RNA–Protein interactions for RNA: ENST00000486229.5

NBPF3-212, Transcript of NBPF member 3, humanhuman

TSL 3

Gene NBPF3, Length 933 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-212ENST00000486229 SBNO1A3KN83 1393 aa31.47■■■□□ 2.63
NBPF3-212ENST00000486229 KTN1Q86UP2 1357 aaKnown RBP31.47■■■□□ 2.63
NBPF3-212ENST00000486229 WASHC2AQ641Q2 1341 aa31.47■■■□□ 2.63
NBPF3-212ENST00000486229 ZNF772Q68DY9 489 aaPredicted RBP31.46■■■□□ 2.63
NBPF3-212ENST00000486229 PXDNQ92626 1479 aa31.46■■■□□ 2.63
NBPF3-212ENST00000486229 USP6P35125 1406 aa31.45■■■□□ 2.63
NBPF3-212ENST00000486229 MON2Q7Z3U7 1717 aa31.44■■■□□ 2.62
NBPF3-212ENST00000486229 ZNF316A6NFI3 1004 aaPredicted RBP31.44■■■□□ 2.62
NBPF3-212ENST00000486229 A0A1W2PP64 1363 aa31.43■■■□□ 2.62
NBPF3-212ENST00000486229 TTC21AQ8NDW8 1320 aa31.41■■■□□ 2.62
NBPF3-212ENST00000486229 ARHGEF10O15013 1369 aa31.41■■■□□ 2.62
NBPF3-212ENST00000486229 EDC4Q6P2E9 1401 aaKnown RBP31.41■■■□□ 2.62
NBPF3-212ENST00000486229 CD163L1Q9NR16 1453 aa31.4■■■□□ 2.62
NBPF3-212ENST00000486229 PAK3O75914 559 aaPredicted RBP31.4■■■□□ 2.62
NBPF3-212ENST00000486229 DDX17Q92841 729 aaKnown RBP31.4■■■□□ 2.62
NBPF3-212ENST00000486229 XPCQ01831 940 aaPredicted RBP31.39■■■□□ 2.62
NBPF3-212ENST00000486229 TNS3Q68CZ2 1445 aa31.39■■■□□ 2.62
NBPF3-212ENST00000486229 TRPM3Q9HCF6 1732 aaPredicted RBP31.38■■■□□ 2.61
NBPF3-212ENST00000486229 CDK12Q9NYV4 1490 aaPredicted RBP31.38■■■□□ 2.61
NBPF3-212ENST00000486229 SPATA31A3Q5VYP0 1347 aa31.37■■■□□ 2.61
NBPF3-212ENST00000486229 PANK3Q9H999 370 aa31.35■■■□□ 2.61
NBPF3-212ENST00000486229 TTC21BQ7Z4L5 1316 aa31.34■■■□□ 2.61
NBPF3-212ENST00000486229 NRKQ7Z2Y5 1582 aa31.34■■■□□ 2.61
NBPF3-212ENST00000486229 SSH2Q76I76 1423 aa31.33■■■□□ 2.61
NBPF3-212ENST00000486229 MEX3CQ5U5Q3 659 aaKnown RBP31.33■■■□□ 2.61
NBPF3-212ENST00000486229 LMOD2Q6P5Q4 547 aa31.33■■■□□ 2.61
NBPF3-212ENST00000486229 SRCAPQ6ZRS2 3230 aa31.32■■■□□ 2.6
NBPF3-212ENST00000486229 RXRBP28702 533 aa31.32■■■□□ 2.6
NBPF3-212ENST00000486229 ABTB2Q8N961 1025 aa31.32■■■□□ 2.6
NBPF3-212ENST00000486229 ALS2Q96Q42 1657 aa31.31■■■□□ 2.6
NBPF3-212ENST00000486229 KNSTRNQ9Y448 316 aa31.3■■■□□ 2.6
NBPF3-212ENST00000486229 CGNL1Q0VF96 1302 aa31.29■■■□□ 2.6
NBPF3-212ENST00000486229 NLRP13Q86W25 1043 aa31.29■■■□□ 2.6
NBPF3-212ENST00000486229 NSD3Q9BZ95 1437 aa31.28■■■□□ 2.6
NBPF3-212ENST00000486229 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.27■■■□□ 2.6
NBPF3-212ENST00000486229 COL22A1Q8NFW1 1626 aaPredicted RBP31.25■■■□□ 2.59
NBPF3-212ENST00000486229 PNPLA6Q8IY17 1366 aa31.25■■■□□ 2.59
NBPF3-212ENST00000486229 CARD14Q9BXL6 1004 aa31.24■■■□□ 2.59
NBPF3-212ENST00000486229 KIF20BQ96Q89 1820 aa31.24■■■□□ 2.59
NBPF3-212ENST00000486229 NLRP6P59044 892 aa31.23■■■□□ 2.59
NBPF3-212ENST00000486229 NSD2O96028 1365 aa31.22■■■□□ 2.59
NBPF3-212ENST00000486229 USP31Q70CQ4 1352 aa31.21■■■□□ 2.59
NBPF3-212ENST00000486229 HAP1P54257 671 aaPredicted RBP31.21■■■□□ 2.59
NBPF3-212ENST00000486229 PIK3C2AO00443 1686 aa31.21■■■□□ 2.59
NBPF3-212ENST00000486229 AFF2P51816 1311 aa31.2■■■□□ 2.58
NBPF3-212ENST00000486229 COG3Q96JB2 828 aa31.19■■■□□ 2.58
NBPF3-212ENST00000486229 USP54Q70EL1 1684 aa31.19■■■□□ 2.58
NBPF3-212ENST00000486229 DDX10Q13206 875 aaKnown RBP31.18■■■□□ 2.58
NBPF3-212ENST00000486229 NME9Q86XW9 330 aa31.17■■■□□ 2.58
NBPF3-212ENST00000486229 KCNH5Q8NCM2 988 aa31.17■■■□□ 2.58
NBPF3-212ENST00000486229 NUTM2BA6NNL0 878 aaPredicted RBP31.16■■■□□ 2.58
NBPF3-212ENST00000486229 NUTM2EB1AL46 878 aaPredicted RBP31.16■■■□□ 2.58
NBPF3-212ENST00000486229 NUTM2AQ8IVF1 878 aaPredicted RBP31.16■■■□□ 2.58
NBPF3-212ENST00000486229 FYB1O15117 783 aa31.15■■■□□ 2.58
NBPF3-212ENST00000486229 RGS12O14924 1447 aa31.15■■■□□ 2.58
NBPF3-212ENST00000486229 PER1O15534 1290 aaPredicted RBP31.14■■■□□ 2.58
NBPF3-212ENST00000486229 NUTM2GQ5VZR2 741 aa31.14■■■□□ 2.58
NBPF3-212ENST00000486229 USP19O94966 1318 aa31.14■■■□□ 2.58
NBPF3-212ENST00000486229 NPC1L1Q9UHC9 1359 aa31.14■■■□□ 2.58
NBPF3-212ENST00000486229 ANKRD26Q9UPS8 1709 aa31.12■■■□□ 2.57
NBPF3-212ENST00000486229 OVOS2A0A0J9YW53 1432 aa31.11■■■□□ 2.57
NBPF3-212ENST00000486229 OVOS2Q6IE36 1432 aa31.11■■■□□ 2.57
NBPF3-212ENST00000486229 GGNBP2Q9H3C7 697 aa31.1■■■□□ 2.57
NBPF3-212ENST00000486229 PHRF1Q9P1Y6 1649 aaKnown RBP31.09■■■□□ 2.57
NBPF3-212ENST00000486229 SLIT3O75094 1523 aa31.09■■■□□ 2.57
NBPF3-212ENST00000486229 ABCA3Q99758 1704 aa31.09■■■□□ 2.57
NBPF3-212ENST00000486229 CRYBG1Q9Y4K1 1723 aa31.09■■■□□ 2.57
NBPF3-212ENST00000486229 RBM6P78332 1123 aaKnown RBP31.08■■■□□ 2.57
NBPF3-212ENST00000486229 GCP02774 474 aa31.07■■■□□ 2.56
NBPF3-212ENST00000486229 AMER1Q5JTC6 1135 aaPredicted RBP31.07■■■□□ 2.56
NBPF3-212ENST00000486229 QTRT2Q9H974 415 aaKnown RBP31.06■■■□□ 2.56
NBPF3-212ENST00000486229 MARF1Q9Y4F3 1742 aaKnown RBP31.05■■■□□ 2.56
NBPF3-212ENST00000486229 CABLES1Q8TDN4 633 aa31.05■■■□□ 2.56
NBPF3-212ENST00000486229 PLEKHG5O94827 1062 aa31.04■■■□□ 2.56
NBPF3-212ENST00000486229 MORC1Q86VD1 984 aa31.04■■■□□ 2.56
NBPF3-212ENST00000486229 ZRANB1Q9UGI0 708 aa31.02■■■□□ 2.56
NBPF3-212ENST00000486229 C8orf37Q96NL8 207 aa31.01■■■□□ 2.55
NBPF3-212ENST00000486229 CPDO75976 1380 aa31■■■□□ 2.55
NBPF3-212ENST00000486229 CC2D1BQ5T0F9 858 aaKnown RBP30.99■■■□□ 2.55
NBPF3-212ENST00000486229 AATKQ6ZMQ8 1374 aa30.97■■■□□ 2.55
NBPF3-212ENST00000486229 ADAMTS2O95450 1211 aa30.97■■■□□ 2.55
NBPF3-212ENST00000486229 PRDM11Q9NQV5 511 aa30.97■■■□□ 2.55
NBPF3-212ENST00000486229 EP400Q96L91 3159 aa30.97■■■□□ 2.55
NBPF3-212ENST00000486229 SOX12O15370 315 aa30.96■■■□□ 2.55
NBPF3-212ENST00000486229 NFAT5O94916 1531 aa30.96■■■□□ 2.55
NBPF3-212ENST00000486229 ZC3H6P61129 1189 aaKnown RBP30.95■■■□□ 2.55
NBPF3-212ENST00000486229 COL14A1Q05707 1796 aaKnown RBP30.94■■■□□ 2.54
NBPF3-212ENST00000486229 ABCC6O95255 1503 aa30.93■■■□□ 2.54
NBPF3-212ENST00000486229 KIF24Q5T7B8 1368 aa30.93■■■□□ 2.54
NBPF3-212ENST00000486229 KIAA0232Q92628 1395 aa30.93■■■□□ 2.54
NBPF3-212ENST00000486229 RALBP1Q15311 655 aa30.92■■■□□ 2.54
NBPF3-212ENST00000486229 ARHGEF25Q86VW2 580 aa30.92■■■□□ 2.54
NBPF3-212ENST00000486229 LTN1O94822 1766 aa30.92■■■□□ 2.54
NBPF3-212ENST00000486229 MAP2P11137 1827 aaKnown RBP30.9■■■□□ 2.54
NBPF3-212ENST00000486229 NGLY1Q96IV0 654 aa30.9■■■□□ 2.54
NBPF3-212ENST00000486229 RTL1A6NKG5 1358 aa30.89■■■□□ 2.54
NBPF3-212ENST00000486229 ZBTB7CA1YPR0 619 aa30.88■■■□□ 2.53
NBPF3-212ENST00000486229 AMPHP49418 695 aa30.88■■■□□ 2.53
NBPF3-212ENST00000486229 TNNT2P45379 298 aaPredicted RBP30.87■■■□□ 2.53
NBPF3-212ENST00000486229 NWD2Q9ULI1 1742 aa30.87■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms