RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 USP32Q8NFA0 1604 aa15.65■□□□□ 0.1
CCDC78-213ENST00000482878 ESPNB1AK53 854 aa15.65■□□□□ 0.1
CCDC78-213ENST00000482878 CFAP65Q6ZU64 1925 aaKnown RBP15.65■□□□□ 0.1
CCDC78-213ENST00000482878 NCBP3Q53F19 620 aaKnown RBP15.64■□□□□ 0.09
CCDC78-213ENST00000482878 ESF1Q9H501 851 aaKnown RBP15.64■□□□□ 0.09
CCDC78-213ENST00000482878 PPLO60437 1756 aa15.64■□□□□ 0.09
CCDC78-213ENST00000482878 TULP4Q9NRJ4 1543 aa15.64■□□□□ 0.09
CCDC78-213ENST00000482878 SRPK2P78362 688 aaKnown RBP15.63■□□□□ 0.09
CCDC78-213ENST00000482878 EXOSC9Q06265 439 aaKnown RBP15.63■□□□□ 0.09
CCDC78-213ENST00000482878 PUS7Q96PZ0 661 aaKnown RBP15.63■□□□□ 0.09
CCDC78-213ENST00000482878 SMC4Q9NTJ3 1288 aa15.63■□□□□ 0.09
CCDC78-213ENST00000482878 NSD2O96028 1365 aa15.63■□□□□ 0.09
CCDC78-213ENST00000482878 U2SURPO15042 1029 aaKnown RBP15.62■□□□□ 0.09
CCDC78-213ENST00000482878 TRIM27P14373 513 aa15.62■□□□□ 0.09
CCDC78-213ENST00000482878 PLEKHF1Q96S99 279 aa15.62■□□□□ 0.09
CCDC78-213ENST00000482878 PDCL3Q9H2J4 239 aa15.62■□□□□ 0.09
CCDC78-213ENST00000482878 FRMPD1Q5SYB0 1578 aa15.62■□□□□ 0.09
CCDC78-213ENST00000482878 CD109Q6YHK3 1445 aa15.62■□□□□ 0.09
CCDC78-213ENST00000482878 TRIM35Q9UPQ4 493 aa15.62■□□□□ 0.09
CCDC78-213ENST00000482878 SSH1Q8WYL5 1049 aa15.61■□□□□ 0.09
CCDC78-213ENST00000482878 GGNBP2Q9H3C7 697 aa15.61■□□□□ 0.09
CCDC78-213ENST00000482878 GLI2P10070 1586 aa15.61■□□□□ 0.09
CCDC78-213ENST00000482878 NUTM2FA1L443 756 aa15.61■□□□□ 0.09
CCDC78-213ENST00000482878 TMPOP42166 694 aaKnown RBP15.61■□□□□ 0.09
CCDC78-213ENST00000482878 ADGRB2O60241 1585 aa15.61■□□□□ 0.09
CCDC78-213ENST00000482878 CT47B1P0C2W7 299 aaPredicted RBP15.6■□□□□ 0.09
CCDC78-213ENST00000482878 A0A1W2PP64 1363 aa15.6■□□□□ 0.09
CCDC78-213ENST00000482878 VGFO15240 615 aaPredicted RBP15.6■□□□□ 0.09
CCDC78-213ENST00000482878 TPM2P07951 284 aa15.6■□□□□ 0.09
CCDC78-213ENST00000482878 ITPRIPQ8IWB1 547 aa15.59■□□□□ 0.09
CCDC78-213ENST00000482878 SOX12O15370 315 aa15.59■□□□□ 0.09
CCDC78-213ENST00000482878 MRE11P49959 708 aa15.59■□□□□ 0.09
CCDC78-213ENST00000482878 POGZQ7Z3K3 1410 aa15.58■□□□□ 0.09
CCDC78-213ENST00000482878 MFAP1P55081 439 aaKnown RBP15.58■□□□□ 0.09
CCDC78-213ENST00000482878 ABCC3O15438 1527 aa15.58■□□□□ 0.08
CCDC78-213ENST00000482878 FAM69CQ0P6D2 419 aa15.58■□□□□ 0.08
CCDC78-213ENST00000482878 HDAC1Q13547 482 aaPredicted RBP15.58■□□□□ 0.08
CCDC78-213ENST00000482878 ATF7IPQ6VMQ6 1270 aa15.58■□□□□ 0.08
CCDC78-213ENST00000482878 C22orf23Q9BZE7 217 aa15.58■□□□□ 0.08
CCDC78-213ENST00000482878 NOB1Q9ULX3 412 aaKnown RBP15.58■□□□□ 0.08
CCDC78-213ENST00000482878 ABCC11Q96J66 1382 aa15.58■□□□□ 0.08
CCDC78-213ENST00000482878 KIAA1211Q6ZU35 1233 aa15.58■□□□□ 0.08
CCDC78-213ENST00000482878 TRAK2O60296 914 aa15.57■□□□□ 0.08
CCDC78-213ENST00000482878 DDX19BQ9UMR2 479 aa15.57■□□□□ 0.08
CCDC78-213ENST00000482878 MINK1Q8N4C8 1332 aaPredicted RBP15.57■□□□□ 0.08
CCDC78-213ENST00000482878 MLH3Q9UHC1 1453 aa15.57■□□□□ 0.08
CCDC78-213ENST00000482878 HECW2Q9P2P5 1572 aa15.56■□□□□ 0.08
CCDC78-213ENST00000482878 MCM4P33991 863 aa15.56■□□□□ 0.08
CCDC78-213ENST00000482878 TMEM57Q8N5G2 664 aa15.56■□□□□ 0.08
CCDC78-213ENST00000482878 GRPEL1Q9HAV7 217 aa15.56■□□□□ 0.08
CCDC78-213ENST00000482878 FAM13BQ9NYF5 915 aa15.56■□□□□ 0.08
CCDC78-213ENST00000482878 ARHGEF28Q8N1W1 1705 aaKnown RBP15.56■□□□□ 0.08
CCDC78-213ENST00000482878 FYB1O15117 783 aa15.55■□□□□ 0.08
CCDC78-213ENST00000482878 COL3A1P02461 1466 aaPredicted RBP15.55■□□□□ 0.08
CCDC78-213ENST00000482878 NEXMIFQ5QGS0 1516 aa15.55■□□□□ 0.08
CCDC78-213ENST00000482878 RIPK4P57078 832 aa15.55■□□□□ 0.08
CCDC78-213ENST00000482878 IDI1Q13907 227 aa15.55■□□□□ 0.08
CCDC78-213ENST00000482878 SMC5Q8IY18 1101 aa15.55■□□□□ 0.08
CCDC78-213ENST00000482878 ERBB4Q15303 1308 aa15.55■□□□□ 0.08
CCDC78-213ENST00000482878 CALD1Q05682 793 aaKnown RBP15.54■□□□□ 0.08
CCDC78-213ENST00000482878 FSD2A1L4K1 749 aa15.54■□□□□ 0.08
CCDC78-213ENST00000482878 ZBTB40Q9NUA8 1239 aa15.53■□□□□ 0.08
CCDC78-213ENST00000482878 CAMSAP1Q5T5Y3 1602 aa15.53■□□□□ 0.08
CCDC78-213ENST00000482878 SIGLEC1Q9BZZ2 1709 aa15.53■□□□□ 0.08
CCDC78-213ENST00000482878 IL16Q14005 1332 aa15.52■□□□□ 0.08
CCDC78-213ENST00000482878 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.52■□□□□ 0.08
CCDC78-213ENST00000482878 FBXO31Q5XUX0 539 aaPredicted RBP15.51■□□□□ 0.07
CCDC78-213ENST00000482878 DIAPH1O60610 1272 aaKnown RBP15.51■□□□□ 0.07
CCDC78-213ENST00000482878 PRAM1Q96QH2 718 aa15.5■□□□□ 0.07
CCDC78-213ENST00000482878 TERF2IPQ9NYB0 399 aa15.5■□□□□ 0.07
CCDC78-213ENST00000482878 CHMP5Q9NZZ3 219 aa15.5■□□□□ 0.07
CCDC78-213ENST00000482878 PIK3C2BO00750 1634 aa15.5■□□□□ 0.07
CCDC78-213ENST00000482878 CD163L1Q9NR16 1453 aa15.49■□□□□ 0.07
CCDC78-213ENST00000482878 KIF16BQ96L93 1317 aa15.49■□□□□ 0.07
CCDC78-213ENST00000482878 LNPKQ9C0E8 428 aa15.49■□□□□ 0.07
CCDC78-213ENST00000482878 NUCB1Q02818 461 aa15.48■□□□□ 0.07
CCDC78-213ENST00000482878 ANP32BQ92688 251 aaKnown RBP15.48■□□□□ 0.07
CCDC78-213ENST00000482878 ATAD2Q6PL18 1390 aa15.48■□□□□ 0.07
CCDC78-213ENST00000482878 IPO8O15397 1037 aaKnown RBP15.48■□□□□ 0.07
CCDC78-213ENST00000482878 FBLN1P23142 703 aa15.48■□□□□ 0.07
CCDC78-213ENST00000482878 MSNP26038 577 aaKnown RBP15.48■□□□□ 0.07
CCDC78-213ENST00000482878 PNPLA6Q8IY17 1366 aa15.47■□□□□ 0.07
CCDC78-213ENST00000482878 ZHX1Q9UKY1 873 aaPredicted RBP15.47■□□□□ 0.07
CCDC78-213ENST00000482878 PTPRMP28827 1452 aa15.47■□□□□ 0.07
CCDC78-213ENST00000482878 ZNF692Q9BU19 519 aaPredicted RBP15.47■□□□□ 0.07
CCDC78-213ENST00000482878 HSCBQ8IWL3 235 aa15.47■□□□□ 0.07
CCDC78-213ENST00000482878 PRDM10Q9NQV6 1147 aa15.47■□□□□ 0.07
CCDC78-213ENST00000482878 PRDM4Q9UKN5 801 aa15.47■□□□□ 0.07
CCDC78-213ENST00000482878 ZFYVE9O95405 1425 aa15.46■□□□□ 0.07
CCDC78-213ENST00000482878 MED14O60244 1454 aa15.46■□□□□ 0.07
CCDC78-213ENST00000482878 ALDH1L2Q3SY69 923 aa15.46■□□□□ 0.07
CCDC78-213ENST00000482878 CHD1LQ86WJ1 897 aa15.46■□□□□ 0.07
CCDC78-213ENST00000482878 CABP1Q9NZU7 370 aa15.45■□□□□ 0.06
CCDC78-213ENST00000482878 R3HCC1Q9Y3T6 440 aaKnown RBP15.45■□□□□ 0.06
CCDC78-213ENST00000482878 SLC52A1Q9NWF4 448 aa15.45■□□□□ 0.06
CCDC78-213ENST00000482878 PRKAR2BP31323 418 aa15.45■□□□□ 0.06
CCDC78-213ENST00000482878 RBM25P49756 843 aaKnown RBP15.45■□□□□ 0.06
CCDC78-213ENST00000482878 FGD1P98174 961 aa15.45■□□□□ 0.06
CCDC78-213ENST00000482878 FCHSD2O94868 740 aa15.44■□□□□ 0.06
CCDC78-213ENST00000482878 HDGFL2Q7Z4V5 671 aaPredicted RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms