RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 SKOR2Q2VWA4 1001 aaPredicted RBP25.84■■□□□ 1.73
COL13A1-208ENST00000479733 CIZ1Q9ULV3 898 aaPredicted RBP25.84■■□□□ 1.73
COL13A1-208ENST00000479733 SBNO2Q9Y2G9 1366 aa25.83■■□□□ 1.73
COL13A1-208ENST00000479733 GAS2L2Q8NHY3 880 aa25.83■■□□□ 1.73
COL13A1-208ENST00000479733 NASPP49321 788 aaPredicted RBP25.82■■□□□ 1.72
COL13A1-208ENST00000479733 DDX49Q9Y6V7 483 aaKnown RBP25.82■■□□□ 1.72
COL13A1-208ENST00000479733 KIAA1210Q9ULL0 1709 aa25.82■■□□□ 1.72
COL13A1-208ENST00000479733 IPO8O15397 1037 aaKnown RBP25.82■■□□□ 1.72
COL13A1-208ENST00000479733 CD109Q6YHK3 1445 aa25.82■■□□□ 1.72
COL13A1-208ENST00000479733 K7ELQ4 463 aaPredicted RBP25.81■■□□□ 1.72
COL13A1-208ENST00000479733 NCLP19338 710 aaKnown RBP25.81■■□□□ 1.72
COL13A1-208ENST00000479733 PLEKHF1Q96S99 279 aa25.81■■□□□ 1.72
COL13A1-208ENST00000479733 MYOM2P54296 1465 aa25.81■■□□□ 1.72
COL13A1-208ENST00000479733 KIAA1211Q6ZU35 1233 aa25.81■■□□□ 1.72
COL13A1-208ENST00000479733 TBC1D9Q6ZT07 1266 aa25.8■■□□□ 1.72
COL13A1-208ENST00000479733 BMP2KLQ5H9B9 411 aa25.79■■□□□ 1.72
COL13A1-208ENST00000479733 TET3O43151 1660 aa25.79■■□□□ 1.72
COL13A1-208ENST00000479733 ZFYVE16Q7Z3T8 1539 aa25.78■■□□□ 1.72
COL13A1-208ENST00000479733 C14orf93Q9H972 538 aaKnown RBP25.78■■□□□ 1.72
COL13A1-208ENST00000479733 GOLGA6L22H0YM25 854 aa25.77■■□□□ 1.72
COL13A1-208ENST00000479733 ANP32BQ92688 251 aaKnown RBP25.77■■□□□ 1.72
COL13A1-208ENST00000479733 KIF16BQ96L93 1317 aa25.77■■□□□ 1.72
COL13A1-208ENST00000479733 ELL2O00472 640 aaPredicted RBP25.76■■□□□ 1.71
COL13A1-208ENST00000479733 CCDC173Q0VFZ6 552 aa25.75■■□□□ 1.71
COL13A1-208ENST00000479733 EVC2Q86UK5 1308 aa25.75■■□□□ 1.71
COL13A1-208ENST00000479733 BAG4O95429 457 aaKnown RBP25.74■■□□□ 1.71
COL13A1-208ENST00000479733 MCTP1Q6DN14 999 aa25.74■■□□□ 1.71
COL13A1-208ENST00000479733 STK26Q9P289 416 aa25.73■■□□□ 1.71
COL13A1-208ENST00000479733 TPM2P07951 284 aa25.72■■□□□ 1.71
COL13A1-208ENST00000479733 MSNP26038 577 aaKnown RBP25.72■■□□□ 1.71
COL13A1-208ENST00000479733 SRPK2P78362 688 aaKnown RBP25.72■■□□□ 1.71
COL13A1-208ENST00000479733 RBM10P98175 930 aaKnown RBP25.72■■□□□ 1.71
COL13A1-208ENST00000479733 ZSCAN30Q86W11 494 aa25.72■■□□□ 1.71
COL13A1-208ENST00000479733 THUMPD2Q9BTF0 503 aaKnown RBP25.71■■□□□ 1.71
COL13A1-208ENST00000479733 CAVIN1Q6NZI2 390 aaKnown RBP25.71■■□□□ 1.71
COL13A1-208ENST00000479733 PTMSP20962 102 aa25.7■■□□□ 1.71
COL13A1-208ENST00000479733 NCBP3Q53F19 620 aaKnown RBP25.7■■□□□ 1.71
COL13A1-208ENST00000479733 ANKRD36BQ8N2N9 1353 aa25.7■■□□□ 1.71
COL13A1-208ENST00000479733 ABCC11Q96J66 1382 aa25.7■■□□□ 1.71
COL13A1-208ENST00000479733 ZBTB7BO15156 539 aaPredicted RBP25.7■■□□□ 1.7
COL13A1-208ENST00000479733 GGT6Q6P531 493 aa25.7■■□□□ 1.7
COL13A1-208ENST00000479733 KLHL40Q2TBA0 621 aa25.69■■□□□ 1.7
COL13A1-208ENST00000479733 PPP1R9BQ96SB3 815 aa25.69■■□□□ 1.7
COL13A1-208ENST00000479733 PPIP5K1Q6PFW1 1433 aa25.69■■□□□ 1.7
COL13A1-208ENST00000479733 FBLN1P23142 703 aa25.68■■□□□ 1.7
COL13A1-208ENST00000479733 KIF1BO60333 1816 aa25.68■■□□□ 1.7
COL13A1-208ENST00000479733 CFAP65Q6ZU64 1925 aaKnown RBP25.68■■□□□ 1.7
COL13A1-208ENST00000479733 MROH2AA6NES4 1674 aa25.67■■□□□ 1.7
COL13A1-208ENST00000479733 PKP1Q13835 747 aa25.67■■□□□ 1.7
COL13A1-208ENST00000479733 DEPDC5O75140 1603 aa25.67■■□□□ 1.7
COL13A1-208ENST00000479733 SIRT2Q8IXJ6 389 aa25.67■■□□□ 1.7
COL13A1-208ENST00000479733 GCC1Q96CN9 775 aa25.67■■□□□ 1.7
COL13A1-208ENST00000479733 QRICH2Q9H0J4 1663 aa25.66■■□□□ 1.7
COL13A1-208ENST00000479733 DIAPH1O60610 1272 aaKnown RBP25.66■■□□□ 1.7
COL13A1-208ENST00000479733 MYO3AQ8NEV4 1616 aa25.66■■□□□ 1.7
COL13A1-208ENST00000479733 ATP7AQ04656 1500 aa25.66■■□□□ 1.7
COL13A1-208ENST00000479733 TSPYL6Q8N831 410 aa25.66■■□□□ 1.7
COL13A1-208ENST00000479733 ADGRB2O60241 1585 aa25.65■■□□□ 1.7
COL13A1-208ENST00000479733 IL16Q14005 1332 aa25.65■■□□□ 1.7
COL13A1-208ENST00000479733 CALD1Q05682 793 aaKnown RBP25.65■■□□□ 1.7
COL13A1-208ENST00000479733 NRXN1Q9ULB1 1477 aa25.65■■□□□ 1.7
COL13A1-208ENST00000479733 ALDH1L2Q3SY69 923 aa25.64■■□□□ 1.7
COL13A1-208ENST00000479733 R3HCC1Q9Y3T6 440 aaKnown RBP25.64■■□□□ 1.7
COL13A1-208ENST00000479733 ADGRL1O94910 1474 aa25.64■■□□□ 1.7
COL13A1-208ENST00000479733 AK9Q5TCS8 1911 aa25.64■■□□□ 1.7
COL13A1-208ENST00000479733 A0A1W2PP64 1363 aa25.64■■□□□ 1.69
COL13A1-208ENST00000479733 CDC45O75419 566 aa25.64■■□□□ 1.69
COL13A1-208ENST00000479733 VWDEQ8N2E2 1590 aa25.63■■□□□ 1.69
COL13A1-208ENST00000479733 FYB1O15117 783 aa25.63■■□□□ 1.69
COL13A1-208ENST00000479733 PDCL3Q9H2J4 239 aa25.63■■□□□ 1.69
COL13A1-208ENST00000479733 OFD1O75665 1012 aa25.63■■□□□ 1.69
COL13A1-208ENST00000479733 CHAMP1Q96JM3 812 aa25.63■■□□□ 1.69
COL13A1-208ENST00000479733 NSD2O96028 1365 aa25.63■■□□□ 1.69
COL13A1-208ENST00000479733 ZCCHC11Q5TAX3 1644 aaKnown RBP25.62■■□□□ 1.69
COL13A1-208ENST00000479733 PRKAR2BP31323 418 aa25.62■■□□□ 1.69
COL13A1-208ENST00000479733 GSPT1P15170 499 aaKnown RBP25.61■■□□□ 1.69
COL13A1-208ENST00000479733 ZSCAN23Q3MJ62 389 aa25.61■■□□□ 1.69
COL13A1-208ENST00000479733 FAM13BQ9NYF5 915 aa25.61■■□□□ 1.69
COL13A1-208ENST00000479733 HMOX1P09601 288 aa25.61■■□□□ 1.69
COL13A1-208ENST00000479733 RBSNQ9H1K0 784 aa25.61■■□□□ 1.69
COL13A1-208ENST00000479733 RBM27Q9P2N5 1060 aaKnown RBP25.61■■□□□ 1.69
COL13A1-208ENST00000479733 ATAD2Q6PL18 1390 aa25.61■■□□□ 1.69
COL13A1-208ENST00000479733 C16orf71Q8IYS4 520 aaPredicted RBP25.6■■□□□ 1.69
COL13A1-208ENST00000479733 ARID3AQ99856 593 aa25.6■■□□□ 1.69
COL13A1-208ENST00000479733 APBB1O00213 710 aa25.6■■□□□ 1.69
COL13A1-208ENST00000479733 FOXD4L5Q5VV16 416 aaPredicted RBP25.6■■□□□ 1.69
COL13A1-208ENST00000479733 FOXD4L4Q8WXT5 416 aaPredicted RBP25.6■■□□□ 1.69
COL13A1-208ENST00000479733 PRPF40AO75400 957 aaKnown RBP25.6■■□□□ 1.69
COL13A1-208ENST00000479733 XPCQ01831 940 aaPredicted RBP25.6■■□□□ 1.69
COL13A1-208ENST00000479733 FANCAO15360 1455 aa25.6■■□□□ 1.69
COL13A1-208ENST00000479733 MINK1Q8N4C8 1332 aaPredicted RBP25.59■■□□□ 1.69
COL13A1-208ENST00000479733 VAMP4O75379 141 aa25.58■■□□□ 1.69
COL13A1-208ENST00000479733 PRIM1P49642 420 aaKnown RBP25.58■■□□□ 1.69
COL13A1-208ENST00000479733 MRPL50Q8N5N7 158 aaKnown RBP25.58■■□□□ 1.69
COL13A1-208ENST00000479733 ADGRB1O14514 1584 aa25.58■■□□□ 1.68
COL13A1-208ENST00000479733 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.57■■□□□ 1.68
COL13A1-208ENST00000479733 LMBRD1Q9NUN5 540 aa25.57■■□□□ 1.68
COL13A1-208ENST00000479733 ZGPATQ8N5A5 531 aaKnown RBP25.57■■□□□ 1.68
COL13A1-208ENST00000479733 PHACTR3Q96KR7 559 aa25.57■■□□□ 1.68
COL13A1-208ENST00000479733 EFCAB6Q5THR3 1501 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms