RNA–Protein interactions for RNA: ENST00000485962.5

SGSM3-213, Transcript of small G protein signaling modulator 3, humanhuman

TSL 5

Gene SGSM3, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-213ENST00000485962 USP32Q8NFA0 1604 aa15.7■□□□□ 0.1
SGSM3-213ENST00000485962 SRPK2P78362 688 aaKnown RBP15.69■□□□□ 0.1
SGSM3-213ENST00000485962 FAM69CQ0P6D2 419 aa15.69■□□□□ 0.1
SGSM3-213ENST00000485962 CCDC27Q2M243 656 aa15.69■□□□□ 0.1
SGSM3-213ENST00000485962 FTSJ3Q8IY81 847 aaKnown RBP15.69■□□□□ 0.1
SGSM3-213ENST00000485962 IPO4Q8TEX9 1081 aaKnown RBP15.69■□□□□ 0.1
SGSM3-213ENST00000485962 ABCC3O15438 1527 aa15.69■□□□□ 0.1
SGSM3-213ENST00000485962 USP19O94966 1318 aa15.69■□□□□ 0.1
SGSM3-213ENST00000485962 MLH3Q9UHC1 1453 aa15.69■□□□□ 0.1
SGSM3-213ENST00000485962 CFAP74Q9C0B2 1584 aa15.68■□□□□ 0.1
SGSM3-213ENST00000485962 RAPGEF3O95398 923 aa15.68■□□□□ 0.1
SGSM3-213ENST00000485962 CFAP44Q96MT7 982 aa15.68■□□□□ 0.1
SGSM3-213ENST00000485962 UPF2Q9HAU5 1272 aaKnown RBP15.68■□□□□ 0.1
SGSM3-213ENST00000485962 ARHGEF28Q8N1W1 1705 aaKnown RBP15.68■□□□□ 0.1
SGSM3-213ENST00000485962 TULP4Q9NRJ4 1543 aa15.68■□□□□ 0.1
SGSM3-213ENST00000485962 BECN1Q14457 450 aa15.68■□□□□ 0.1
SGSM3-213ENST00000485962 RWDD1Q9H446 243 aaPredicted RBP15.68■□□□□ 0.1
SGSM3-213ENST00000485962 PDZRN3Q9UPQ7 1066 aa15.68■□□□□ 0.1
SGSM3-213ENST00000485962 NSD2O96028 1365 aa15.67■□□□□ 0.1
SGSM3-213ENST00000485962 HSP90AA2PQ14568 343 aaPredicted RBP15.67■□□□□ 0.1
SGSM3-213ENST00000485962 TSR2Q969E8 191 aaKnown RBP15.67■□□□□ 0.1
SGSM3-213ENST00000485962 CAMSAP1Q5T5Y3 1602 aa15.67■□□□□ 0.1
SGSM3-213ENST00000485962 GGNBP2Q9H3C7 697 aa15.67■□□□□ 0.1
SGSM3-213ENST00000485962 KCNA4P22459 653 aa15.66■□□□□ 0.1
SGSM3-213ENST00000485962 PLCD3Q8N3E9 789 aa15.66■□□□□ 0.1
SGSM3-213ENST00000485962 ZKSCAN2Q63HK3 967 aa15.66■□□□□ 0.1
SGSM3-213ENST00000485962 SIGLEC1Q9BZZ2 1709 aa15.66■□□□□ 0.1
SGSM3-213ENST00000485962 CDK11BP21127 795 aaKnown RBP15.66■□□□□ 0.1
SGSM3-213ENST00000485962 SLKQ9H2G2 1235 aaPredicted RBP15.65■□□□□ 0.1
SGSM3-213ENST00000485962 SMC4Q9NTJ3 1288 aa15.65■□□□□ 0.1
SGSM3-213ENST00000485962 MVPQ14764 893 aaKnown RBP15.65■□□□□ 0.1
SGSM3-213ENST00000485962 PUS7Q96PZ0 661 aaKnown RBP15.65■□□□□ 0.1
SGSM3-213ENST00000485962 DZIP1LQ8IYY4 767 aaKnown RBP15.64■□□□□ 0.09
SGSM3-213ENST00000485962 A0A1W2PP64 1363 aa15.64■□□□□ 0.09
SGSM3-213ENST00000485962 NEXMIFQ5QGS0 1516 aa15.64■□□□□ 0.09
SGSM3-213ENST00000485962 IDI1Q13907 227 aa15.63■□□□□ 0.09
SGSM3-213ENST00000485962 PRDM10Q9NQV6 1147 aa15.63■□□□□ 0.09
SGSM3-213ENST00000485962 EXOSC9Q06265 439 aaKnown RBP15.63■□□□□ 0.09
SGSM3-213ENST00000485962 CNPY4Q8N129 248 aa15.63■□□□□ 0.09
SGSM3-213ENST00000485962 MINK1Q8N4C8 1332 aaPredicted RBP15.63■□□□□ 0.09
SGSM3-213ENST00000485962 TMPOP42166 694 aaKnown RBP15.62■□□□□ 0.09
SGSM3-213ENST00000485962 POGKQ9P215 609 aa15.61■□□□□ 0.09
SGSM3-213ENST00000485962 ITPRIPQ8IWB1 547 aa15.61■□□□□ 0.09
SGSM3-213ENST00000485962 RIMBP3CA6NJZ7 1639 aa15.61■□□□□ 0.09
SGSM3-213ENST00000485962 RIMBP3BA6NNM3 1639 aa15.61■□□□□ 0.09
SGSM3-213ENST00000485962 ABCC11Q96J66 1382 aa15.61■□□□□ 0.09
SGSM3-213ENST00000485962 RIMBP3Q9UFD9 1639 aa15.61■□□□□ 0.09
SGSM3-213ENST00000485962 ADGRB2O60241 1585 aa15.6■□□□□ 0.09
SGSM3-213ENST00000485962 TERF2IPQ9NYB0 399 aa15.6■□□□□ 0.09
SGSM3-213ENST00000485962 PIK3C2BO00750 1634 aa15.6■□□□□ 0.09
SGSM3-213ENST00000485962 NLRP1Q9C000 1473 aa15.6■□□□□ 0.09
SGSM3-213ENST00000485962 PRDM4Q9UKN5 801 aa15.6■□□□□ 0.09
SGSM3-213ENST00000485962 TRHP20396 242 aaPredicted RBP15.59■□□□□ 0.09
SGSM3-213ENST00000485962 PRAM1Q96QH2 718 aa15.59■□□□□ 0.09
SGSM3-213ENST00000485962 CT47B1P0C2W7 299 aaPredicted RBP15.59■□□□□ 0.09
SGSM3-213ENST00000485962 TRIM27P14373 513 aa15.59■□□□□ 0.09
SGSM3-213ENST00000485962 SSH1Q8WYL5 1049 aa15.59■□□□□ 0.09
SGSM3-213ENST00000485962 PLEKHF1Q96S99 279 aa15.59■□□□□ 0.09
SGSM3-213ENST00000485962 PPP6R1Q9UPN7 881 aa15.59■□□□□ 0.09
SGSM3-213ENST00000485962 RIPK4P57078 832 aa15.58■□□□□ 0.09
SGSM3-213ENST00000485962 TBC1D32Q96NH3 1257 aa15.58■□□□□ 0.09
SGSM3-213ENST00000485962 MYO5BQ9ULV0 1848 aa15.58■□□□□ 0.08
SGSM3-213ENST00000485962 TRIM35Q9UPQ4 493 aa15.58■□□□□ 0.08
SGSM3-213ENST00000485962 FYB1O15117 783 aa15.57■□□□□ 0.08
SGSM3-213ENST00000485962 SLC52A1Q9NWF4 448 aa15.57■□□□□ 0.08
SGSM3-213ENST00000485962 KCNG1Q9UIX4 513 aa15.57■□□□□ 0.08
SGSM3-213ENST00000485962 ATAD2Q6PL18 1390 aa15.57■□□□□ 0.08
SGSM3-213ENST00000485962 BCCIPQ9P287 314 aaKnown RBP eCLIP15.57■□□□□ 0.08
SGSM3-213ENST00000485962 NOB1Q9ULX3 412 aaKnown RBP15.57■□□□□ 0.08
SGSM3-213ENST00000485962 DDX19BQ9UMR2 479 aa15.57■□□□□ 0.08
SGSM3-213ENST00000485962 DIAPH1O60610 1272 aaKnown RBP15.56■□□□□ 0.08
SGSM3-213ENST00000485962 ATF7IPQ6VMQ6 1270 aa15.56■□□□□ 0.08
SGSM3-213ENST00000485962 ZMYM3Q14202 1370 aa15.56■□□□□ 0.08
SGSM3-213ENST00000485962 HDGFL2Q7Z4V5 671 aaPredicted RBP15.56■□□□□ 0.08
SGSM3-213ENST00000485962 DIP2CQ9Y2E4 1556 aa15.56■□□□□ 0.08
SGSM3-213ENST00000485962 SPRYD3Q8NCJ5 442 aa15.55■□□□□ 0.08
SGSM3-213ENST00000485962 MFAP1P55081 439 aaKnown RBP15.55■□□□□ 0.08
SGSM3-213ENST00000485962 TBC1D2Q9BYX2 928 aa15.55■□□□□ 0.08
SGSM3-213ENST00000485962 STAG3Q9UJ98 1225 aa15.54■□□□□ 0.08
SGSM3-213ENST00000485962 TMEM57Q8N5G2 664 aa15.54■□□□□ 0.08
SGSM3-213ENST00000485962 NEO1Q92859 1461 aa15.53■□□□□ 0.08
SGSM3-213ENST00000485962 PNNQ9H307 717 aaKnown RBP15.53■□□□□ 0.08
SGSM3-213ENST00000485962 COL3A1P02461 1466 aaPredicted RBP15.53■□□□□ 0.08
SGSM3-213ENST00000485962 ARHGAP31Q2M1Z3 1444 aa15.53■□□□□ 0.08
SGSM3-213ENST00000485962 TEX2Q8IWB9 1127 aa15.52■□□□□ 0.08
SGSM3-213ENST00000485962 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.52■□□□□ 0.08
SGSM3-213ENST00000485962 CDK19Q9BWU1 502 aa15.52■□□□□ 0.08
SGSM3-213ENST00000485962 CABP1Q9NZU7 370 aa15.52■□□□□ 0.08
SGSM3-213ENST00000485962 ZFYVE9O95405 1425 aa15.52■□□□□ 0.08
SGSM3-213ENST00000485962 PTPRMP28827 1452 aa15.52■□□□□ 0.08
SGSM3-213ENST00000485962 IGSF3O75054 1194 aa15.52■□□□□ 0.07
SGSM3-213ENST00000485962 HDAC1Q13547 482 aaPredicted RBP15.52■□□□□ 0.07
SGSM3-213ENST00000485962 YTHDC2Q9H6S0 1430 aaKnown RBP15.52■□□□□ 0.07
SGSM3-213ENST00000485962 IL16Q14005 1332 aa15.51■□□□□ 0.07
SGSM3-213ENST00000485962 IPO8O15397 1037 aaKnown RBP15.51■□□□□ 0.07
SGSM3-213ENST00000485962 C22orf23Q9BZE7 217 aa15.51■□□□□ 0.07
SGSM3-213ENST00000485962 ANKRD26Q9UPS8 1709 aa15.51■□□□□ 0.07
SGSM3-213ENST00000485962 KIF16BQ96L93 1317 aa15.51■□□□□ 0.07
SGSM3-213ENST00000485962 RRP9O43818 475 aaKnown RBP15.51■□□□□ 0.07
SGSM3-213ENST00000485962 YEATS2Q9ULM3 1422 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms