RNA–Protein interactions for RNA: ENST00000486018.1

TPM2-206, Transcript of tropomyosin 2, humanhuman

TSL 2

Gene TPM2, Length 699 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-206ENST00000486018 CCDC7Q96M83 1385 aa21.82■■□□□ 1.08
TPM2-206ENST00000486018 ACEP12821 1306 aa21.81■■□□□ 1.08
TPM2-206ENST00000486018 QTRT2Q9H974 415 aaKnown RBP21.81■■□□□ 1.08
TPM2-206ENST00000486018 NPHP3Q7Z494 1330 aa21.8■■□□□ 1.08
TPM2-206ENST00000486018 SSH2Q76I76 1423 aa21.8■■□□□ 1.08
TPM2-206ENST00000486018 CDK12Q9NYV4 1490 aaPredicted RBP21.79■■□□□ 1.08
TPM2-206ENST00000486018 NGDNQ8NEJ9 315 aaKnown RBP21.78■■□□□ 1.08
TPM2-206ENST00000486018 AKAP12Q02952 1782 aa21.78■■□□□ 1.08
TPM2-206ENST00000486018 TMC1Q8TDI8 760 aa21.77■■□□□ 1.08
TPM2-206ENST00000486018 NGLY1Q96IV0 654 aa21.77■■□□□ 1.08
TPM2-206ENST00000486018 A0A1W2PP64 1363 aa21.76■■□□□ 1.07
TPM2-206ENST00000486018 ANKRD36BQ8N2N9 1353 aa21.76■■□□□ 1.07
TPM2-206ENST00000486018 USP6P35125 1406 aa21.76■■□□□ 1.07
TPM2-206ENST00000486018 ZNF692Q9BU19 519 aaPredicted RBP21.76■■□□□ 1.07
TPM2-206ENST00000486018 TRPM3Q9HCF6 1732 aaPredicted RBP21.76■■□□□ 1.07
TPM2-206ENST00000486018 BRD4O60885 1362 aaPredicted RBP21.75■■□□□ 1.07
TPM2-206ENST00000486018 KRT28Q7Z3Y7 464 aa21.75■■□□□ 1.07
TPM2-206ENST00000486018 MON2Q7Z3U7 1717 aa21.75■■□□□ 1.07
TPM2-206ENST00000486018 SBNO1A3KN83 1393 aa21.74■■□□□ 1.07
TPM2-206ENST00000486018 RBM6P78332 1123 aaKnown RBP21.74■■□□□ 1.07
TPM2-206ENST00000486018 PSME1Q06323 249 aa21.74■■□□□ 1.07
TPM2-206ENST00000486018 TERF2IPQ9NYB0 399 aa21.74■■□□□ 1.07
TPM2-206ENST00000486018 XPCQ01831 940 aaPredicted RBP21.73■■□□□ 1.07
TPM2-206ENST00000486018 NRKQ7Z2Y5 1582 aa21.73■■□□□ 1.07
TPM2-206ENST00000486018 HDGFL2Q7Z4V5 671 aaPredicted RBP21.71■■□□□ 1.07
TPM2-206ENST00000486018 POLR3GLQ9BT43 218 aa21.71■■□□□ 1.07
TPM2-206ENST00000486018 CARD14Q9BXL6 1004 aa21.71■■□□□ 1.07
TPM2-206ENST00000486018 SPATA31A3Q5VYP0 1347 aa21.71■■□□□ 1.07
TPM2-206ENST00000486018 KTN1Q86UP2 1357 aaKnown RBP21.71■■□□□ 1.07
TPM2-206ENST00000486018 RGS12O14924 1447 aa21.71■■□□□ 1.07
TPM2-206ENST00000486018 EDC4Q6P2E9 1401 aaKnown RBP21.7■■□□□ 1.06
TPM2-206ENST00000486018 ALS2Q96Q42 1657 aa21.69■■□□□ 1.06
TPM2-206ENST00000486018 USP21Q9UK80 565 aa21.69■■□□□ 1.06
TPM2-206ENST00000486018 TNS3Q68CZ2 1445 aa21.69■■□□□ 1.06
TPM2-206ENST00000486018 ZNF316A6NFI3 1004 aaPredicted RBP21.68■■□□□ 1.06
TPM2-206ENST00000486018 PANK3Q9H999 370 aa21.68■■□□□ 1.06
TPM2-206ENST00000486018 TTC21BQ7Z4L5 1316 aa21.68■■□□□ 1.06
TPM2-206ENST00000486018 FNBP4Q8N3X1 1017 aaPredicted RBP21.66■■□□□ 1.06
TPM2-206ENST00000486018 TTC21AQ8NDW8 1320 aa21.65■■□□□ 1.06
TPM2-206ENST00000486018 PER1O15534 1290 aaPredicted RBP21.65■■□□□ 1.06
TPM2-206ENST00000486018 COL22A1Q8NFW1 1626 aaPredicted RBP21.63■■□□□ 1.05
TPM2-206ENST00000486018 TRPC5Q9UL62 973 aaPredicted RBP21.63■■□□□ 1.05
TPM2-206ENST00000486018 PIK3C2AO00443 1686 aa21.63■■□□□ 1.05
TPM2-206ENST00000486018 ARHGEF10O15013 1369 aa21.62■■□□□ 1.05
TPM2-206ENST00000486018 NSD3Q9BZ95 1437 aa21.62■■□□□ 1.05
TPM2-206ENST00000486018 USP31Q70CQ4 1352 aa21.61■■□□□ 1.05
TPM2-206ENST00000486018 USP54Q70EL1 1684 aa21.61■■□□□ 1.05
TPM2-206ENST00000486018 PAK3O75914 559 aaPredicted RBP21.6■■□□□ 1.05
TPM2-206ENST00000486018 FYB1O15117 783 aa21.59■■□□□ 1.05
TPM2-206ENST00000486018 ATRNO75882 1429 aa21.59■■□□□ 1.05
TPM2-206ENST00000486018 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.59■■□□□ 1.05
TPM2-206ENST00000486018 ABTB2Q8N961 1025 aa21.59■■□□□ 1.05
TPM2-206ENST00000486018 MARF1Q9Y4F3 1742 aaKnown RBP21.59■■□□□ 1.05
TPM2-206ENST00000486018 USP19O94966 1318 aa21.58■■□□□ 1.05
TPM2-206ENST00000486018 CRYBG1Q9Y4K1 1723 aa21.58■■□□□ 1.05
TPM2-206ENST00000486018 NME9Q86XW9 330 aa21.58■■□□□ 1.05
TPM2-206ENST00000486018 BCL9LQ86UU0 1499 aa21.58■■□□□ 1.04
TPM2-206ENST00000486018 OVOS2A0A0J9YW53 1432 aa21.57■■□□□ 1.04
TPM2-206ENST00000486018 OVOS2Q6IE36 1432 aa21.57■■□□□ 1.04
TPM2-206ENST00000486018 AMER1Q5JTC6 1135 aaPredicted RBP21.56■■□□□ 1.04
TPM2-206ENST00000486018 ZRANB1Q9UGI0 708 aa21.56■■□□□ 1.04
TPM2-206ENST00000486018 SLIT3O75094 1523 aa21.55■■□□□ 1.04
TPM2-206ENST00000486018 CGNL1Q0VF96 1302 aa21.55■■□□□ 1.04
TPM2-206ENST00000486018 PLEKHG5O94827 1062 aa21.54■■□□□ 1.04
TPM2-206ENST00000486018 DDX10Q13206 875 aaKnown RBP21.54■■□□□ 1.04
TPM2-206ENST00000486018 NLRP13Q86W25 1043 aa21.54■■□□□ 1.04
TPM2-206ENST00000486018 NPC1L1Q9UHC9 1359 aa21.53■■□□□ 1.04
TPM2-206ENST00000486018 ABCA3Q99758 1704 aa21.53■■□□□ 1.04
TPM2-206ENST00000486018 NLRP6P59044 892 aa21.53■■□□□ 1.04
TPM2-206ENST00000486018 NUTM2GQ5VZR2 741 aa21.53■■□□□ 1.04
TPM2-206ENST00000486018 LMOD2Q6P5Q4 547 aa21.53■■□□□ 1.04
TPM2-206ENST00000486018 KNSTRNQ9Y448 316 aa21.53■■□□□ 1.04
TPM2-206ENST00000486018 KIF20BQ96Q89 1820 aa21.52■■□□□ 1.04
TPM2-206ENST00000486018 CABLES1Q8TDN4 633 aa21.52■■□□□ 1.04
TPM2-206ENST00000486018 GJD4Q96KN9 370 aaPredicted RBP21.52■■□□□ 1.04
TPM2-206ENST00000486018 NSD2O96028 1365 aa21.51■■□□□ 1.03
TPM2-206ENST00000486018 PHRF1Q9P1Y6 1649 aaKnown RBP21.51■■□□□ 1.03
TPM2-206ENST00000486018 GGNBP2Q9H3C7 697 aa21.5■■□□□ 1.03
TPM2-206ENST00000486018 UNC5CLQ8IV45 518 aa21.49■■□□□ 1.03
TPM2-206ENST00000486018 NFAT5O94916 1531 aa21.48■■□□□ 1.03
TPM2-206ENST00000486018 ANKRD26Q9UPS8 1709 aa21.47■■□□□ 1.03
TPM2-206ENST00000486018 GCP02774 474 aa21.47■■□□□ 1.03
TPM2-206ENST00000486018 COG3Q96JB2 828 aa21.47■■□□□ 1.03
TPM2-206ENST00000486018 SLIT2O94813 1529 aa21.45■■□□□ 1.02
TPM2-206ENST00000486018 CPDO75976 1380 aa21.45■■□□□ 1.02
TPM2-206ENST00000486018 EP400Q96L91 3159 aa21.44■■□□□ 1.02
TPM2-206ENST00000486018 KCNH5Q8NCM2 988 aa21.44■■□□□ 1.02
TPM2-206ENST00000486018 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.43■■□□□ 1.02
TPM2-206ENST00000486018 HAP1P54257 671 aaPredicted RBP21.43■■□□□ 1.02
TPM2-206ENST00000486018 GLI3P10071 1580 aa21.42■■□□□ 1.02
TPM2-206ENST00000486018 SRCAPQ6ZRS2 3230 aa21.42■■□□□ 1.02
TPM2-206ENST00000486018 AATKQ6ZMQ8 1374 aa21.41■■□□□ 1.02
TPM2-206ENST00000486018 ARHGEF25Q86VW2 580 aa21.41■■□□□ 1.02
TPM2-206ENST00000486018 KIAA0232Q92628 1395 aa21.39■■□□□ 1.02
TPM2-206ENST00000486018 FAM83GA6ND36 823 aa21.39■■□□□ 1.01
TPM2-206ENST00000486018 FBLN1P23142 703 aa21.39■■□□□ 1.01
TPM2-206ENST00000486018 CC2D1BQ5T0F9 858 aaKnown RBP21.39■■□□□ 1.01
TPM2-206ENST00000486018 ZC3H6P61129 1189 aaKnown RBP21.38■■□□□ 1.01
TPM2-206ENST00000486018 MORC1Q86VD1 984 aa21.38■■□□□ 1.01
TPM2-206ENST00000486018 VPS72Q15906 364 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms