RNA–Protein interactions for RNA: ENST00000482563.1

RBM39-233, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-233ENST00000482563 CDCA7LQ96GN5 454 aa10.5□□□□□ -0.73
RBM39-233ENST00000482563 BRPF3Q9ULD4 1205 aa10.5□□□□□ -0.73
RBM39-233ENST00000482563 NOP9Q86U38 636 aaKnown RBP10.49□□□□□ -0.73
RBM39-233ENST00000482563 FAM200AQ8TCP9 573 aa10.49□□□□□ -0.73
RBM39-233ENST00000482563 ASB16Q96NS5 453 aa10.49□□□□□ -0.73
RBM39-233ENST00000482563 MKRN1Q9UHC7 482 aaKnown RBP10.49□□□□□ -0.73
RBM39-233ENST00000482563 SKIP12755 728 aa10.48□□□□□ -0.73
RBM39-233ENST00000482563 ZNF211Q13398 564 aaPredicted RBP10.48□□□□□ -0.73
RBM39-233ENST00000482563 SLF2Q8IX21 1173 aa10.48□□□□□ -0.73
RBM39-233ENST00000482563 JPH4Q96JJ6 628 aa10.48□□□□□ -0.73
RBM39-233ENST00000482563 SLC34A2O95436 690 aa10.47□□□□□ -0.73
RBM39-233ENST00000482563 C1orf216Q8TAB5 229 aa10.47□□□□□ -0.73
RBM39-233ENST00000482563 GPATCH3Q96I76 525 aa10.47□□□□□ -0.73
RBM39-233ENST00000482563 CDCA7Q9BWT1 371 aaPredicted RBP10.47□□□□□ -0.73
RBM39-233ENST00000482563 SBNO2Q9Y2G9 1366 aa10.47□□□□□ -0.73
RBM39-233ENST00000482563 ZNF592Q92610 1267 aa10.47□□□□□ -0.73
RBM39-233ENST00000482563 TINF2Q9BSI4 451 aa10.47□□□□□ -0.73
RBM39-233ENST00000482563 ANO2Q9NQ90 1003 aa10.47□□□□□ -0.73
RBM39-233ENST00000482563 H3BRB1 525 aa10.46□□□□□ -0.74
RBM39-233ENST00000482563 RAB11FIP3O75154 756 aa10.46□□□□□ -0.74
RBM39-233ENST00000482563 MTMR2Q13614 643 aa10.46□□□□□ -0.74
RBM39-233ENST00000482563 MICAL1Q8TDZ2 1067 aa10.46□□□□□ -0.74
RBM39-233ENST00000482563 UBE2Q2Q8WVN8 375 aa10.46□□□□□ -0.74
RBM39-233ENST00000482563 TANGO6Q9C0B7 1094 aa10.46□□□□□ -0.74
RBM39-233ENST00000482563 OCEL1Q9H607 264 aa10.46□□□□□ -0.74
RBM39-233ENST00000482563 TUT1Q9H6E5 874 aaKnown RBP10.46□□□□□ -0.74
RBM39-233ENST00000482563 KDM4FA0A1W2PPD8 638 aa10.45□□□□□ -0.74
RBM39-233ENST00000482563 G3V3G9 751 aa10.45□□□□□ -0.74
RBM39-233ENST00000482563 SCAMP3O14828 347 aaKnown RBP10.45□□□□□ -0.74
RBM39-233ENST00000482563 MAPK1P28482 360 aa10.45□□□□□ -0.74
RBM39-233ENST00000482563 METTL16Q86W50 562 aaKnown RBP10.45□□□□□ -0.74
RBM39-233ENST00000482563 ANKMY2Q8IV38 441 aa10.45□□□□□ -0.74
RBM39-233ENST00000482563 DHX38Q92620 1227 aaKnown RBP10.45□□□□□ -0.74
RBM39-233ENST00000482563 EGFL7Q9UHF1 273 aa10.45□□□□□ -0.74
RBM39-233ENST00000482563 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.45□□□□□ -0.74
RBM39-233ENST00000482563 ICMTO60725 284 aa10.44□□□□□ -0.74
RBM39-233ENST00000482563 RASA1P20936 1047 aa10.44□□□□□ -0.74
RBM39-233ENST00000482563 FOSBP53539 338 aa10.44□□□□□ -0.74
RBM39-233ENST00000482563 NR1H3Q13133 447 aa10.44□□□□□ -0.74
RBM39-233ENST00000482563 CUEDC1Q9NWM3 386 aaPredicted RBP10.44□□□□□ -0.74
RBM39-233ENST00000482563 PER1O15534 1290 aaPredicted RBP10.44□□□□□ -0.74
RBM39-233ENST00000482563 LZTS3O60299 673 aaPredicted RBP10.44□□□□□ -0.74
RBM39-233ENST00000482563 ABL1P00519 1130 aa10.44□□□□□ -0.74
RBM39-233ENST00000482563 FBXO45P0C2W1 286 aa10.44□□□□□ -0.74
RBM39-233ENST00000482563 CC2D2BQ6DHV5 1058 aa10.44□□□□□ -0.74
RBM39-233ENST00000482563 LARGE2Q8N3Y3 721 aa10.44□□□□□ -0.74
RBM39-233ENST00000482563 TMEM134Q9H6X4 195 aa10.44□□□□□ -0.74
RBM39-233ENST00000482563 TLDC2A0PJX2 215 aa10.43□□□□□ -0.74
RBM39-233ENST00000482563 USP46P62068 366 aa10.43□□□□□ -0.74
RBM39-233ENST00000482563 LARP1Q6PKG0 1096 aaKnown RBP10.43□□□□□ -0.74
RBM39-233ENST00000482563 TAS1R3Q7RTX0 852 aa10.42□□□□□ -0.74
RBM39-233ENST00000482563 TMA7Q9Y2S6 64 aaKnown RBP10.42□□□□□ -0.74
RBM39-233ENST00000482563 GCGRP47871 477 aa10.41□□□□□ -0.74
RBM39-233ENST00000482563 COL19A1Q14993 1142 aa10.41□□□□□ -0.74
RBM39-233ENST00000482563 SWI5Q1ZZU3 235 aa10.41□□□□□ -0.74
RBM39-233ENST00000482563 CCDC144BQ3MJ40 725 aa10.41□□□□□ -0.74
RBM39-233ENST00000482563 EGFLAMQ63HQ2 1017 aa10.41□□□□□ -0.74
RBM39-233ENST00000482563 RDH13Q8NBN7 331 aa10.41□□□□□ -0.74
RBM39-233ENST00000482563 PNMA1Q8ND90 353 aa10.41□□□□□ -0.74
RBM39-233ENST00000482563 DCTN4Q9UJW0 460 aa10.41□□□□□ -0.74
RBM39-233ENST00000482563 DNAJB2P25686 324 aa10.41□□□□□ -0.74
RBM39-233ENST00000482563 DPYDQ12882 1025 aa10.41□□□□□ -0.74
RBM39-233ENST00000482563 NCOA4Q13772 614 aa10.41□□□□□ -0.74
RBM39-233ENST00000482563 PIF1Q9H611 641 aa10.41□□□□□ -0.74
RBM39-233ENST00000482563 PRKAG2Q9UGJ0 569 aa10.41□□□□□ -0.74
RBM39-233ENST00000482563 ARHGAP4P98171 946 aa10.4□□□□□ -0.74
RBM39-233ENST00000482563 OCLNQ16625 522 aa10.4□□□□□ -0.74
RBM39-233ENST00000482563 EAPPQ56P03 285 aaPredicted RBP10.4□□□□□ -0.74
RBM39-233ENST00000482563 TMED8Q6PL24 325 aaPredicted RBP10.4□□□□□ -0.74
RBM39-233ENST00000482563 NT5DC4Q86YG4 428 aa10.4□□□□□ -0.74
RBM39-233ENST00000482563 TBX22Q9Y458 520 aa10.4□□□□□ -0.74
RBM39-233ENST00000482563 ADAM33Q9BZ11 813 aa10.39□□□□□ -0.75
RBM39-233ENST00000482563 GLYCTKQ8IVS8 523 aa10.38□□□□□ -0.75
RBM39-233ENST00000482563 NLGN1Q8N2Q7 840 aa10.38□□□□□ -0.75
RBM39-233ENST00000482563 PPME1Q9Y570 386 aa10.38□□□□□ -0.75
RBM39-233ENST00000482563 PRMT3O60678 531 aa10.38□□□□□ -0.75
RBM39-233ENST00000482563 NUDT18Q6ZVK8 323 aa10.38□□□□□ -0.75
RBM39-233ENST00000482563 SUGT1Q9Y2Z0 365 aa10.38□□□□□ -0.75
RBM39-233ENST00000482563 ATP5J2-PTCD1G3V325 749 aa10.37□□□□□ -0.75
RBM39-233ENST00000482563 P4HBP07237 508 aaKnown RBP10.37□□□□□ -0.75
RBM39-233ENST00000482563 KCNH2Q12809 1159 aa10.37□□□□□ -0.75
RBM39-233ENST00000482563 SDE2Q6IQ49 451 aa10.37□□□□□ -0.75
RBM39-233ENST00000482563 ZDHHC16Q969W1 377 aa10.37□□□□□ -0.75
RBM39-233ENST00000482563 SPACA7Q96KW9 195 aa10.37□□□□□ -0.75
RBM39-233ENST00000482563 PSMD1Q99460 953 aa10.37□□□□□ -0.75
RBM39-233ENST00000482563 SLC52A1Q9NWF4 448 aa10.37□□□□□ -0.75
RBM39-233ENST00000482563 TSKSQ9UJT2 592 aa10.37□□□□□ -0.75
RBM39-233ENST00000482563 LOC102724159A0A0B4J2E5 919 aa10.36□□□□□ -0.75
RBM39-233ENST00000482563 DKK1O94907 266 aa10.36□□□□□ -0.75
RBM39-233ENST00000482563 CLDN10P78369 228 aa10.36□□□□□ -0.75
RBM39-233ENST00000482563 PWP2Q15269 919 aaKnown RBP10.36□□□□□ -0.75
RBM39-233ENST00000482563 SLC43A3Q8NBI5 491 aa10.36□□□□□ -0.75
RBM39-233ENST00000482563 CXXC1Q9P0U4 656 aaPredicted RBP10.36□□□□□ -0.75
RBM39-233ENST00000482563 IQSEC3Q9UPP2 1182 aaPredicted RBP10.36□□□□□ -0.75
RBM39-233ENST00000482563 RIPOR2Q9Y4F9 1068 aa10.36□□□□□ -0.75
RBM39-233ENST00000482563 C21orf2O43822 256 aa10.36□□□□□ -0.75
RBM39-233ENST00000482563 ZSCAN29Q8IWY8 852 aaPredicted RBP10.36□□□□□ -0.75
RBM39-233ENST00000482563 RGL4Q8IZJ4 473 aa10.36□□□□□ -0.75
RBM39-233ENST00000482563 PCDHGA4Q9Y5G9 962 aa10.36□□□□□ -0.75
RBM39-233ENST00000482563 ATN1P54259 1190 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms