RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 TSR2Q969E8 191 aaKnown RBP15.84■□□□□ 0.13
PTCD2-204ENST00000486995 PNPLA6Q8IY17 1366 aa15.84■□□□□ 0.13
PTCD2-204ENST00000486995 SLC4A3P48751 1232 aa15.83■□□□□ 0.13
PTCD2-204ENST00000486995 MAPK8IP3Q9UPT6 1336 aa15.83■□□□□ 0.12
PTCD2-204ENST00000486995 NEFMP07197 916 aa15.83■□□□□ 0.12
PTCD2-204ENST00000486995 CT47B1P0C2W7 299 aaPredicted RBP15.83■□□□□ 0.12
PTCD2-204ENST00000486995 ANKRD26Q9UPS8 1709 aa15.83■□□□□ 0.12
PTCD2-204ENST00000486995 AGLP35573 1532 aa15.83■□□□□ 0.12
PTCD2-204ENST00000486995 USP35Q9P2H5 1018 aa15.82■□□□□ 0.12
PTCD2-204ENST00000486995 A2ML1A8K2U0 1454 aa15.82■□□□□ 0.12
PTCD2-204ENST00000486995 DIP2BQ9P265 1576 aa15.82■□□□□ 0.12
PTCD2-204ENST00000486995 REREQ9P2R6 1566 aa15.82■□□□□ 0.12
PTCD2-204ENST00000486995 DIAPH1O60610 1272 aaKnown RBP15.81■□□□□ 0.12
PTCD2-204ENST00000486995 WAPLQ7Z5K2 1190 aa15.81■□□□□ 0.12
PTCD2-204ENST00000486995 EXOSC9Q06265 439 aaKnown RBP15.81■□□□□ 0.12
PTCD2-204ENST00000486995 ZKSCAN2Q63HK3 967 aa15.81■□□□□ 0.12
PTCD2-204ENST00000486995 MVPQ14764 893 aaKnown RBP15.81■□□□□ 0.12
PTCD2-204ENST00000486995 IL16Q14005 1332 aa15.8■□□□□ 0.12
PTCD2-204ENST00000486995 DLC1Q96QB1 1528 aa15.8■□□□□ 0.12
PTCD2-204ENST00000486995 USP19O94966 1318 aa15.79■□□□□ 0.12
PTCD2-204ENST00000486995 RIPK4P57078 832 aa15.79■□□□□ 0.12
PTCD2-204ENST00000486995 RIMS2Q9UQ26 1411 aa15.79■□□□□ 0.12
PTCD2-204ENST00000486995 SPATA31D1Q6ZQQ2 1576 aa15.79■□□□□ 0.12
PTCD2-204ENST00000486995 DZIP1LQ8IYY4 767 aaKnown RBP15.79■□□□□ 0.12
PTCD2-204ENST00000486995 SEC24BO95487 1268 aa15.78■□□□□ 0.12
PTCD2-204ENST00000486995 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.78■□□□□ 0.12
PTCD2-204ENST00000486995 SSH1Q8WYL5 1049 aa15.78■□□□□ 0.12
PTCD2-204ENST00000486995 RWDD1Q9H446 243 aaPredicted RBP15.78■□□□□ 0.12
PTCD2-204ENST00000486995 SMC4Q9NTJ3 1288 aa15.78■□□□□ 0.12
PTCD2-204ENST00000486995 DAXXQ9UER7 740 aaPredicted RBP15.78■□□□□ 0.12
PTCD2-204ENST00000486995 FBLN1P23142 703 aa15.77■□□□□ 0.12
PTCD2-204ENST00000486995 PNNQ9H307 717 aaKnown RBP15.77■□□□□ 0.12
PTCD2-204ENST00000486995 PDZRN3Q9UPQ7 1066 aa15.77■□□□□ 0.12
PTCD2-204ENST00000486995 FCHSD2O94868 740 aa15.77■□□□□ 0.11
PTCD2-204ENST00000486995 FTSJ3Q8IY81 847 aaKnown RBP15.77■□□□□ 0.11
PTCD2-204ENST00000486995 POLKQ9UBT6 870 aa15.77■□□□□ 0.11
PTCD2-204ENST00000486995 TSPOAP1O95153 1857 aa15.76■□□□□ 0.11
PTCD2-204ENST00000486995 TRIM27P14373 513 aa15.76■□□□□ 0.11
PTCD2-204ENST00000486995 MLECQ14165 292 aa15.76■□□□□ 0.11
PTCD2-204ENST00000486995 ATP7BP35670 1465 aa15.76■□□□□ 0.11
PTCD2-204ENST00000486995 RIMBP3CA6NJZ7 1639 aa15.75■□□□□ 0.11
PTCD2-204ENST00000486995 RIMBP3BA6NNM3 1639 aa15.75■□□□□ 0.11
PTCD2-204ENST00000486995 RIMBP3Q9UFD9 1639 aa15.75■□□□□ 0.11
PTCD2-204ENST00000486995 SETD1AO15047 1707 aaKnown RBP15.75■□□□□ 0.11
PTCD2-204ENST00000486995 KIF20BQ96Q89 1820 aa15.75■□□□□ 0.11
PTCD2-204ENST00000486995 VIRMAQ69YN4 1812 aaKnown RBP15.75■□□□□ 0.11
PTCD2-204ENST00000486995 RSPH6AQ9H0K4 717 aa15.74■□□□□ 0.11
PTCD2-204ENST00000486995 ZMYM3Q14202 1370 aa15.74■□□□□ 0.11
PTCD2-204ENST00000486995 CDC42BPGQ6DT37 1551 aa15.74■□□□□ 0.11
PTCD2-204ENST00000486995 ATF7IPQ6VMQ6 1270 aa15.74■□□□□ 0.11
PTCD2-204ENST00000486995 NOB1Q9ULX3 412 aaKnown RBP15.73■□□□□ 0.11
PTCD2-204ENST00000486995 CPSF1Q10570 1443 aaKnown RBP15.72■□□□□ 0.11
PTCD2-204ENST00000486995 METP08581 1390 aa15.72■□□□□ 0.11
PTCD2-204ENST00000486995 WASLO00401 505 aaPredicted RBP15.72■□□□□ 0.11
PTCD2-204ENST00000486995 PRKAR2BP31323 418 aa15.72■□□□□ 0.11
PTCD2-204ENST00000486995 NFKBIBQ15653 356 aa15.72■□□□□ 0.11
PTCD2-204ENST00000486995 LRRC7Q96NW7 1537 aa15.72■□□□□ 0.11
PTCD2-204ENST00000486995 FAM135BQ49AJ0 1406 aa15.71■□□□□ 0.11
PTCD2-204ENST00000486995 NRXN3Q9Y4C0 1643 aa15.71■□□□□ 0.11
PTCD2-204ENST00000486995 DDX19BQ9UMR2 479 aa15.71■□□□□ 0.11
PTCD2-204ENST00000486995 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.7■□□□□ 0.1
PTCD2-204ENST00000486995 HDAC1Q13547 482 aaPredicted RBP15.7■□□□□ 0.1
PTCD2-204ENST00000486995 ITPRIPQ8IWB1 547 aa15.7■□□□□ 0.1
PTCD2-204ENST00000486995 PHACTR3Q96KR7 559 aa15.7■□□□□ 0.1
PTCD2-204ENST00000486995 PPIP5K1Q6PFW1 1433 aa15.7■□□□□ 0.1
PTCD2-204ENST00000486995 TXNDC2Q86VQ3 553 aa15.69■□□□□ 0.1
PTCD2-204ENST00000486995 EMILIN1Q9Y6C2 1016 aa15.69■□□□□ 0.1
PTCD2-204ENST00000486995 EDC4Q6P2E9 1401 aaKnown RBP15.69■□□□□ 0.1
PTCD2-204ENST00000486995 NME9Q86XW9 330 aa15.69■□□□□ 0.1
PTCD2-204ENST00000486995 TMEM57Q8N5G2 664 aa15.69■□□□□ 0.1
PTCD2-204ENST00000486995 HMOX1P09601 288 aa15.68■□□□□ 0.1
PTCD2-204ENST00000486995 IL13P35225 146 aa15.68■□□□□ 0.1
PTCD2-204ENST00000486995 ALDH1L2Q3SY69 923 aa15.68■□□□□ 0.1
PTCD2-204ENST00000486995 ZRANB1Q9UGI0 708 aa15.68■□□□□ 0.1
PTCD2-204ENST00000486995 NFE2L2Q16236 605 aa15.68■□□□□ 0.1
PTCD2-204ENST00000486995 KIF16BQ96L93 1317 aa15.68■□□□□ 0.1
PTCD2-204ENST00000486995 NUDT16Q96DE0 195 aaKnown RBP15.67■□□□□ 0.1
PTCD2-204ENST00000486995 ZBTB40Q9NUA8 1239 aa15.67■□□□□ 0.1
PTCD2-204ENST00000486995 IPO8O15397 1037 aaKnown RBP15.67■□□□□ 0.1
PTCD2-204ENST00000486995 SIRT1Q96EB6 747 aa15.67■□□□□ 0.1
PTCD2-204ENST00000486995 MAP2P11137 1827 aaKnown RBP15.67■□□□□ 0.1
PTCD2-204ENST00000486995 NCKAP5LQ9HCH0 1330 aa15.67■□□□□ 0.1
PTCD2-204ENST00000486995 AATKQ6ZMQ8 1374 aa15.66■□□□□ 0.1
PTCD2-204ENST00000486995 BRPF1P55201 1214 aaPredicted RBP15.65■□□□□ 0.1
PTCD2-204ENST00000486995 CCDC61Q9Y6R9 512 aa15.65■□□□□ 0.1
PTCD2-204ENST00000486995 SMC5Q8IY18 1101 aa15.65■□□□□ 0.1
PTCD2-204ENST00000486995 TBC1D32Q96NH3 1257 aa15.65■□□□□ 0.1
PTCD2-204ENST00000486995 THUMPD2Q9BTF0 503 aaKnown RBP15.65■□□□□ 0.1
PTCD2-204ENST00000486995 TECPR2O15040 1411 aa15.65■□□□□ 0.1
PTCD2-204ENST00000486995 ZNF428Q96B54 188 aa15.64■□□□□ 0.1
PTCD2-204ENST00000486995 ESF1Q9H501 851 aaKnown RBP15.64■□□□□ 0.09
PTCD2-204ENST00000486995 CDK12Q9NYV4 1490 aaPredicted RBP15.64■□□□□ 0.09
PTCD2-204ENST00000486995 VAMP4O75379 141 aa15.64■□□□□ 0.09
PTCD2-204ENST00000486995 CPS1P31327 1500 aa15.63■□□□□ 0.09
PTCD2-204ENST00000486995 HDGFP51858 240 aaKnown RBP15.63■□□□□ 0.09
PTCD2-204ENST00000486995 COG3Q96JB2 828 aa15.63■□□□□ 0.09
PTCD2-204ENST00000486995 UPF2Q9HAU5 1272 aaKnown RBP15.63■□□□□ 0.09
PTCD2-204ENST00000486995 ZNF853P0CG23 659 aa15.63■□□□□ 0.09
PTCD2-204ENST00000486995 CALD1Q05682 793 aaKnown RBP15.62■□□□□ 0.09
PTCD2-204ENST00000486995 BECN1Q14457 450 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms