RNA–Protein interactions for RNA: ENST00000481699.1

SHISA4-203, Transcript of shisa family member 4, humanhuman

TSL 3

Gene SHISA4, Length 723 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-203ENST00000481699 AKAP12Q02952 1782 aa31.64■■■□□ 2.66
SHISA4-203ENST00000481699 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.62■■■□□ 2.65
SHISA4-203ENST00000481699 CARD14Q9BXL6 1004 aa31.62■■■□□ 2.65
SHISA4-203ENST00000481699 TTC21BQ7Z4L5 1316 aa31.6■■■□□ 2.65
SHISA4-203ENST00000481699 MON2Q7Z3U7 1717 aa31.6■■■□□ 2.65
SHISA4-203ENST00000481699 CGNL1Q0VF96 1302 aa31.59■■■□□ 2.65
SHISA4-203ENST00000481699 TTC21AQ8NDW8 1320 aa31.59■■■□□ 2.65
SHISA4-203ENST00000481699 LMOD2Q6P5Q4 547 aa31.59■■■□□ 2.65
SHISA4-203ENST00000481699 NHSL1Q5SYE7 1610 aa31.59■■■□□ 2.65
SHISA4-203ENST00000481699 AHDC1Q5TGY3 1603 aaPredicted RBP31.59■■■□□ 2.65
SHISA4-203ENST00000481699 SOS2Q07890 1332 aaPredicted RBP31.58■■■□□ 2.65
SHISA4-203ENST00000481699 PXDNQ92626 1479 aa31.58■■■□□ 2.65
SHISA4-203ENST00000481699 SBNO1A3KN83 1393 aa31.57■■■□□ 2.64
SHISA4-203ENST00000481699 ABTB2Q8N961 1025 aa31.54■■■□□ 2.64
SHISA4-203ENST00000481699 PHLPP1O60346 1717 aa31.53■■■□□ 2.64
SHISA4-203ENST00000481699 SSH2Q76I76 1423 aa31.53■■■□□ 2.64
SHISA4-203ENST00000481699 LRRC59Q96AG4 307 aaKnown RBP31.53■■■□□ 2.64
SHISA4-203ENST00000481699 PER1O15534 1290 aaPredicted RBP31.52■■■□□ 2.64
SHISA4-203ENST00000481699 NRKQ7Z2Y5 1582 aa31.51■■■□□ 2.64
SHISA4-203ENST00000481699 TNS3Q68CZ2 1445 aa31.51■■■□□ 2.64
SHISA4-203ENST00000481699 RGS17Q9UGC6 210 aaPredicted RBP31.51■■■□□ 2.63
SHISA4-203ENST00000481699 SPATA31A3Q5VYP0 1347 aa31.5■■■□□ 2.63
SHISA4-203ENST00000481699 CNGB1Q14028 1251 aaPredicted RBP31.5■■■□□ 2.63
SHISA4-203ENST00000481699 NME9Q86XW9 330 aa31.5■■■□□ 2.63
SHISA4-203ENST00000481699 ARHGEF10O15013 1369 aa31.5■■■□□ 2.63
SHISA4-203ENST00000481699 TRPM3Q9HCF6 1732 aaPredicted RBP31.49■■■□□ 2.63
SHISA4-203ENST00000481699 NSD2O96028 1365 aa31.47■■■□□ 2.63
SHISA4-203ENST00000481699 NLRP6P59044 892 aa31.47■■■□□ 2.63
SHISA4-203ENST00000481699 NUTM2GQ5VZR2 741 aa31.47■■■□□ 2.63
SHISA4-203ENST00000481699 COG3Q96JB2 828 aa31.47■■■□□ 2.63
SHISA4-203ENST00000481699 GGNBP2Q9H3C7 697 aa31.47■■■□□ 2.63
SHISA4-203ENST00000481699 FYB1O15117 783 aa31.46■■■□□ 2.63
SHISA4-203ENST00000481699 CC2D1BQ5T0F9 858 aaKnown RBP31.46■■■□□ 2.63
SHISA4-203ENST00000481699 NLRP13Q86W25 1043 aa31.46■■■□□ 2.63
SHISA4-203ENST00000481699 AMER1Q5JTC6 1135 aaPredicted RBP31.45■■■□□ 2.63
SHISA4-203ENST00000481699 COL16A1Q07092 1604 aaPredicted RBP31.43■■■□□ 2.62
SHISA4-203ENST00000481699 PLEKHG5O94827 1062 aa31.43■■■□□ 2.62
SHISA4-203ENST00000481699 KIF20BQ96Q89 1820 aa31.42■■■□□ 2.62
SHISA4-203ENST00000481699 NPC1L1Q9UHC9 1359 aa31.42■■■□□ 2.62
SHISA4-203ENST00000481699 MORC1Q86VD1 984 aa31.41■■■□□ 2.62
SHISA4-203ENST00000481699 ZRANB1Q9UGI0 708 aa31.41■■■□□ 2.62
SHISA4-203ENST00000481699 PIK3C2AO00443 1686 aa31.4■■■□□ 2.62
SHISA4-203ENST00000481699 USP31Q70CQ4 1352 aa31.4■■■□□ 2.62
SHISA4-203ENST00000481699 ALS2Q96Q42 1657 aa31.39■■■□□ 2.62
SHISA4-203ENST00000481699 DIEXFQ68CQ4 756 aaKnown RBP31.39■■■□□ 2.62
SHISA4-203ENST00000481699 HAP1P54257 671 aaPredicted RBP31.38■■■□□ 2.61
SHISA4-203ENST00000481699 PNPLA6Q8IY17 1366 aa31.35■■■□□ 2.61
SHISA4-203ENST00000481699 JCADQ9P266 1359 aa31.35■■■□□ 2.61
SHISA4-203ENST00000481699 ANP32CO43423 234 aa31.35■■■□□ 2.61
SHISA4-203ENST00000481699 OVOS2A0A0J9YW53 1432 aa31.34■■■□□ 2.61
SHISA4-203ENST00000481699 OVOS2Q6IE36 1432 aa31.34■■■□□ 2.61
SHISA4-203ENST00000481699 SOX12O15370 315 aa31.33■■■□□ 2.61
SHISA4-203ENST00000481699 TNNT2P45379 298 aaPredicted RBP31.32■■■□□ 2.6
SHISA4-203ENST00000481699 POTEAQ6S8J7 498 aa31.32■■■□□ 2.6
SHISA4-203ENST00000481699 KCNH5Q8NCM2 988 aa31.32■■■□□ 2.6
SHISA4-203ENST00000481699 USP19O94966 1318 aa31.31■■■□□ 2.6
SHISA4-203ENST00000481699 CABLES1Q8TDN4 633 aa31.3■■■□□ 2.6
SHISA4-203ENST00000481699 ANKRD26Q9UPS8 1709 aa31.29■■■□□ 2.6
SHISA4-203ENST00000481699 RALBP1Q15311 655 aa31.29■■■□□ 2.6
SHISA4-203ENST00000481699 GCP02774 474 aa31.27■■■□□ 2.6
SHISA4-203ENST00000481699 USP54Q70EL1 1684 aa31.27■■■□□ 2.6
SHISA4-203ENST00000481699 SHPRHQ149N8 1683 aa31.25■■■□□ 2.59
SHISA4-203ENST00000481699 SLIT3O75094 1523 aa31.24■■■□□ 2.59
SHISA4-203ENST00000481699 COL22A1Q8NFW1 1626 aaPredicted RBP31.24■■■□□ 2.59
SHISA4-203ENST00000481699 NUTM2BA6NNL0 878 aaPredicted RBP31.24■■■□□ 2.59
SHISA4-203ENST00000481699 NUTM2EB1AL46 878 aaPredicted RBP31.24■■■□□ 2.59
SHISA4-203ENST00000481699 NUTM2AQ8IVF1 878 aaPredicted RBP31.24■■■□□ 2.59
SHISA4-203ENST00000481699 PRKRIP1Q9H875 184 aaPredicted RBP31.24■■■□□ 2.59
SHISA4-203ENST00000481699 PARD3Q8TEW0 1356 aa31.23■■■□□ 2.59
SHISA4-203ENST00000481699 ZBTB7CA1YPR0 619 aa31.23■■■□□ 2.59
SHISA4-203ENST00000481699 SPATA31A6Q5VVP1 1343 aa31.22■■■□□ 2.59
SHISA4-203ENST00000481699 MARF1Q9Y4F3 1742 aaKnown RBP31.21■■■□□ 2.59
SHISA4-203ENST00000481699 PHRF1Q9P1Y6 1649 aaKnown RBP31.2■■■□□ 2.59
SHISA4-203ENST00000481699 ZC3H6P61129 1189 aaKnown RBP31.2■■■□□ 2.59
SHISA4-203ENST00000481699 AATKQ6ZMQ8 1374 aa31.19■■■□□ 2.58
SHISA4-203ENST00000481699 MYBBP1AQ9BQG0 1328 aaKnown RBP31.17■■■□□ 2.58
SHISA4-203ENST00000481699 PPM1GO15355 546 aaPredicted RBP31.16■■■□□ 2.58
SHISA4-203ENST00000481699 FBLN1P23142 703 aa31.16■■■□□ 2.58
SHISA4-203ENST00000481699 RRS1Q15050 365 aaKnown RBP31.16■■■□□ 2.58
SHISA4-203ENST00000481699 NFAT5O94916 1531 aa31.15■■■□□ 2.58
SHISA4-203ENST00000481699 PPP2R1AP30153 589 aa31.15■■■□□ 2.58
SHISA4-203ENST00000481699 AMPHP49418 695 aa31.15■■■□□ 2.58
SHISA4-203ENST00000481699 CRYBG1Q9Y4K1 1723 aa31.15■■■□□ 2.58
SHISA4-203ENST00000481699 ADAMTS2O95450 1211 aa31.14■■■□□ 2.58
SHISA4-203ENST00000481699 PRDM11Q9NQV5 511 aa31.14■■■□□ 2.58
SHISA4-203ENST00000481699 ABCA3Q99758 1704 aa31.14■■■□□ 2.58
SHISA4-203ENST00000481699 MAP3K19Q56UN5 1328 aa31.13■■■□□ 2.57
SHISA4-203ENST00000481699 KIAA0232Q92628 1395 aa31.13■■■□□ 2.57
SHISA4-203ENST00000481699 MEX3CQ5U5Q3 659 aaKnown RBP31.12■■■□□ 2.57
SHISA4-203ENST00000481699 ARHGEF25Q86VW2 580 aa31.12■■■□□ 2.57
SHISA4-203ENST00000481699 POLKQ9UBT6 870 aa31.12■■■□□ 2.57
SHISA4-203ENST00000481699 CPDO75976 1380 aa31.11■■■□□ 2.57
SHISA4-203ENST00000481699 EMILIN1Q9Y6C2 1016 aa31.11■■■□□ 2.57
SHISA4-203ENST00000481699 MTHFSP49914 203 aa31.1■■■□□ 2.57
SHISA4-203ENST00000481699 CFAP53Q96M91 514 aa31.09■■■□□ 2.57
SHISA4-203ENST00000481699 CHRNA2Q15822 529 aa31.07■■■□□ 2.56
SHISA4-203ENST00000481699 RTL1A6NKG5 1358 aa31.06■■■□□ 2.56
SHISA4-203ENST00000481699 KIF24Q5T7B8 1368 aa31.06■■■□□ 2.56
SHISA4-203ENST00000481699 FLT4P35916 1363 aa31.05■■■□□ 2.56
SHISA4-203ENST00000481699 IP6K1Q92551 441 aa31.04■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms