14.05	□□□□□ -0.16
KRIT1-223	ENST00000487168	NUTM2A	Q8IVF1	878 aa	Predicted RBP	14.05	□□□□□ -0.16
KRIT1-223	ENST00000487168	NINL	Q9Y2I6	1382 aa		14.05	□□□□□ -0.16
KRIT1-223	ENST00000487168	PPIP5K1	Q6PFW1	1433 aa		14.05	□□□□□ -0.16
KRIT1-223	ENST00000487168	SRPK2	P78362	688 aa	Known RBP	14.04	□□□□□ -0.16
KRIT1-223	ENST00000487168	PMFBP1	Q8TBY8	1022 aa		14.04	□□□□□ -0.16
KRIT1-223	ENST00000487168	PCGF6	Q9BYE7	350 aa		14.04	□□□□□ -0.16
KRIT1-223	ENST00000487168	SLIT2	O94813	1529 aa		14.04	□□□□□ -0.16
KRIT1-223	ENST00000487168	XPC	Q01831	940 aa	Predicted RBP	14.03	□□□□□ -0.16
KRIT1-223	ENST00000487168	NGLY1	Q96IV0	654 aa		14.03	□□□□□ -0.16
KRIT1-223	ENST00000487168	C8orf37	Q96NL8	207 aa		14.03	□□□□□ -0.16
KRIT1-223	ENST00000487168	CRYBG1	Q9Y4K1	1723 aa		14.03	□□□□□ -0.16
KRIT1-223	ENST00000487168	ATRN	O75882	1429 aa		14.02	□□□□□ -0.16
KRIT1-223	ENST00000487168	ACE	P12821	1306 aa		14.02	□□□□□ -0.17
KRIT1-223	ENST00000487168	TRPC5	Q9UL62	973 aa	Predicted RBP	14.02	□□□□□ -0.17
KRIT1-223	ENST00000487168	BCL9L	Q86UU0	1499 aa		14.01	□□□□□ -0.17
KRIT1-223	ENST00000487168	USP6	P35125	1406 aa		14.01	□□□□□ -0.17
KRIT1-223	ENST00000487168	RXRB	P28702	533 aa		14.01	□□□□□ -0.17
KRIT1-223	ENST00000487168	RBM6	P78332	1123 aa	Known RBP	14.01	□□□□□ -0.17
KRIT1-223	ENST00000487168	ZNF692	Q9BU19	519 aa	Predicted RBP	14.01	□□□□□ -0.17
KRIT1-223	ENST00000487168	SSH2	Q76I76	1423 aa		14	□□□□□ -0.17
KRIT1-223	ENST00000487168	ADAMTS2	O95450	1211 aa		14	□□□□□ -0.17
KRIT1-223	ENST00000487168	CPSF1	Q10570	1443 aa	Known RBP	13.99	□□□□□ -0.17
KRIT1-223	ENST00000487168	COL14A1	Q05707	1796 aa	Known RBP	13.99	□□□□□ -0.17
KRIT1-223	ENST00000487168	SP7	Q8TDD2	431 aa	Predicted RBP	13.99	□□□□□ -0.17
KRIT1-223	ENST00000487168	USP21	Q9UK80	565 aa		13.99	□□□□□ -0.17
KRIT1-223	ENST00000487168	CPD	O75976	1380 aa		13.98	□□□□□ -0.17
KRIT1-223	ENST00000487168	USP19	O94966	1318 aa		13.98	□□□□□ -0.17
KRIT1-223	ENST00000487168	QTRT2	Q9H974	415 aa	Known RBP	13.98	□□□□□ -0.17
KRIT1-223	ENST00000487168	CABP2	Q9NPB3	220 aa		13.98	□□□□□ -0.17
KRIT1-223	ENST00000487168	AKAP12	Q02952	1782 aa		13.98	□□□□□ -0.17
KRIT1-223	ENST00000487168	EP400	Q96L91	3159 aa		13.97	□□□□□ -0.17
KRIT1-223	ENST00000487168	TTC21A	Q8NDW8	1320 aa		13.97	□□□□□ -0.17
KRIT1-223	ENST00000487168	SPDYE2B	A6NHP3	402 aa		13.97	□□□□□ -0.17
KRIT1-223	ENST00000487168	SPDYE6	P0CI01	402 aa		13.97	□□□□□ -0.17
KRIT1-223	ENST00000487168	HAP1	P54257	671 aa	Predicted RBP	13.97	□□□□□ -0.17
KRIT1-223	ENST00000487168	SPDYE2	Q495Y8	402 aa		13.97	□□□□□ -0.17
KRIT1-223	ENST00000487168	UNC5CL	Q8IV45	518 aa		13.97	□□□□□ -0.17
KRIT1-223	ENST00000487168	TESK2	Q96S53	571 aa		13.97	□□□□□ -0.17
KRIT1-223	ENST00000487168	PLCH1	Q4KWH8	1693 aa		13.97	□□□□□ -0.17
KRIT1-223	ENST00000487168	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.97	□□□□□ -0.17
KRIT1-223	ENST00000487168	USP47	Q96K76	1375 aa		13.96	□□□□□ -0.17
KRIT1-223	ENST00000487168	CDCA8	Q53HL2	280 aa		13.96	□□□□□ -0.17
KRIT1-223	ENST00000487168	CABP1	Q9NZU7	370 aa		13.96	□□□□□ -0.17
KRIT1-223	ENST00000487168	NRK	Q7Z2Y5	1582 aa		13.96	□□□□□ -0.18
KRIT1-223	ENST00000487168	MON2	Q7Z3U7	1717 aa		13.95	□□□□□ -0.18
KRIT1-223	ENST00000487168	USP54	Q70EL1	1684 aa		13.95	□□□□□ -0.18
KRIT1-223	ENST00000487168	PAK3	O75914	559 aa	Predicted RBP	13.95	□□□□□ -0.18
KRIT1-223	ENST00000487168	NLRP13	Q86W25	1043 aa		13.95	□□□□□ -0.18
KRIT1-223	ENST00000487168	SLIT3	O75094	1523 aa		13.95	□□□□□ -0.18
KRIT1-223	ENST00000487168	ABCC6	O95255	1503 aa		13.95	□□□□□ -0.18
KRIT1-223	ENST00000487168	VPS72	Q15906	364 aa		13.94	□□□□□ -0.18
KRIT1-223	ENST00000487168	LMOD2	Q6P5Q4	547 aa		13.94	□□□□□ -0.18
KRIT1-223	ENST00000487168	CCER1	Q8TC90	406 aa	Predicted RBP	13.94	□□□□□ -0.18
KRIT1-223	ENST00000487168	NRAP	Q86VF7	1730 aa		13.93	□□□□□ -0.18
KRIT1-223	ENST00000487168	FXR2	P51116	673 aa	Known RBP eCLIP	13.93	□□□□□ -0.18
KRIT1-223	ENST00000487168	ABTB2	Q8N961	1025 aa		13.93	□□□□□ -0.18
KRIT1-223	ENST00000487168	GJD4	Q96KN9	370 aa	Predicted RBP	13.93	□□□□□ -0.18
KRIT1-223	ENST00000487168	RGS12	O14924	1447 aa		13.92	□□□□□ -0.18
KRIT1-223	ENST00000487168	EDC4	Q6P2E9	1401 aa	Known RBP	13.92	□□□□□ -0.18
KRIT1-223	ENST00000487168	ST20-MTHFS	A0A0A6YYL1	179 aa		13.92	□□□□□ -0.18
KRIT1-223	ENST00000487168	HAX1	O00165	279 aa		13.92	□□□□□ -0.18
KRIT1-223	ENST00000487168	TERF2IP	Q9NYB0	399 aa		13.92	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms